RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 C11orf74Q86VG3 221 aa7.28□□□□□ -1.24
RBM39-227ENST00000470563 WFDC3Q8IUB2 231 aa7.28□□□□□ -1.24
RBM39-227ENST00000470563 SMURF1Q9HCE7 757 aa7.28□□□□□ -1.24
RBM39-227ENST00000470563 CLDND1Q9NY35 253 aa7.28□□□□□ -1.24
RBM39-227ENST00000470563 ACSL6Q9UKU0 697 aa7.28□□□□□ -1.24
RBM39-227ENST00000470563 NUB1Q9Y5A7 615 aa7.28□□□□□ -1.24
RBM39-227ENST00000470563 SPO11Q9Y5K1 396 aa7.28□□□□□ -1.24
RBM39-227ENST00000470563 SLC12A8A0AV02 714 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 PTPDC1A2A3K4 754 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 GABRDO14764 452 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 NRDCO43847 1150 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 CLASP2O75122 1294 aaKnown RBP7.27□□□□□ -1.25
RBM39-227ENST00000470563 KATNA1O75449 491 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 KPNA1P52294 538 aaPredicted RBP7.27□□□□□ -1.25
RBM39-227ENST00000470563 EPHA5P54756 1037 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 IL2P60568 153 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 HLTFQ14527 1009 aaKnown RBP eCLIP7.27□□□□□ -1.25
RBM39-227ENST00000470563 ATP13A4Q4VNC1 1196 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 ANGEL2Q5VTE6 544 aaKnown RBP7.27□□□□□ -1.25
RBM39-227ENST00000470563 ZPBP2Q6X784 338 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 CNTD1Q8N815 330 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 C2orf69Q8N8R5 385 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 UHMK1Q8TAS1 419 aaKnown RBP7.27□□□□□ -1.25
RBM39-227ENST00000470563 BCL7CQ8WUZ0 217 aaPredicted RBP7.27□□□□□ -1.25
RBM39-227ENST00000470563 TRIM8Q9BZR9 551 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 SLC6A20Q9NP91 592 aa7.27□□□□□ -1.25
RBM39-227ENST00000470563 PPARGC1AQ9UBK2 798 aaKnown RBP7.27□□□□□ -1.25
RBM39-227ENST00000470563 G3BP2Q9UN86 482 aaKnown RBP7.27□□□□□ -1.25
RBM39-227ENST00000470563 TSPAN6O43657 245 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 RFPL1O75677 317 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 PRKD3O94806 890 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 AMY2AP04746 511 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 SRGAP2CP0DJJ0 459 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 AMY2BP19961 511 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 TMPRSS15P98073 1019 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 DOC2BQ14184 412 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 FAM50AQ14320 339 aaKnown RBP7.26□□□□□ -1.25
RBM39-227ENST00000470563 SKOR2Q2VWA4 1001 aaPredicted RBP7.26□□□□□ -1.25
RBM39-227ENST00000470563 GALNT18Q6P9A2 607 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 SPPL2CQ8IUH8 684 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 NOSTRINQ8IVI9 506 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 NLGN4XQ8N0W4 816 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 NXPE1Q8N323 547 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 PDZD8Q8NEN9 1154 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 PHOSPHO1Q8TCT1 267 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 DLG3Q92796 817 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 ALPK1Q96QP1 1244 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 JMJD8Q96S16 334 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 SPOCK3Q9BQ16 436 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 CDH19Q9H159 772 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 TMEM59LQ9UK28 342 aa7.26□□□□□ -1.25
RBM39-227ENST00000470563 PDE6AP16499 860 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 ID4P47928 161 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 PIN1Q13526 163 aaPredicted RBP7.25□□□□□ -1.25
RBM39-227ENST00000470563 LRRC32Q14392 662 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 CHRNA2Q15822 529 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 HSF5Q4G112 596 aaPredicted RBP7.25□□□□□ -1.25
RBM39-227ENST00000470563 NXNQ6DKJ4 435 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 CEP68Q76N32 757 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 PASD1Q8IV76 773 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 FMNL3Q8IVF7 1028 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 CBARPQ8N350 705 aaPredicted RBP7.25□□□□□ -1.25
RBM39-227ENST00000470563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.25□□□□□ -1.25
RBM39-227ENST00000470563 CHTF18Q8WVB6 975 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 SLC5A5Q92911 643 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 TRMT2BQ96GJ1 504 aaKnown RBP7.25□□□□□ -1.25
RBM39-227ENST00000470563 PDLIM7Q9NR12 457 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 SPTLC3Q9NUV7 552 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 OXSMQ9NWU1 459 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 TRHDEQ9UKU6 1024 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 SRPK3Q9UPE1 567 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 COA3Q9Y2R0 106 aaPredicted RBP7.25□□□□□ -1.25
RBM39-227ENST00000470563 B3GALT1Q9Y5Z6 326 aa7.25□□□□□ -1.25
RBM39-227ENST00000470563 TCRBV5S4A2TA0A5A2 114 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 FITM1A5D6W6 292 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 TRIM75PA6NK02 468 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 KIAA1324LA8MWY0 1029 aaPredicted RBP7.24□□□□□ -1.25
RBM39-227ENST00000470563 H7C1D1 291 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 MSTNO14793 375 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 KIF3BO15066 747 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 TGM5O43548 720 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 MAFKO60675 156 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 PPP1R11O60927 126 aaPredicted RBP7.24□□□□□ -1.25
RBM39-227ENST00000470563 DGKIO75912 1065 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 ABLIM3O94929 683 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 GNAT1P11488 350 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 SDHAP31040 664 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 HOXA10P31260 410 aaPredicted RBP7.24□□□□□ -1.25
RBM39-227ENST00000470563 GJA4P35212 333 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 DNM2P50570 870 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 ITKQ08881 620 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 IKZF1Q13422 519 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 CC2D1AQ6P1N0 951 aaPredicted RBP7.24□□□□□ -1.25
RBM39-227ENST00000470563 VSIG10LQ86VR7 867 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 DTX1Q86Y01 620 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 ZZZ3Q8IYH5 903 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 NETO2Q8NC67 525 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 CARS2Q9HA77 564 aaKnown RBP7.24□□□□□ -1.25
RBM39-227ENST00000470563 ACSS2Q9NR19 701 aa7.24□□□□□ -1.25
RBM39-227ENST00000470563 CATSPERZQ9NTU4 200 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms