RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 HOXA10P31260 410 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-209ENST00000470026 FKBP3Q00688 224 aaKnown RBP15.12■□□□□ 0.01
BRCA1-209ENST00000470026 LEKR1Q6ZMV7 388 aa15.12■□□□□ 0.01
BRCA1-209ENST00000470026 LRRC47Q8N1G4 583 aaKnown RBP15.12■□□□□ 0.01
BRCA1-209ENST00000470026 RNF10Q8N5U6 811 aaKnown RBP15.12■□□□□ 0.01
BRCA1-209ENST00000470026 GLIS3Q8NEA6 775 aa15.12■□□□□ 0.01
BRCA1-209ENST00000470026 SPATA4Q8NEY3 305 aa15.12■□□□□ 0.01
BRCA1-209ENST00000470026 RBM17Q96I25 401 aaKnown RBP15.12■□□□□ 0.01
BRCA1-209ENST00000470026 ALS2CR12Q96Q35 445 aa15.12■□□□□ 0.01
BRCA1-209ENST00000470026 NUCKS1Q9H1E3 243 aaKnown RBP15.12■□□□□ 0.01
BRCA1-209ENST00000470026 FAM204AQ9H8W3 233 aa15.12■□□□□ 0.01
BRCA1-209ENST00000470026 CEP72Q9P209 647 aa15.12■□□□□ 0.01
BRCA1-209ENST00000470026 SALL4Q9UJQ4 1053 aa15.12■□□□□ 0.01
BRCA1-209ENST00000470026 ATF5Q9Y2D1 282 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-209ENST00000470026 PCDHA2Q9Y5H9 948 aa15.12■□□□□ 0.01
BRCA1-209ENST00000470026 ARFGEF1Q9Y6D6 1849 aa15.12■□□□□ 0.01
BRCA1-209ENST00000470026 MYH10P35580 1976 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 AKR1B10O60218 316 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 NOL4O94818 638 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 TNFRSF8P28908 595 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 MAGEA1P43355 309 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 FAM196AQ6ZSG2 479 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 ADGRF4Q8IZF3 695 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 TSPYL1Q9H0U9 437 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 SWAP70Q9UH65 585 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 DDX25Q9UHL0 483 aaKnown RBP15.11■□□□□ 0.01
BRCA1-209ENST00000470026 COL4A3BPQ9Y5P4 624 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 TTLL1O95922 423 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 TNNT3P45378 269 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-209ENST00000470026 SLC20A2Q08357 652 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 CCDC70Q6NSX1 233 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 NAP1L4Q99733 375 aaKnown RBP15.11■□□□□ 0.01
BRCA1-209ENST00000470026 DEF6Q9H4E7 631 aa15.11■□□□□ 0.01
BRCA1-209ENST00000470026 UBR3Q6ZT12 1888 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 KDM3AQ9Y4C1 1321 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 TLR2O60603 784 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 PHACTR2O75167 634 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 ZMYND10O75800 440 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 GNA14O95837 355 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 TNNI2P48788 182 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 LRRC41Q15345 812 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 FAM26FQ5R3K3 315 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 DPP8Q6V1X1 898 aaPredicted RBP15.1■□□□□ 0.01
BRCA1-209ENST00000470026 CUL5Q93034 780 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 TLR10Q9BXR5 811 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 NT5C3AQ9H0P0 336 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 MRPL12P52815 198 aaKnown RBP15.1■□□□□ 0.01
BRCA1-209ENST00000470026 UBE2SQ16763 222 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 GPATCH4Q5T3I0 446 aaKnown RBP15.1■□□□□ 0.01
BRCA1-209ENST00000470026 KLHDC7AQ5VTJ3 777 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 TRIM59Q8IWR1 403 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 AFAP1L1Q8TED9 768 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 MBOAT7Q96N66 472 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 CRAMP1Q96RY5 1269 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 LRRC1Q9BTT6 524 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 GPCPD1Q9NPB8 672 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 DDX4Q9NQI0 724 aaKnown RBP15.1■□□□□ 0.01
BRCA1-209ENST00000470026 PANK4Q9NVE7 773 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 RNF14Q9UBS8 474 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 DMGDHQ9UI17 866 aaKnown RBP15.1■□□□□ 0.01
BRCA1-209ENST00000470026 TSKSQ9UJT2 592 aa15.1■□□□□ 0.01
BRCA1-209ENST00000470026 FRMD3A2A2Y4 597 aa15.09■□□□□ 0.01
BRCA1-209ENST00000470026 KLRG2A4D1S0 409 aaPredicted RBP15.09■□□□□ 0.01
BRCA1-209ENST00000470026 SHMT1P34896 483 aa15.09■□□□□ 0.01
BRCA1-209ENST00000470026 GGCXP38435 758 aa15.09■□□□□ 0.01
BRCA1-209ENST00000470026 NFRKBQ6P4R8 1299 aa15.09■□□□□ 0.01
BRCA1-209ENST00000470026 LRRC31Q6UY01 552 aa15.09■□□□□ 0.01
BRCA1-209ENST00000470026 GSPT2Q8IYD1 628 aaKnown RBP15.09■□□□□ 0.01
BRCA1-209ENST00000470026 HDAC7Q8WUI4 952 aa15.09■□□□□ 0.01
BRCA1-209ENST00000470026 ZBTB5O15062 677 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 SHOX2O60902 331 aaPredicted RBP15.08■□□□□ 0.01
BRCA1-209ENST00000470026 SERPING1P05155 500 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 GYS1P13807 737 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 GFPT1Q06210 699 aaPredicted RBP15.08■□□□□ 0.01
BRCA1-209ENST00000470026 EZH2Q15910 746 aaKnown RBP15.08■□□□□ 0.01
BRCA1-209ENST00000470026 FAM83BQ5T0W9 1011 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 HAUS3Q68CZ6 603 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 TTBK2Q6IQ55 1244 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 CACNA2D4Q7Z3S7 1137 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 SRLQ86TD4 932 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 NOX5Q96PH1 765 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 SH3GL2Q99962 352 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 CRACR2AQ9BSW2 395 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 KCTD10Q9H3F6 313 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 KCNMB3Q9NPA1 279 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 SERPINB13Q9UIV8 391 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 PCDHA12Q9UN75 941 aa15.08■□□□□ 0.01
BRCA1-209ENST00000470026 CYP3A7-CYP3A51PA0A087WV96 503 aa15.08■□□□□ 0
BRCA1-209ENST00000470026 SERPINB2P05120 415 aa15.08■□□□□ 0
BRCA1-209ENST00000470026 CYP3A7P24462 503 aa15.08■□□□□ 0
BRCA1-209ENST00000470026 SLC1A4P43007 532 aa15.08■□□□□ 0
BRCA1-209ENST00000470026 SLC9C1Q4G0N8 1177 aa15.08■□□□□ 0
BRCA1-209ENST00000470026 GLE1Q53GS7 698 aaKnown RBP15.08■□□□□ 0
BRCA1-209ENST00000470026 CLEC10AQ8IUN9 316 aa15.08■□□□□ 0
BRCA1-209ENST00000470026 NGLY1Q96IV0 654 aa15.08■□□□□ 0
BRCA1-209ENST00000470026 FGFBP2Q9BYJ0 223 aa15.08■□□□□ 0
BRCA1-209ENST00000470026 GLT8D2Q9H1C3 349 aa15.08■□□□□ 0
BRCA1-209ENST00000470026 FEZ2Q9UHY8 353 aaPredicted RBP15.08■□□□□ 0
BRCA1-209ENST00000470026 MYH4Q9Y623 1939 aa15.08■□□□□ 0
BRCA1-209ENST00000470026 TRAF5O00463 557 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms