RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 EIF2AK2P19525 551 aaKnown RBP13.34□□□□□ -0.27
HLA-C-206ENST00000470363 RFC2P35250 354 aa13.34□□□□□ -0.27
HLA-C-206ENST00000470363 FGD1P98174 961 aa13.34□□□□□ -0.27
HLA-C-206ENST00000470363 RBL2Q08999 1139 aa13.34□□□□□ -0.27
HLA-C-206ENST00000470363 TOB2Q14106 344 aaPredicted RBP13.34□□□□□ -0.27
HLA-C-206ENST00000470363 ARHGEF16Q5VV41 709 aa13.34□□□□□ -0.27
HLA-C-206ENST00000470363 GDF6Q6KF10 455 aaPredicted RBP13.34□□□□□ -0.27
HLA-C-206ENST00000470363 HSCBQ8IWL3 235 aa13.34□□□□□ -0.27
HLA-C-206ENST00000470363 DHX38Q92620 1227 aaKnown RBP13.34□□□□□ -0.27
HLA-C-206ENST00000470363 PCDHA11Q9Y5I1 949 aa13.34□□□□□ -0.27
HLA-C-206ENST00000470363 PCDHA1Q9Y5I3 950 aa13.34□□□□□ -0.27
HLA-C-206ENST00000470363 ATP2A2P16615 1042 aaKnown RBP13.33□□□□□ -0.28
HLA-C-206ENST00000470363 SP2Q02086 613 aa13.33□□□□□ -0.28
HLA-C-206ENST00000470363 PTGISQ16647 500 aa13.33□□□□□ -0.28
HLA-C-206ENST00000470363 FAM47CQ5HY64 1035 aa13.33□□□□□ -0.28
HLA-C-206ENST00000470363 MYSM1Q5VVJ2 828 aa13.33□□□□□ -0.28
HLA-C-206ENST00000470363 DEFB128Q7Z7B8 93 aa13.33□□□□□ -0.28
HLA-C-206ENST00000470363 IL31RAQ8NI17 732 aa13.33□□□□□ -0.28
HLA-C-206ENST00000470363 PPTC7Q8NI37 304 aa13.33□□□□□ -0.28
HLA-C-206ENST00000470363 PIGSQ96S52 555 aa13.33□□□□□ -0.28
HLA-C-206ENST00000470363 SLC28A3Q9HAS3 691 aa13.33□□□□□ -0.28
HLA-C-206ENST00000470363 PRDM6Q9NQX0 595 aa13.33□□□□□ -0.28
HLA-C-206ENST00000470363 IFIT3O14879 490 aaKnown RBP13.32□□□□□ -0.28
HLA-C-206ENST00000470363 DHX16O60231 1041 aaKnown RBP13.32□□□□□ -0.28
HLA-C-206ENST00000470363 LARGE1O95461 756 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 F2P00734 622 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 POU3F3P20264 500 aaPredicted RBP13.32□□□□□ -0.28
HLA-C-206ENST00000470363 HOXA13P31271 388 aaPredicted RBP13.32□□□□□ -0.28
HLA-C-206ENST00000470363 APOBRQ0VD83 1088 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 BFSP2Q13515 415 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 LAMC2Q13753 1193 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 BECN1Q14457 450 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 HIC1Q14526 733 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 PGM5Q15124 567 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 DGKDQ16760 1214 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 TRIM71Q2Q1W2 868 aaKnown RBP13.32□□□□□ -0.28
HLA-C-206ENST00000470363 TRAF7Q6Q0C0 670 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 PHOSPHO2Q8TCD6 241 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 BRF1Q92994 677 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 IPO9Q96P70 1041 aaKnown RBP13.32□□□□□ -0.28
HLA-C-206ENST00000470363 GTF2IRD1Q9UHL9 959 aa13.32□□□□□ -0.28
HLA-C-206ENST00000470363 PNMA6FA0A0J9YX94 578 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 K7ELQ4 463 aaPredicted RBP13.31□□□□□ -0.28
HLA-C-206ENST00000470363 PPFIA4O75335 1185 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 ARHGEF15O94989 841 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 TGFB3P10600 412 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 HSDL1Q3SXM5 330 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 TMEM67Q5HYA8 995 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 CELF3Q5SZQ8 465 aaKnown RBP13.31□□□□□ -0.28
HLA-C-206ENST00000470363 RAB11FIP4Q86YS3 637 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 AFAP1L1Q8TED9 768 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 GPKOWQ92917 476 aaPredicted RBP eCLIP13.31□□□□□ -0.28
HLA-C-206ENST00000470363 GAS2L1Q99501 681 aaPredicted RBP13.31□□□□□ -0.28
HLA-C-206ENST00000470363 C16orf70Q9BSU1 422 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 BCAS3Q9H6U6 928 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 HDAC6Q9UBN7 1215 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 TPCN1Q9ULQ1 816 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 NAP1L2Q9ULW6 460 aaPredicted RBP13.31□□□□□ -0.28
HLA-C-206ENST00000470363 MRVI1Q9Y6F6 885 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 FRMPD4Q14CM0 1322 aa13.31□□□□□ -0.28
HLA-C-206ENST00000470363 SCN5AQ14524 2016 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 TET1Q8NFU7 2136 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 MYO9BQ13459 2157 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 RBAK-RBAKDNI3L0D1 243 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 SH2B2O14492 632 aaPredicted RBP13.3□□□□□ -0.28
HLA-C-206ENST00000470363 NBNO60934 754 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 DTNBO60941 627 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 CXCL10P02778 98 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 CKBP12277 381 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 HOXC8P31273 242 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 PSEN2P49810 448 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 MRPS9P82933 396 aaKnown RBP13.3□□□□□ -0.28
HLA-C-206ENST00000470363 ME3Q16798 604 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 TCTN1Q2MV58 587 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 KCNV1Q6PIU1 500 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 WNT8BQ93098 351 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 TMX3Q96JJ7 454 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 MAP3K14Q99558 947 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 AGXT2Q9BYV1 514 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 BRPF3Q9ULD4 1205 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 LIMCH1Q9UPQ0 1083 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 KIAA1217Q5T5P2 1943 aa13.3□□□□□ -0.28
HLA-C-206ENST00000470363 EPOPA6NHQ4 379 aa13.29□□□□□ -0.28
HLA-C-206ENST00000470363 ZBBXA8MT70 800 aa13.29□□□□□ -0.28
HLA-C-206ENST00000470363 GCOM1H8Y6P7 765 aaPredicted RBP13.29□□□□□ -0.28
HLA-C-206ENST00000470363 BAIAP3O94812 1187 aa13.29□□□□□ -0.28
HLA-C-206ENST00000470363 CA3P07451 260 aa13.29□□□□□ -0.28
HLA-C-206ENST00000470363 POLR2MP0CAP2 368 aa13.29□□□□□ -0.28
HLA-C-206ENST00000470363 MYCLP12524 364 aaPredicted RBP13.29□□□□□ -0.28
HLA-C-206ENST00000470363 ACTN1P12814 892 aa13.29□□□□□ -0.28
HLA-C-206ENST00000470363 SELPP16109 830 aa13.29□□□□□ -0.28
HLA-C-206ENST00000470363 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
HLA-C-206ENST00000470363 MCM2P49736 904 aa13.29□□□□□ -0.28
HLA-C-206ENST00000470363 TAP1Q03518 808 aa13.29□□□□□ -0.28
HLA-C-206ENST00000470363 STK3Q13188 491 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms