RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 MTIF2P46199 727 aaKnown RBP8.93□□□□□ -0.98
SMC4-212ENST00000470240 MRPL12P52815 198 aaKnown RBP8.93□□□□□ -0.98
SMC4-212ENST00000470240 KRT83P78385 493 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 CBX1P83916 185 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 PPP2R3AQ06190 1150 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 GABPB1Q06547 395 aaPredicted RBP8.93□□□□□ -0.98
SMC4-212ENST00000470240 GOLGA8FQ08AF8 430 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 GOLGA8DPQ0D2H9 430 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 NR6A1Q15406 480 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 CALCRLQ16602 461 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 CCDC96Q2M329 555 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 NOM1Q5C9Z4 860 aaKnown RBP8.93□□□□□ -0.98
SMC4-212ENST00000470240 KRT79Q5XKE5 535 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 TRIM65Q6PJ69 517 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 TOGARAM2Q6ZUX3 1019 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 SV2BQ7L1I2 683 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 RASGRP2Q7LDG7 609 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 ADSSL1Q8N142 457 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 CSGALNACT2Q8N6G5 542 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 GPR161Q8N6U8 529 aaKnown RBP8.93□□□□□ -0.98
SMC4-212ENST00000470240 C4orf32Q8N8J7 132 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 STAMQ92783 540 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 HPS1Q92902 700 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 CEP95Q96GE4 821 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 CCDC17Q96LX7 622 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 TSG101Q99816 390 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 C7orf25Q9BPX7 421 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 VPS16Q9H269 839 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 ABHD10Q9NUJ1 306 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 KBTBD4Q9NVX7 518 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 TAB2Q9NYJ8 693 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.93□□□□□ -0.987e-44■■■■■ 137.4
SMC4-212ENST00000470240 DDX41Q9UJV9 622 aaKnown RBP8.93□□□□□ -0.98
SMC4-212ENST00000470240 LUC7L2Q9Y383 392 aaKnown RBP8.93□□□□□ -0.98
SMC4-212ENST00000470240 ATP6V0A2Q9Y487 856 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 DAGLAQ9Y4D2 1042 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 V9GYY5 206 aaPredicted RBP8.93□□□□□ -0.98
SMC4-212ENST00000470240 KDM3AQ9Y4C1 1321 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 QSER1Q2KHR3 1735 aa8.93□□□□□ -0.98
SMC4-212ENST00000470240 BAZ2BQ9UIF8 2168 aaKnown RBP8.92□□□□□ -0.98
SMC4-212ENST00000470240 PNMA6FA0A0J9YX94 578 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 SOWAHDA6NJG2 315 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 TEX33O43247 280 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 ATP8B1O43520 1251 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 CYTH3O43739 400 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 KIF20AO95235 890 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 GOLGA8HP0CJ92 632 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 PDHBP11177 359 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 CCNE1P24864 410 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 KRT9P35527 623 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 FAM193AP78312 1265 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 GTF2IP78347 998 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 GPS2Q13227 327 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 PICALMQ13492 652 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 SEPT2Q15019 361 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 IL17AQ16552 155 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 ERCC6LQ2NKX8 1250 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 FAM182BQ5T319 152 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 USP17L2Q6R6M4 530 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 NLGN1Q8N2Q7 840 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 GIMAP8Q8ND71 665 aaPredicted RBP8.92□□□□□ -0.98
SMC4-212ENST00000470240 FLAD1Q8NFF5 587 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 OR8K1Q8NGG5 319 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 TBCKQ8TEA7 893 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 CUL5Q93034 780 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 P2RX5Q93086 422 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 TEKT1Q969V4 418 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 GPR101Q96P66 508 aaPredicted RBP8.92□□□□□ -0.98
SMC4-212ENST00000470240 CARD6Q9BX69 1037 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 RIOX1Q9H6W3 641 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 VAT1LQ9HCJ6 419 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 LZTFL1Q9NQ48 299 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 MTMR4Q9NYA4 1195 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 LRWD1Q9UFC0 647 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 SERPINB13Q9UIV8 391 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 GDAQ9Y2T3 454 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 MRFAP1Q9Y605 127 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 PARP3Q9Y6F1 533 aa8.92□□□□□ -0.98
SMC4-212ENST00000470240 FRMPD2Q68DX3 1309 aaPredicted RBP8.91□□□□□ -0.98
SMC4-212ENST00000470240 PVALEFA0A1B0GWK0 134 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 POLRMTO00411 1230 aaKnown RBP8.91□□□□□ -0.98
SMC4-212ENST00000470240 MPHOSPH10O00566 681 aaKnown RBP8.91□□□□□ -0.98
SMC4-212ENST00000470240 ERLIN1O75477 346 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 TADA3O75528 432 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 GYPCP04921 128 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 TRIM21P19474 475 aaKnown RBP8.91□□□□□ -0.98
SMC4-212ENST00000470240 TECP42680 631 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 NOVP48745 357 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 SMCPP49901 116 aaPredicted RBP8.91□□□□□ -0.98
SMC4-212ENST00000470240 RHBDL3P58872 404 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 TRAF1Q13077 416 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 PSMD2Q13200 908 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 PDIA5Q14554 519 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 KIF4BQ2VIQ3 1234 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 TMEM259Q4ZIN3 620 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 COBLL1Q53SF7 1204 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 TEX35Q5T0J7 233 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 FBXO38Q6PIJ6 1188 aa8.91□□□□□ -0.98
SMC4-212ENST00000470240 DPP8Q6V1X1 898 aaPredicted RBP8.91□□□□□ -0.98
SMC4-212ENST00000470240 APTXQ7Z2E3 356 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms