RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 ARHGEF16Q5VV41 709 aa21.35■■□□□ 1.01
TTC28-205ENST00000469670 EP400NLQ6ZTU2 488 aa21.35■■□□□ 1.01
TTC28-205ENST00000469670 MCF2L2Q86YR7 1114 aa21.35■■□□□ 1.01
TTC28-205ENST00000469670 PRKAG3Q9UGI9 489 aa21.35■■□□□ 1.01
TTC28-205ENST00000469670 FAM50BQ9Y247 325 aa21.35■■□□□ 1.01
TTC28-205ENST00000469670 RSPH10B2B2RC85 870 aa21.34■■□□□ 1.01
TTC28-205ENST00000469670 H3BNC9 293 aa21.34■■□□□ 1.01
TTC28-205ENST00000469670 RSPH10BP0C881 870 aa21.34■■□□□ 1.01
TTC28-205ENST00000469670 THPOP40225 353 aa21.34■■□□□ 1.01
TTC28-205ENST00000469670 HAND2P61296 217 aa21.34■■□□□ 1.01
TTC28-205ENST00000469670 ZP2Q05996 745 aa21.34■■□□□ 1.01
TTC28-205ENST00000469670 NR3C2P08235 984 aa21.33■■□□□ 1.01
TTC28-205ENST00000469670 HOXD8P13378 290 aaPredicted RBP21.33■■□□□ 1.01
TTC28-205ENST00000469670 PLEKHG4Q58EX7 1191 aa21.33■■□□□ 1.01
TTC28-205ENST00000469670 MFSD6Q6ZSS7 791 aa21.33■■□□□ 1.01
TTC28-205ENST00000469670 SERINC5Q86VE9 423 aa21.33■■□□□ 1.01
TTC28-205ENST00000469670 EVI5LQ96CN4 794 aa21.33■■□□□ 1.01
TTC28-205ENST00000469670 YME1L1Q96TA2 773 aa21.33■■□□□ 1.01
TTC28-205ENST00000469670 C19orf67A6NJJ6 358 aa21.32■■□□□ 1
TTC28-205ENST00000469670 PPFIA4O75335 1185 aa21.32■■□□□ 1
TTC28-205ENST00000469670 HSPD1P10809 573 aaKnown RBP21.32■■□□□ 1
TTC28-205ENST00000469670 PCP11498 1178 aaKnown RBP21.32■■□□□ 1
TTC28-205ENST00000469670 COL19A1Q14993 1142 aa21.32■■□□□ 1
TTC28-205ENST00000469670 MCMDC2Q4G0Z9 681 aa21.32■■□□□ 1
TTC28-205ENST00000469670 TMEM192Q8IY95 271 aa21.32■■□□□ 1
TTC28-205ENST00000469670 ADGRF4Q8IZF3 695 aa21.32■■□□□ 1
TTC28-205ENST00000469670 FAM227BQ96M60 508 aa21.32■■□□□ 1
TTC28-205ENST00000469670 ZKSCAN3Q9BRR0 538 aa21.32■■□□□ 1
TTC28-205ENST00000469670 NSUN3Q9H649 340 aaKnown RBP21.32■■□□□ 1
TTC28-205ENST00000469670 PXMP2Q9NR77 195 aa21.32■■□□□ 1
TTC28-205ENST00000469670 MRPL11Q9Y3B7 192 aaKnown RBP21.32■■□□□ 1
TTC28-205ENST00000469670 ZMYM6O95789 1325 aa21.31■■□□□ 1
TTC28-205ENST00000469670 SALL3Q9BXA9 1300 aa21.31■■□□□ 1
TTC28-205ENST00000469670 A0A0D9SFI3 127 aa21.31■■□□□ 1
TTC28-205ENST00000469670 FBXO11Q86XK2 927 aa21.31■■□□□ 1
TTC28-205ENST00000469670 DGKHQ86XP1 1220 aa21.31■■□□□ 1
TTC28-205ENST00000469670 ADHFE1Q8IWW8 467 aa21.31■■□□□ 1
TTC28-205ENST00000469670 SEPT8Q92599 483 aa21.31■■□□□ 1
TTC28-205ENST00000469670 TOP1MTQ969P6 601 aa21.31■■□□□ 1
TTC28-205ENST00000469670 CLDND1Q9NY35 253 aa21.31■■□□□ 1
TTC28-205ENST00000469670 SORBS3O60504 671 aa21.3■■□□□ 1
TTC28-205ENST00000469670 UPP2O95045 317 aa21.3■■□□□ 1
TTC28-205ENST00000469670 QRICH1Q2TAL8 776 aa21.3■■□□□ 1
TTC28-205ENST00000469670 HSDL1Q3SXM5 330 aa21.3■■□□□ 1
TTC28-205ENST00000469670 MYSM1Q5VVJ2 828 aa21.3■■□□□ 1
TTC28-205ENST00000469670 HFE2Q6ZVN8 426 aa21.3■■□□□ 1
TTC28-205ENST00000469670 TBC1D10CQ8IV04 446 aa21.3■■□□□ 1
TTC28-205ENST00000469670 PNMA1Q8ND90 353 aa21.3■■□□□ 1
TTC28-205ENST00000469670 SPATA33Q96N06 139 aa21.3■■□□□ 1
TTC28-205ENST00000469670 UPF3BQ9BZI7 483 aaKnown RBP21.3■■□□□ 1
TTC28-205ENST00000469670 C17orf102A2RUQ5 167 aa21.29■■□□□ 1
TTC28-205ENST00000469670 CFBP00751 764 aa21.29■■□□□ 1
TTC28-205ENST00000469670 CELF3Q5SZQ8 465 aaKnown RBP21.29■■□□□ 1
TTC28-205ENST00000469670 ESR2Q92731 530 aa21.29■■□□□ 1
TTC28-205ENST00000469670 ATP6V0A1Q93050 837 aa21.29■■□□□ 1
TTC28-205ENST00000469670 C16orf70Q9BSU1 422 aa21.29■■□□□ 1
TTC28-205ENST00000469670 RNF41Q9H4P4 317 aaPredicted RBP21.29■■□□□ 1
TTC28-205ENST00000469670 DHX16O60231 1041 aaKnown RBP21.28■■□□□ 1
TTC28-205ENST00000469670 RGS20O76081 388 aa21.28■■□□□ 1
TTC28-205ENST00000469670 GGPS1O95749 300 aa21.28■■□□□ 1
TTC28-205ENST00000469670 IRS1P35568 1242 aa21.28■■□□□ 1
TTC28-205ENST00000469670 KCNV1Q6PIU1 500 aa21.28■■□□□ 1
TTC28-205ENST00000469670 RPAINQ86UA6 219 aa21.28■■□□□ 1
TTC28-205ENST00000469670 ZNF589Q86UQ0 364 aaPredicted RBP21.28■■□□□ 1
TTC28-205ENST00000469670 PCDHB15Q9Y5E8 787 aa21.28■■□□□ 1
TTC28-205ENST00000469670 NEDD4P46934 1319 aa21.28■■□□□ 1
TTC28-205ENST00000469670 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.27■■□□□ 1
TTC28-205ENST00000469670 NCK2O43639 380 aa21.27■■□□□ 1
TTC28-205ENST00000469670 MYCLP12524 364 aaPredicted RBP21.27■■□□□ 1
TTC28-205ENST00000469670 LTBRP36941 435 aa21.27■■□□□ 1
TTC28-205ENST00000469670 ASPRV1Q53RT3 343 aa21.27■■□□□ 1
TTC28-205ENST00000469670 ANKS1AQ92625 1134 aa21.27■■□□□ 1
TTC28-205ENST00000469670 MFSD14AQ96MC6 490 aa21.27■■□□□ 1
TTC28-205ENST00000469670 PDCD2LQ9BRP1 358 aa21.27■■□□□ 1
TTC28-205ENST00000469670 IFIH1Q9BYX4 1025 aaKnown RBP21.27■■□□□ 1
TTC28-205ENST00000469670 OSBPL7Q9BZF2 842 aa21.27■■□□□ 1
TTC28-205ENST00000469670 KAT14Q9H8E8 782 aa21.27■■□□□ 1
TTC28-205ENST00000469670 JMJD4Q9H9V9 463 aa21.27■■□□□ 1
TTC28-205ENST00000469670 VAT1LQ9HCJ6 419 aa21.27■■□□□ 1
TTC28-205ENST00000469670 COL4A6Q14031 1691 aa21.27■■□□□ 1
TTC28-205ENST00000469670 KIAA1217Q5T5P2 1943 aa21.27■■□□□ 1
TTC28-205ENST00000469670 TREHO43280 583 aa21.26■□□□□ 0.99
TTC28-205ENST00000469670 CTSHP09668 335 aa21.26■□□□□ 0.99
TTC28-205ENST00000469670 HOXC8P31273 242 aa21.26■□□□□ 0.99
TTC28-205ENST00000469670 HSD17B4P51659 736 aa21.26■□□□□ 0.99
TTC28-205ENST00000469670 MICAL3Q7RTP6 2002 aa21.26■□□□□ 0.99
TTC28-205ENST00000469670 H3BRB1 525 aa21.25■□□□□ 0.99
TTC28-205ENST00000469670 OPLAHO14841 1288 aa21.25■□□□□ 0.99
TTC28-205ENST00000469670 CAND2O75155 1236 aa21.25■□□□□ 0.99
TTC28-205ENST00000469670 SMIM10L2AP0DMW4 78 aa21.25■□□□□ 0.99
TTC28-205ENST00000469670 SMIM10L2BP0DMW5 78 aa21.25■□□□□ 0.99
TTC28-205ENST00000469670 UBA1P22314 1058 aaKnown RBP21.25■□□□□ 0.99
TTC28-205ENST00000469670 CTNNB1P35222 781 aa21.25■□□□□ 0.99
TTC28-205ENST00000469670 SP2Q02086 613 aa21.25■□□□□ 0.99
TTC28-205ENST00000469670 NMIQ13287 307 aaPredicted RBP21.25■□□□□ 0.99
TTC28-205ENST00000469670 SMAD2Q15796 467 aaKnown RBP21.25■□□□□ 0.99
TTC28-205ENST00000469670 CLUL1Q15846 466 aa21.25■□□□□ 0.99
TTC28-205ENST00000469670 CTC1Q2NKJ3 1217 aa21.25■□□□□ 0.99
TTC28-205ENST00000469670 CCDC178Q5BJE1 867 aa21.25■□□□□ 0.99
TTC28-205ENST00000469670 IQCA1Q86XH1 822 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms