RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 MTMR1Q13613 665 aa23.56■■□□□ 1.36
BRAF-202ENST00000469930 OTOP1Q7RTM1 612 aa23.56■■□□□ 1.36
BRAF-202ENST00000469930 SLFN12Q8IYM2 578 aa23.56■■□□□ 1.36
BRAF-202ENST00000469930 KCNG4Q8TDN1 519 aa23.56■■□□□ 1.36
BRAF-202ENST00000469930 WDR11Q9BZH6 1224 aa23.56■■□□□ 1.36
BRAF-202ENST00000469930 KCNH7Q9NS40 1196 aa23.56■■□□□ 1.36
BRAF-202ENST00000469930 HSPA1AP0DMV8 641 aaKnown RBP23.55■■□□□ 1.36
BRAF-202ENST00000469930 HSPA1BP0DMV9 641 aaKnown RBP23.55■■□□□ 1.36
BRAF-202ENST00000469930 TAPT1Q6NXT6 567 aa23.55■■□□□ 1.36
BRAF-202ENST00000469930 SLC5A5Q92911 643 aa23.55■■□□□ 1.36
BRAF-202ENST00000469930 RIT2Q99578 217 aa23.55■■□□□ 1.36
BRAF-202ENST00000469930 TMEM60Q9H2L4 133 aa23.55■■□□□ 1.36
BRAF-202ENST00000469930 ELP1O95163 1332 aa23.55■■□□□ 1.36
BRAF-202ENST00000469930 KIAA1217Q5T5P2 1943 aa23.55■■□□□ 1.36
BRAF-202ENST00000469930 MSH4O15457 936 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 ECM2O94769 699 aaPredicted RBP23.54■■□□□ 1.36
BRAF-202ENST00000469930 OR52Z1P0C646 297 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 ARP10275 920 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 SEMA3FQ13275 785 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 STK38Q15208 465 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 CALCRLQ16602 461 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 CCL14Q16627 93 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 CSPP1Q1MSJ5 1256 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 FOXD4L6Q3SYB3 417 aaPredicted RBP23.54■■□□□ 1.36
BRAF-202ENST00000469930 MFSD14CQ5VZR4 134 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 CCDC62Q6P9F0 684 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 FOXD4L3Q6VB84 417 aaPredicted RBP23.54■■□□□ 1.36
BRAF-202ENST00000469930 POTEDQ86YR6 584 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 SCFD2Q8WU76 684 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 LEO1Q8WVC0 666 aaPredicted RBP23.54■■□□□ 1.36
BRAF-202ENST00000469930 HAS1Q92839 578 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 FERMT2Q96AC1 680 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 GBP4Q96PP9 640 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 FTOQ9C0B1 505 aaKnown RBP eCLIP23.54■■□□□ 1.36
BRAF-202ENST00000469930 AGO4Q9HCK5 861 aaKnown RBP23.54■■□□□ 1.36
BRAF-202ENST00000469930 NFASCO94856 1347 aa23.54■■□□□ 1.36
BRAF-202ENST00000469930 SPTLC2O15270 562 aa23.53■■□□□ 1.36
BRAF-202ENST00000469930 ACVR2BQ13705 512 aa23.53■■□□□ 1.36
BRAF-202ENST00000469930 IQSEC1Q6DN90 963 aa23.53■■□□□ 1.36
BRAF-202ENST00000469930 TMEM87AQ8NBN3 555 aa23.53■■□□□ 1.36
BRAF-202ENST00000469930 GIMAP8Q8ND71 665 aaPredicted RBP23.53■■□□□ 1.36
BRAF-202ENST00000469930 SLAIN1Q8ND83 568 aa23.53■■□□□ 1.36
BRAF-202ENST00000469930 TRIB2Q92519 343 aa23.53■■□□□ 1.36
BRAF-202ENST00000469930 TBC1D22BQ9NU19 505 aa23.53■■□□□ 1.36
BRAF-202ENST00000469930 CNPY2Q9Y2B0 182 aa23.53■■□□□ 1.36
BRAF-202ENST00000469930 TRIM17Q9Y577 477 aa23.53■■□□□ 1.36
BRAF-202ENST00000469930 SRPRBQ9Y5M8 271 aaKnown RBP23.53■■□□□ 1.36
BRAF-202ENST00000469930 PCNTO95613 3336 aa23.53■■□□□ 1.36
BRAF-202ENST00000469930 IPO5O00410 1097 aaKnown RBP23.52■■□□□ 1.36
BRAF-202ENST00000469930 ADCY3O60266 1144 aa23.52■■□□□ 1.36
BRAF-202ENST00000469930 ZNF865P0CJ78 1059 aaPredicted RBP23.52■■□□□ 1.36
BRAF-202ENST00000469930 RAET1EQ8TD07 263 aa23.52■■□□□ 1.36
BRAF-202ENST00000469930 SPATA32Q96LK8 384 aa23.52■■□□□ 1.36
BRAF-202ENST00000469930 ZNF577Q9BSK1 485 aa23.52■■□□□ 1.36
BRAF-202ENST00000469930 DDX41Q9UJV9 622 aaKnown RBP23.52■■□□□ 1.36
BRAF-202ENST00000469930 PTPN22Q9Y2R2 807 aa23.52■■□□□ 1.36
BRAF-202ENST00000469930 DDX49Q9Y6V7 483 aaKnown RBP23.52■■□□□ 1.36
BRAF-202ENST00000469930 TCHHQ07283 1943 aa23.51■■□□□ 1.35
BRAF-202ENST00000469930 DHX15O43143 795 aaKnown RBP23.51■■□□□ 1.35
BRAF-202ENST00000469930 PSMD10O75832 226 aa23.51■■□□□ 1.35
BRAF-202ENST00000469930 HMGCRP04035 888 aa23.51■■□□□ 1.35
BRAF-202ENST00000469930 KCNA2P16389 499 aa23.51■■□□□ 1.35
BRAF-202ENST00000469930 FXR2P51116 673 aaKnown RBP eCLIP23.51■■□□□ 1.35
BRAF-202ENST00000469930 CEBPZQ03701 1054 aaKnown RBP23.51■■□□□ 1.35
BRAF-202ENST00000469930 PDIA5Q14554 519 aa23.51■■□□□ 1.35
BRAF-202ENST00000469930 TTLL4Q14679 1199 aa23.51■■□□□ 1.35
BRAF-202ENST00000469930 MAP3K21Q5TCX8 1036 aa23.51■■□□□ 1.35
BRAF-202ENST00000469930 B3GNT9Q6UX72 402 aa23.51■■□□□ 1.35
BRAF-202ENST00000469930 ZNF579Q8NAF0 562 aaKnown RBP23.51■■□□□ 1.35
BRAF-202ENST00000469930 ZFP91Q96JP5 570 aaPredicted RBP23.51■■□□□ 1.35
BRAF-202ENST00000469930 MCM3APO60318 1980 aa23.51■■□□□ 1.35
BRAF-202ENST00000469930 NKRFO15226 690 aaKnown RBP eCLIP23.5■■□□□ 1.351e-8■■□□□ 11.7
BRAF-202ENST00000469930 NCLP19338 710 aaKnown RBP23.5■■□□□ 1.35
BRAF-202ENST00000469930 CYP2C19P33261 490 aa23.5■■□□□ 1.35
BRAF-202ENST00000469930 NEDD9Q14511 834 aa23.5■■□□□ 1.35
BRAF-202ENST00000469930 DTHD1Q6ZMT9 781 aa23.5■■□□□ 1.35
BRAF-202ENST00000469930 SEPT14Q6ZU15 432 aa23.5■■□□□ 1.35
BRAF-202ENST00000469930 FBXO16Q8IX29 292 aaPredicted RBP23.5■■□□□ 1.35
BRAF-202ENST00000469930 CHAMP1Q96JM3 812 aa23.5■■□□□ 1.35
BRAF-202ENST00000469930 FBXO2Q9UK22 296 aaPredicted RBP23.5■■□□□ 1.35
BRAF-202ENST00000469930 PCDHA12Q9UN75 941 aa23.5■■□□□ 1.35
BRAF-202ENST00000469930 MRVI1Q9Y6F6 885 aa23.5■■□□□ 1.35
BRAF-202ENST00000469930 ATP9AO75110 1047 aa23.49■■□□□ 1.35
BRAF-202ENST00000469930 CYBAP13498 195 aa23.49■■□□□ 1.35
BRAF-202ENST00000469930 PKN2Q16513 984 aaKnown RBP23.49■■□□□ 1.35
BRAF-202ENST00000469930 CTU1Q7Z7A3 348 aaKnown RBP23.49■■□□□ 1.35
BRAF-202ENST00000469930 IGSF22Q8N9C0 903 aa23.49■■□□□ 1.35
BRAF-202ENST00000469930 KRI1Q8N9T8 703 aaKnown RBP23.49■■□□□ 1.35
BRAF-202ENST00000469930 MARCH6O60337 910 aa23.48■■□□□ 1.35
BRAF-202ENST00000469930 CUTAO60888 179 aa23.48■■□□□ 1.35
BRAF-202ENST00000469930 LONP1P36776 959 aaKnown RBP23.48■■□□□ 1.35
BRAF-202ENST00000469930 LBX1P52954 281 aa23.48■■□□□ 1.35
BRAF-202ENST00000469930 SPIRE1Q08AE8 756 aa23.48■■□□□ 1.35
BRAF-202ENST00000469930 ITGB3BPQ13352 177 aaPredicted RBP23.48■■□□□ 1.35
BRAF-202ENST00000469930 PPP2R5CQ13362 524 aa23.48■■□□□ 1.35
BRAF-202ENST00000469930 IL17AQ16552 155 aa23.48■■□□□ 1.35
BRAF-202ENST00000469930 DUSP28Q4G0W2 176 aa23.48■■□□□ 1.35
BRAF-202ENST00000469930 ADALQ6DHV7 355 aa23.48■■□□□ 1.35
BRAF-202ENST00000469930 EEPD1Q7L9B9 569 aa23.48■■□□□ 1.35
BRAF-202ENST00000469930 EMID1Q96A84 441 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms