RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 N4BP3O15049 544 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 DGKIO75912 1065 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 ASMTLO95671 621 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 ASGR2P07307 311 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 COL6A2P12110 1019 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 SSPNQ14714 243 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 STEAP3Q658P3 488 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 GIMAP6Q6P9H5 292 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 MILR1Q7Z6M3 343 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 ALG1Q9BT22 464 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 MRPL4Q9BYD3 311 aaKnown RBP8.16□□□□□ -1.1
SSB-209ENST00000470621 KRTAP4-11Q9BYQ6 195 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 TRIM39Q9HCM9 518 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 FANCLQ9NW38 375 aa8.16□□□□□ -1.1
SSB-209ENST00000470621 CCDC163A0A0D9SF12 145 aa8.15□□□□□ -1.1
SSB-209ENST00000470621 NFIBO00712 420 aa8.15□□□□□ -1.1
SSB-209ENST00000470621 NKRFO15226 690 aaKnown RBP eCLIP8.15□□□□□ -1.1
SSB-209ENST00000470621 ATF2P15336 505 aa8.15□□□□□ -1.1
SSB-209ENST00000470621 TKFCQ3LXA3 575 aa8.15□□□□□ -1.1
SSB-209ENST00000470621 EMC4Q5J8M3 183 aa8.15□□□□□ -1.1
SSB-209ENST00000470621 OTOP3Q7RTS5 596 aa8.15□□□□□ -1.1
SSB-209ENST00000470621 NLGN1Q8N2Q7 840 aa8.15□□□□□ -1.1
SSB-209ENST00000470621 SMG5Q9UPR3 1016 aaKnown RBP8.15□□□□□ -1.1
SSB-209ENST00000470621 TBX22Q9Y458 520 aa8.15□□□□□ -1.1
SSB-209ENST00000470621 TCAF2A6NFQ2 919 aa8.14□□□□□ -1.11
SSB-209ENST00000470621 PLD2O14939 933 aa8.14□□□□□ -1.11
SSB-209ENST00000470621 BUB1BO60566 1050 aaPredicted RBP8.14□□□□□ -1.11
SSB-209ENST00000470621 TADA3O75528 432 aa8.14□□□□□ -1.11
SSB-209ENST00000470621 ZBTB7AO95365 584 aa8.14□□□□□ -1.11
SSB-209ENST00000470621 SRGAP2CP0DJJ0 459 aa8.14□□□□□ -1.11
SSB-209ENST00000470621 IGFBP6P24592 240 aaPredicted RBP8.14□□□□□ -1.11
SSB-209ENST00000470621 RBM12BQ8IXT5 1001 aaKnown RBP8.14□□□□□ -1.11
SSB-209ENST00000470621 TMEFF1Q8IYR6 380 aa8.14□□□□□ -1.11
SSB-209ENST00000470621 ARRDC4Q8NCT1 418 aa8.14□□□□□ -1.11
SSB-209ENST00000470621 PCDH19Q8TAB3 1148 aa8.14□□□□□ -1.11
SSB-209ENST00000470621 TOX2Q96NM4 488 aa8.14□□□□□ -1.11
SSB-209ENST00000470621 EPB41L4AQ9HCS5 686 aaPredicted RBP8.14□□□□□ -1.11
SSB-209ENST00000470621 ZNF652Q9Y2D9 606 aa8.14□□□□□ -1.11
SSB-209ENST00000470621 TCRBV5S2A0A599 114 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 FAM47E-STBD1D6RA91 191 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 IRS4O14654 1257 aaPredicted RBP8.13□□□□□ -1.11
SSB-209ENST00000470621 HGSO14964 777 aaPredicted RBP8.13□□□□□ -1.11
SSB-209ENST00000470621 EFCAB14O75071 495 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 PYGMP11217 842 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 GNAT1P11488 350 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 RAP1GAPP47736 663 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 LIMS1P48059 325 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 RBM10P98175 930 aaKnown RBP8.13□□□□□ -1.11
SSB-209ENST00000470621 PAK1Q13153 545 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 SLC9A5Q14940 896 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 C21orf62-AS1Q17RA5 79 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 NOP9Q86U38 636 aaKnown RBP8.13□□□□□ -1.11
SSB-209ENST00000470621 AMIGO3Q86WK7 504 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 PANK1Q8TE04 598 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 SYT3Q9BQG1 590 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 SLC6A20Q9NP91 592 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 MYOTQ9UBF9 498 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 PCDHB4Q9Y5E5 795 aa8.13□□□□□ -1.11
SSB-209ENST00000470621 TCRBV5S4A2TA0A5A2 114 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 NPIPB6E9PJ23 425 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 SLC27A2O14975 620 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 KCNQ2O43526 872 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 LTFP02788 710 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 PI3P19957 117 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 LINC00310P59036 64 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 KCNA10Q16322 511 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 HABP4Q5JVS0 413 aaKnown RBP8.12□□□□□ -1.11
SSB-209ENST00000470621 ABHD17CQ6PCB6 329 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 HOMER1Q86YM7 354 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 FAM26EQ8N5C1 309 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 SH3RF2Q8TEC5 729 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 SIGLEC10Q96LC7 697 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 CBLCQ9ULV8 474 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 COQ6Q9Y2Z9 468 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 TELO2Q9Y4R8 837 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 CD2APQ9Y5K6 639 aa8.12□□□□□ -1.11
SSB-209ENST00000470621 WNT9AO14904 365 aa8.11□□□□□ -1.11
SSB-209ENST00000470621 CKMP06732 381 aa8.11□□□□□ -1.11
SSB-209ENST00000470621 C8BP07358 591 aa8.11□□□□□ -1.11
SSB-209ENST00000470621 NCAM1P13591 858 aa8.11□□□□□ -1.11
SSB-209ENST00000470621 SDSP20132 328 aa8.11□□□□□ -1.11
SSB-209ENST00000470621 CFPP27918 469 aa8.11□□□□□ -1.11
SSB-209ENST00000470621 CHRNA2Q15822 529 aa8.11□□□□□ -1.11
SSB-209ENST00000470621 MIB1Q86YT6 1006 aa8.11□□□□□ -1.11
SSB-209ENST00000470621 C1QL4Q86Z23 238 aa8.11□□□□□ -1.11
SSB-209ENST00000470621 APPBP2Q92624 585 aa8.11□□□□□ -1.11
SSB-209ENST00000470621 IRAK3Q9Y616 596 aa8.11□□□□□ -1.11
SSB-209ENST00000470621 TCRBV16S1A1N1A0A5B0 115 aa8.1□□□□□ -1.11
SSB-209ENST00000470621 KRIT1O00522 736 aa8.1□□□□□ -1.11
SSB-209ENST00000470621 CDC45O75419 566 aa8.1□□□□□ -1.11
SSB-209ENST00000470621 DNAJC8O75937 253 aaPredicted RBP8.1□□□□□ -1.11
SSB-209ENST00000470621 STAT5AP42229 794 aa8.1□□□□□ -1.11
SSB-209ENST00000470621 PABPC4Q13310 644 aaKnown RBP eCLIP8.1□□□□□ -1.11
SSB-209ENST00000470621 FNDC3BQ53EP0 1204 aaKnown RBP8.1□□□□□ -1.11
SSB-209ENST00000470621 ETV3LQ6ZN32 361 aa8.1□□□□□ -1.11
SSB-209ENST00000470621 ZC3H7AQ8IWR0 971 aaKnown RBP8.1□□□□□ -1.11
SSB-209ENST00000470621 CISD2Q8N5K1 135 aaKnown RBP8.1□□□□□ -1.11
SSB-209ENST00000470621 SMARCC2Q8TAQ2 1214 aa8.1□□□□□ -1.11
SSB-209ENST00000470621 UHMK1Q8TAS1 419 aaKnown RBP8.1□□□□□ -1.11
SSB-209ENST00000470621 CD244Q9BZW8 370 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms