RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 PDGFCQ9NRA1 345 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 DDX41Q9UJV9 622 aaKnown RBP9.76□□□□□ -0.85
SSBP1-208ENST00000469123 UBIAD1Q9Y5Z9 338 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 BRCA2P51587 3418 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 CEP290O15078 2479 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 SCN10AQ9Y5Y9 1956 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 A0A0U1RQG5 324 aaPredicted RBP9.75□□□□□ -0.85
SSBP1-208ENST00000469123 CCDC194A0A1B0GVG4 234 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 A6NJR5 290 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 SPATA31C2B4DYI2 1134 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 RGS20O76081 388 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 ZNF76P36508 570 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 ACLYP53396 1101 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 SNX17Q15036 470 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 NONOQ15233 471 aaKnown RBP eCLIP9.75□□□□□ -0.85
SSBP1-208ENST00000469123 KCNA10Q16322 511 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 DGKDQ16760 1214 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 CELF3Q5SZQ8 465 aaKnown RBP9.75□□□□□ -0.85
SSBP1-208ENST00000469123 GJC2Q5T442 439 aaPredicted RBP9.75□□□□□ -0.85
SSBP1-208ENST00000469123 JAKMIP3Q5VZ66 844 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 ANO1Q5XXA6 986 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 DHX37Q8IY37 1157 aaKnown RBP9.75□□□□□ -0.85
SSBP1-208ENST00000469123 IL31RAQ8NI17 732 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 TMX3Q96JJ7 454 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 C8orf76Q96K31 380 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 MXRA8Q9BRK3 442 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 KATNAL1Q9BW62 490 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 SENP6Q9GZR1 1112 aaPredicted RBP9.75□□□□□ -0.85
SSBP1-208ENST00000469123 STARD7Q9NQZ5 370 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 NR2E3Q9Y5X4 410 aa9.75□□□□□ -0.85
SSBP1-208ENST00000469123 A0A1W2PQ45 241 aaPredicted RBP9.74□□□□□ -0.85
SSBP1-208ENST00000469123 A0A1W2PQY0 241 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 M0R2N6 131 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 MEIS1O00470 390 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 NOP56O00567 594 aaKnown RBP9.74□□□□□ -0.85
SSBP1-208ENST00000469123 ADCY6O43306 1168 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 PPFIA4O75335 1185 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 ARIH2O95376 493 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 MYCNP04198 464 aaPredicted RBP9.74□□□□□ -0.85
SSBP1-208ENST00000469123 ASGR1P07306 291 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 HOXD8P13378 290 aaPredicted RBP9.74□□□□□ -0.85
SSBP1-208ENST00000469123 FDPSP14324 419 aaKnown RBP9.74□□□□□ -0.85
SSBP1-208ENST00000469123 GCFC2P16383 781 aaKnown RBP9.74□□□□□ -0.85
SSBP1-208ENST00000469123 UBA1P22314 1058 aaKnown RBP9.74□□□□□ -0.85
SSBP1-208ENST00000469123 KRT2P35908 639 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 ARHGAP1Q07960 439 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 LY6KQ17RY6 165 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 DIS3LQ8TF46 1054 aaKnown RBP9.74□□□□□ -0.85
SSBP1-208ENST00000469123 CRYGNQ8WXF5 182 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 SNX21Q969T3 373 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
SSBP1-208ENST00000469123 TOX2Q96NM4 488 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 SDF4Q9BRK5 362 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 MLXIPQ9HAP2 919 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 TCEAL9Q9UHQ7 104 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 NFASCO94856 1347 aa9.74□□□□□ -0.85
SSBP1-208ENST00000469123 KAT6AQ92794 2004 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 CTAGE5O15320 804 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 EVI5O60447 810 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 JAK2O60674 1132 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 PPFIA3O75145 1194 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 GGPS1O95749 300 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 MMP1P03956 469 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 MMP3P08254 477 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 PDIA4P13667 645 aaKnown RBP9.73□□□□□ -0.85
SSBP1-208ENST00000469123 ITGB5P18084 799 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 PURAQ00577 322 aaKnown RBP9.73□□□□□ -0.85
SSBP1-208ENST00000469123 PTPN11Q06124 597 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-208ENST00000469123 ST3GAL1Q11201 340 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 NPY5RQ15761 445 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 MYSM1Q5VVJ2 828 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 SLC39A5Q6ZMH5 540 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 TNPO1Q92973 898 aaKnown RBP9.73□□□□□ -0.85
SSBP1-208ENST00000469123 INTS4Q96HW7 963 aaKnown RBP9.73□□□□□ -0.85
SSBP1-208ENST00000469123 SPATA33Q96N06 139 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 AIFM3Q96NN9 605 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 MTG1Q9BT17 334 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-208ENST00000469123 ANP32EQ9BTT0 268 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 FOXP1Q9H334 677 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-208ENST00000469123 TBC1D22BQ9NU19 505 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 TMEM260Q9NX78 707 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 RTEL1Q9NZ71 1219 aa9.73□□□□□ -0.85
SSBP1-208ENST00000469123 DDX49Q9Y6V7 483 aaKnown RBP9.73□□□□□ -0.85
SSBP1-208ENST00000469123 ALPK3Q96L96 1907 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 CYP3A7-CYP3A51PA0A087WV96 503 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 MYADML2A6NDP7 307 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 TLR3O15455 904 aaKnown RBP9.72□□□□□ -0.85
SSBP1-208ENST00000469123 KCNA2P16389 499 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 PDCP20941 246 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 CYP3A7P24462 503 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 SEMA3FQ13275 785 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 ORC2Q13416 577 aaPredicted RBP9.72□□□□□ -0.85
SSBP1-208ENST00000469123 CUL4AQ13619 759 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 Q4G0T1 1027 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 KRT40Q6A162 431 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 PPP4R3AQ6IN85 833 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 NFRKBQ6P4R8 1299 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 ANKRD33Q7Z3H0 272 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 NEK8Q86SG6 692 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 PLA2G4DQ86XP0 818 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms