RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 KCNB1Q14721 858 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 LRCH2Q5VUJ6 765 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 ENOX1Q8TC92 643 aaKnown RBP20.32■□□□□ 0.84
SMC4-211ENST00000469858 MXRA8Q9BRK3 442 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 ZNF408Q9H9D4 720 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 KIAA1024Q9UPX6 916 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 GDAQ9Y2T3 454 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 SYNRGQ9UMZ2 1314 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 MEIS1O00470 390 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 MED24O75448 989 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 ARP10275 920 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 ATP1A3P13637 1013 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 EIF2AK2P19525 551 aaKnown RBP20.32■□□□□ 0.84
SMC4-211ENST00000469858 HS1BP3Q53T59 392 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 CT47A1Q5JQC4 288 aaPredicted RBP20.32■□□□□ 0.84
SMC4-211ENST00000469858 DRC7Q8IY82 874 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 PROCA1Q8NCQ7 364 aaPredicted RBP20.32■□□□□ 0.84
SMC4-211ENST00000469858 OPTNQ96CV9 577 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 MED15Q96RN5 788 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 NFE2L3Q9Y4A8 694 aa20.32■□□□□ 0.84
SMC4-211ENST00000469858 A0A0G2JMZ2 1700 aa20.31■□□□□ 0.84
SMC4-211ENST00000469858 TRAF5O00463 557 aa20.31■□□□□ 0.84
SMC4-211ENST00000469858 CXCL11O14625 94 aa20.31■□□□□ 0.84
SMC4-211ENST00000469858 STX17P56962 302 aa20.31■□□□□ 0.84
SMC4-211ENST00000469858 BAATQ14032 418 aaPredicted RBP20.31■□□□□ 0.84
SMC4-211ENST00000469858 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.31■□□□□ 0.84
SMC4-211ENST00000469858 SLC5A5Q92911 643 aa20.31■□□□□ 0.84
SMC4-211ENST00000469858 PURBQ96QR8 312 aaKnown RBP20.31■□□□□ 0.84
SMC4-211ENST00000469858 RMDN3Q96TC7 470 aa20.31■□□□□ 0.84
SMC4-211ENST00000469858 ZNF577Q9BSK1 485 aa20.31■□□□□ 0.84
SMC4-211ENST00000469858 CTNND2Q9UQB3 1225 aa20.31■□□□□ 0.84
SMC4-211ENST00000469858 FRMPD4Q14CM0 1322 aa20.31■□□□□ 0.84
SMC4-211ENST00000469858 MYMKA6NI61 221 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 SLC26A4O43511 780 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 RHOBTB3O94955 611 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 ITGB5P18084 799 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 PPIL2Q13356 520 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 PCNX4Q63HM2 1172 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 CCDC47Q96A33 483 aaKnown RBP20.3■□□□□ 0.84
SMC4-211ENST00000469858 MRFAP1L1Q96HT8 127 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 EXOC1Q9NV70 894 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 POTEFA5A3E0 1075 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 E9PMD0 336 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 GAS7O60861 476 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 PSMD10O75832 226 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 PGM5Q15124 567 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 HSP90AA4PQ58FG1 418 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 POTEGQ6S5H5 508 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 POTEEQ6S8J3 1075 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 CATSPER3Q86XQ3 398 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 ACAD9Q9H845 621 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 PXMP2Q9NR77 195 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 IFNKQ9P0W0 207 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 KCNH4Q9UQ05 1017 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 MAPK8IP1Q9UQF2 711 aa20.3■□□□□ 0.84
SMC4-211ENST00000469858 EML1O00423 815 aa20.29■□□□□ 0.84
SMC4-211ENST00000469858 CHMP2AO43633 222 aa20.29■□□□□ 0.84
SMC4-211ENST00000469858 SSBP05455 408 aaKnown RBP eCLIP20.29■□□□□ 0.849e-17■■■■■ 55.5
SMC4-211ENST00000469858 HOXA7P31268 230 aaPredicted RBP20.29■□□□□ 0.84
SMC4-211ENST00000469858 IRX3P78415 501 aaPredicted RBP20.29■□□□□ 0.84
SMC4-211ENST00000469858 MRPS9P82933 396 aaKnown RBP20.29■□□□□ 0.84
SMC4-211ENST00000469858 FANCCQ00597 558 aa20.29■□□□□ 0.84
SMC4-211ENST00000469858 PDE4DQ08499 809 aa20.29■□□□□ 0.84
SMC4-211ENST00000469858 TKFCQ3LXA3 575 aa20.29■□□□□ 0.84
SMC4-211ENST00000469858 ARHGEF16Q5VV41 709 aa20.29■□□□□ 0.84
SMC4-211ENST00000469858 OTOP1Q7RTM1 612 aa20.29■□□□□ 0.84
SMC4-211ENST00000469858 DYMQ7RTS9 669 aa20.29■□□□□ 0.84
SMC4-211ENST00000469858 WDR11Q9BZH6 1224 aa20.29■□□□□ 0.84
SMC4-211ENST00000469858 STK24Q9Y6E0 443 aa20.29■□□□□ 0.84
SMC4-211ENST00000469858 GOLGA6L6A8MZA4 724 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 IPO5O00410 1097 aaKnown RBP20.28■□□□□ 0.84
SMC4-211ENST00000469858 MYCLP12524 364 aaPredicted RBP20.28■□□□□ 0.84
SMC4-211ENST00000469858 RPA1P27694 616 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 CDC25BP30305 580 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 PRCPP42785 496 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 CYP4A11Q02928 519 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 PPP2R5CQ13362 524 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 LBX2Q6XYB7 198 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 PDCD2LQ9BRP1 358 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 XPO4Q9C0E2 1151 aaKnown RBP20.28■□□□□ 0.84
SMC4-211ENST00000469858 LRRC27Q9C0I9 530 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 PKD2L1Q9P0L9 805 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 PEX10O60683 326 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 SPATA31C1P0DKV0 1188 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 SEMA3FQ13275 785 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 LDLRAD1Q5T700 205 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 DDX12PQ92771 950 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 EIF2AK1Q9BQI3 630 aaKnown RBP20.28■□□□□ 0.84
SMC4-211ENST00000469858 RRAGCQ9HB90 399 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 KCNH7Q9NS40 1196 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 UBIAD1Q9Y5Z9 338 aa20.28■□□□□ 0.84
SMC4-211ENST00000469858 SERPINC1P01008 464 aa20.27■□□□□ 0.84
SMC4-211ENST00000469858 PLA2G4BP0C869 781 aa20.27■□□□□ 0.84
SMC4-211ENST00000469858 BCRP11274 1271 aa20.27■□□□□ 0.84
SMC4-211ENST00000469858 PAK1Q13153 545 aa20.27■□□□□ 0.84
SMC4-211ENST00000469858 SPATA1Q5VX52 437 aa20.27■□□□□ 0.84
SMC4-211ENST00000469858 NIPA1Q7RTP0 329 aa20.27■□□□□ 0.84
SMC4-211ENST00000469858 GIMAP8Q8ND71 665 aaPredicted RBP20.27■□□□□ 0.84
SMC4-211ENST00000469858 TEKT3Q9BXF9 490 aa20.27■□□□□ 0.84
SMC4-211ENST00000469858 A1CFQ9NQ94 594 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms