RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 FPGSQ05932 587 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 Q6ZUG5 572 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
MRPL28-208ENST00000469744 LLPHQ9BRT6 129 aaKnown RBP20.18■□□□□ 0.82
MRPL28-208ENST00000469744 SORBS3O60504 671 aa20.17■□□□□ 0.82
MRPL28-208ENST00000469744 B4GALT4O60513 344 aa20.17■□□□□ 0.82
MRPL28-208ENST00000469744 EIF3JO75822 258 aaKnown RBP20.17■□□□□ 0.82
MRPL28-208ENST00000469744 TRAF1Q13077 416 aa20.17■□□□□ 0.82
MRPL28-208ENST00000469744 PGM5Q15124 567 aa20.17■□□□□ 0.82
MRPL28-208ENST00000469744 NECAB1Q8N987 351 aa20.17■□□□□ 0.82
MRPL28-208ENST00000469744 AFG1LQ8WV93 481 aa20.17■□□□□ 0.82
MRPL28-208ENST00000469744 GTF3C6Q969F1 213 aa20.17■□□□□ 0.82
MRPL28-208ENST00000469744 SEC63Q9UGP8 760 aaKnown RBP20.17■□□□□ 0.82
MRPL28-208ENST00000469744 MTMR6Q9Y217 621 aa20.17■□□□□ 0.82
MRPL28-208ENST00000469744 UMODL1Q5DID0 1318 aa20.16■□□□□ 0.82
MRPL28-208ENST00000469744 A6NJR5 290 aa20.16■□□□□ 0.82
MRPL28-208ENST00000469744 GH1P01241 217 aa20.16■□□□□ 0.82
MRPL28-208ENST00000469744 CALM1P0DP23 149 aa20.16■□□□□ 0.82
MRPL28-208ENST00000469744 CALM2P0DP24 149 aa20.16■□□□□ 0.82
MRPL28-208ENST00000469744 CALM3P0DP25 149 aa20.16■□□□□ 0.82
MRPL28-208ENST00000469744 CYP2C18P33260 490 aa20.16■□□□□ 0.82
MRPL28-208ENST00000469744 CHMP4BP1P59074 171 aa20.16■□□□□ 0.82
MRPL28-208ENST00000469744 ARHGAP1Q07960 439 aa20.16■□□□□ 0.82
MRPL28-208ENST00000469744 CSPP1Q1MSJ5 1256 aa20.16■□□□□ 0.82
MRPL28-208ENST00000469744 BRDTQ58F21 947 aaPredicted RBP20.16■□□□□ 0.82
MRPL28-208ENST00000469744 MTG1Q9BT17 334 aaPredicted RBP20.16■□□□□ 0.82
MRPL28-208ENST00000469744 MAP3K20Q9NYL2 800 aaKnown RBP20.16■□□□□ 0.82
MRPL28-208ENST00000469744 MRVI1Q9Y6F6 885 aa20.16■□□□□ 0.82
MRPL28-208ENST00000469744 PFKFB2O60825 505 aa20.15■□□□□ 0.82
MRPL28-208ENST00000469744 RGS20O76081 388 aa20.15■□□□□ 0.82
MRPL28-208ENST00000469744 GNAQP50148 359 aa20.15■□□□□ 0.82
MRPL28-208ENST00000469744 FAM47CQ5HY64 1035 aa20.15■□□□□ 0.82
MRPL28-208ENST00000469744 FOXD4L5Q5VV16 416 aaPredicted RBP20.15■□□□□ 0.82
MRPL28-208ENST00000469744 APOA5Q6Q788 366 aa20.15■□□□□ 0.82
MRPL28-208ENST00000469744 SGMS1Q86VZ5 419 aa20.15■□□□□ 0.82
MRPL28-208ENST00000469744 DEFB123Q8N688 67 aa20.15■□□□□ 0.82
MRPL28-208ENST00000469744 FANCBQ8NB91 859 aa20.15■□□□□ 0.82
MRPL28-208ENST00000469744 FOXD4L4Q8WXT5 416 aaPredicted RBP20.15■□□□□ 0.82
MRPL28-208ENST00000469744 LZTS2Q9BRK4 669 aa20.15■□□□□ 0.82
MRPL28-208ENST00000469744 TRMT13Q9NUP7 481 aaKnown RBP20.15■□□□□ 0.82
MRPL28-208ENST00000469744 DDX41Q9UJV9 622 aaKnown RBP20.15■□□□□ 0.82
MRPL28-208ENST00000469744 BRPF3Q9ULD4 1205 aa20.15■□□□□ 0.82
MRPL28-208ENST00000469744 MMP3P08254 477 aa20.14■□□□□ 0.81
MRPL28-208ENST00000469744 CSF2RAP15509 400 aa20.14■□□□□ 0.81
MRPL28-208ENST00000469744 NBPF20Q3BBV1 942 aa20.14■□□□□ 0.81
MRPL28-208ENST00000469744 MFSD5Q6N075 450 aa20.14■□□□□ 0.81
MRPL28-208ENST00000469744 USP17L6PQ6QN14 398 aa20.14■□□□□ 0.81
MRPL28-208ENST00000469744 TMTC3Q6ZXV5 915 aa20.14■□□□□ 0.81
MRPL28-208ENST00000469744 VSIG10LQ86VR7 867 aa20.14■□□□□ 0.81
MRPL28-208ENST00000469744 SAMD3Q8N6K7 520 aa20.14■□□□□ 0.81
MRPL28-208ENST00000469744 GPT2Q8TD30 523 aa20.14■□□□□ 0.81
MRPL28-208ENST00000469744 RNPC3Q96LT9 517 aaKnown RBP20.14■□□□□ 0.81
MRPL28-208ENST00000469744 HIPK3Q9H422 1215 aa20.14■□□□□ 0.81
MRPL28-208ENST00000469744 COL6A3P12111 3177 aa20.13■□□□□ 0.81
MRPL28-208ENST00000469744 NCLP19338 710 aaKnown RBP20.13■□□□□ 0.81
MRPL28-208ENST00000469744 SMARCA1P28370 1054 aa20.13■□□□□ 0.81
MRPL28-208ENST00000469744 CCND2P30279 289 aa20.13■□□□□ 0.81
MRPL28-208ENST00000469744 EVCP57679 992 aa20.13■□□□□ 0.81
MRPL28-208ENST00000469744 LARP1BQ659C4 914 aaKnown RBP20.13■□□□□ 0.81
MRPL28-208ENST00000469744 GPKOWQ92917 476 aaPredicted RBP eCLIP20.13■□□□□ 0.81
MRPL28-208ENST00000469744 ZNF274Q96GC6 653 aaPredicted RBP20.13■□□□□ 0.81
MRPL28-208ENST00000469744 DOCK5Q9H7D0 1870 aa20.13■□□□□ 0.81
MRPL28-208ENST00000469744 ACRP10323 421 aa20.12■□□□□ 0.81
MRPL28-208ENST00000469744 CYP2C9P11712 490 aa20.12■□□□□ 0.81
MRPL28-208ENST00000469744 SYNE3Q6ZMZ3 975 aa20.12■□□□□ 0.81
MRPL28-208ENST00000469744 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.12■□□□□ 0.811e-8■■■■■ 29.6
MRPL28-208ENST00000469744 NOC4LQ9BVI4 516 aaKnown RBP20.12■□□□□ 0.81
MRPL28-208ENST00000469744 GRPEL1Q9HAV7 217 aa20.12■□□□□ 0.81
MRPL28-208ENST00000469744 KPNA6O60684 536 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 XRCC6P12956 609 aaKnown RBP eCLIP20.11■□□□□ 0.81
MRPL28-208ENST00000469744 CCL23P55773 120 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 FGD1P98174 961 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 GPR153Q6NV75 609 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 C16orf59Q7L2K0 433 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 TMEM199Q8N511 208 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 SMARCC2Q8TAQ2 1214 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 NAP1L2Q9ULW6 460 aaPredicted RBP20.11■□□□□ 0.81
MRPL28-208ENST00000469744 KLF18A0A0U1RQI7 1052 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 MEIS2O14770 477 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 ZBTB43O43298 467 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
MRPL28-208ENST00000469744 SP2Q02086 613 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 PPIGQ13427 754 aaKnown RBP eCLIP20.11■□□□□ 0.812e-6■■■□□ 15.7
MRPL28-208ENST00000469744 HEATR3Q7Z4Q2 680 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 DHX37Q8IY37 1157 aaKnown RBP20.11■□□□□ 0.81
MRPL28-208ENST00000469744 BRF1Q92994 677 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 SYAP1Q96A49 352 aaPredicted RBP20.11■□□□□ 0.81
MRPL28-208ENST00000469744 SEZ6LQ9BYH1 1024 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 WNT8AQ9H1J5 351 aa20.11■□□□□ 0.81
MRPL28-208ENST00000469744 FRMPD4Q14CM0 1322 aa20.1■□□□□ 0.81
MRPL28-208ENST00000469744 CNTNAP5Q8WYK1 1306 aa20.1■□□□□ 0.81
MRPL28-208ENST00000469744 ZNF286BP0CG31 522 aa20.1■□□□□ 0.81
MRPL28-208ENST00000469744 UBA1P22314 1058 aaKnown RBP20.1■□□□□ 0.81
MRPL28-208ENST00000469744 HMGN5P82970 282 aaKnown RBP20.1■□□□□ 0.81
MRPL28-208ENST00000469744 RTN1Q16799 776 aa20.1■□□□□ 0.81
MRPL28-208ENST00000469744 ZSCAN23Q3MJ62 389 aa20.1■□□□□ 0.81
MRPL28-208ENST00000469744 CAVIN1Q6NZI2 390 aaKnown RBP20.1■□□□□ 0.81
MRPL28-208ENST00000469744 CUL5Q93034 780 aa20.1■□□□□ 0.81
MRPL28-208ENST00000469744 FAM161BQ96MY7 647 aa20.1■□□□□ 0.81
MRPL28-208ENST00000469744 BCAS3Q9H6U6 928 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms