RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 LGR5O75473 907 aa16.93■□□□□ 0.3
SNED1-209ENST00000469006 CFBP00751 764 aa16.93■□□□□ 0.3
SNED1-209ENST00000469006 NR3C2P08235 984 aa16.93■□□□□ 0.3
SNED1-209ENST00000469006 PARP1P09874 1014 aaKnown RBP16.93■□□□□ 0.3
SNED1-209ENST00000469006 NT5C2P49902 561 aa16.93■□□□□ 0.3
SNED1-209ENST00000469006 ZNF200P98182 395 aaPredicted RBP16.93■□□□□ 0.3
SNED1-209ENST00000469006 DHX37Q8IY37 1157 aaKnown RBP16.93■□□□□ 0.3
SNED1-209ENST00000469006 ENAHQ8N8S7 591 aaPredicted RBP16.93■□□□□ 0.3
SNED1-209ENST00000469006 ANKS1AQ92625 1134 aa16.93■□□□□ 0.3
SNED1-209ENST00000469006 ZSCAN10Q96SZ4 725 aaPredicted RBP16.93■□□□□ 0.3
SNED1-209ENST00000469006 VAT1LQ9HCJ6 419 aa16.93■□□□□ 0.3
SNED1-209ENST00000469006 CD320Q9NPF0 282 aa16.93■□□□□ 0.3
SNED1-209ENST00000469006 ARIH1Q9Y4X5 557 aaPredicted RBP16.93■□□□□ 0.3
SNED1-209ENST00000469006 OPLAHO14841 1288 aa16.92■□□□□ 0.3
SNED1-209ENST00000469006 SORBS3O60504 671 aa16.92■□□□□ 0.3
SNED1-209ENST00000469006 IGHDP01880 384 aa16.92■□□□□ 0.3
SNED1-209ENST00000469006 HOXD8P13378 290 aaPredicted RBP16.92■□□□□ 0.3
SNED1-209ENST00000469006 SDSP20132 328 aa16.92■□□□□ 0.3
SNED1-209ENST00000469006 HIC1Q14526 733 aa16.92■□□□□ 0.3
SNED1-209ENST00000469006 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNED1-209ENST00000469006 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
SNED1-209ENST00000469006 EMSYQ7Z589 1322 aa16.92■□□□□ 0.3
SNED1-209ENST00000469006 GPR37L1O60883 481 aa16.91■□□□□ 0.3
SNED1-209ENST00000469006 AMHP03971 560 aa16.91■□□□□ 0.3
SNED1-209ENST00000469006 MYCLP12524 364 aaPredicted RBP16.91■□□□□ 0.3
SNED1-209ENST00000469006 KCNA5P22460 613 aa16.91■□□□□ 0.3
SNED1-209ENST00000469006 HSD17B4P51659 736 aa16.91■□□□□ 0.3
SNED1-209ENST00000469006 IRX6P78412 446 aaPredicted RBP16.91■□□□□ 0.3
SNED1-209ENST00000469006 MYSM1Q5VVJ2 828 aa16.91■□□□□ 0.3
SNED1-209ENST00000469006 FBXO22Q8NEZ5 403 aa16.91■□□□□ 0.3
SNED1-209ENST00000469006 SPATA33Q96N06 139 aa16.91■□□□□ 0.3
SNED1-209ENST00000469006 PDCD2LQ9BRP1 358 aa16.91■□□□□ 0.3
SNED1-209ENST00000469006 C17orf80Q9BSJ5 609 aa16.91■□□□□ 0.3
SNED1-209ENST00000469006 AMNQ9BXJ7 453 aa16.91■□□□□ 0.3
SNED1-209ENST00000469006 MICAL3Q7RTP6 2002 aa16.91■□□□□ 0.3
SNED1-209ENST00000469006 MYH7BA7E2Y1 1941 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 PIEZO1Q92508 2521 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.9■□□□□ 0.3
SNED1-209ENST00000469006 PPFIA4O75335 1185 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 RGS20O76081 388 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 GGPS1O95749 300 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 THPOP40225 353 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 GHRHRQ02643 423 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 MKRN4PQ13434 485 aaPredicted RBP16.9■□□□□ 0.3
SNED1-209ENST00000469006 HSDL1Q3SXM5 330 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 LEXMQ3ZCV2 418 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 SERINC5Q86VE9 423 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 MYOCDQ8IZQ8 938 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 DBF4BQ8NFT6 615 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 INSL6Q9Y581 213 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 MUC6Q6W4X9 2439 aa16.9■□□□□ 0.3
SNED1-209ENST00000469006 RSPH10B2B2RC85 870 aa16.89■□□□□ 0.29
SNED1-209ENST00000469006 PI4K2BG5E9Z4 385 aa16.89■□□□□ 0.29
SNED1-209ENST00000469006 PPP1R11O60927 126 aaPredicted RBP16.89■□□□□ 0.29
SNED1-209ENST00000469006 RSPH10BP0C881 870 aa16.89■□□□□ 0.29
SNED1-209ENST00000469006 UBA1P22314 1058 aaKnown RBP16.89■□□□□ 0.29
SNED1-209ENST00000469006 HTRA4P83105 476 aaPredicted RBP16.89■□□□□ 0.29
SNED1-209ENST00000469006 NUCB1Q02818 461 aa16.89■□□□□ 0.29
SNED1-209ENST00000469006 CELF3Q5SZQ8 465 aaKnown RBP16.89■□□□□ 0.29
SNED1-209ENST00000469006 CWC27Q6UX04 472 aaKnown RBP16.89■□□□□ 0.29
SNED1-209ENST00000469006 STAG2Q8N3U4 1231 aa16.89■□□□□ 0.29
SNED1-209ENST00000469006 IL31RAQ8NI17 732 aa16.89■□□□□ 0.29
SNED1-209ENST00000469006 UBAC1Q9BSL1 405 aa16.89■□□□□ 0.29
SNED1-209ENST00000469006 ZSWIM5Q9P217 1185 aa16.89■□□□□ 0.29
SNED1-209ENST00000469006 IL9P15248 144 aa16.88■□□□□ 0.29
SNED1-209ENST00000469006 HOXA13P31271 388 aaPredicted RBP16.88■□□□□ 0.29
SNED1-209ENST00000469006 PGM5Q15124 567 aa16.88■□□□□ 0.29
SNED1-209ENST00000469006 KCNV1Q6PIU1 500 aa16.88■□□□□ 0.29
SNED1-209ENST00000469006 STOX1Q6ZVD7 989 aa16.88■□□□□ 0.29
SNED1-209ENST00000469006 FAM178BQ8IXR5 827 aa16.88■□□□□ 0.29
SNED1-209ENST00000469006 GJD3Q8N144 294 aa16.88■□□□□ 0.29
SNED1-209ENST00000469006 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.88■□□□□ 0.29
SNED1-209ENST00000469006 SP7Q8TDD2 431 aaPredicted RBP16.88■□□□□ 0.29
SNED1-209ENST00000469006 C16orf70Q9BSU1 422 aa16.88■□□□□ 0.29
SNED1-209ENST00000469006 DIAPH3Q9NSV4 1193 aa16.88■□□□□ 0.29
SNED1-209ENST00000469006 C17orf102A2RUQ5 167 aa16.87■□□□□ 0.29
SNED1-209ENST00000469006 KLRF2D3W0D1 207 aa16.87■□□□□ 0.29
SNED1-209ENST00000469006 SSTR3P32745 418 aaPredicted RBP16.87■□□□□ 0.29
SNED1-209ENST00000469006 SP2Q02086 613 aa16.87■□□□□ 0.29
SNED1-209ENST00000469006 IMMTQ16891 758 aaKnown RBP16.87■□□□□ 0.29
SNED1-209ENST00000469006 PLEKHG4Q58EX7 1191 aa16.87■□□□□ 0.29
SNED1-209ENST00000469006 IFIT1BQ5T764 474 aaKnown RBP16.87■□□□□ 0.29
SNED1-209ENST00000469006 PTCRAQ6ISU1 281 aaPredicted RBP16.87■□□□□ 0.29
SNED1-209ENST00000469006 VSIG10LQ86VR7 867 aa16.87■□□□□ 0.29
SNED1-209ENST00000469006 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
SNED1-209ENST00000469006 GPKOWQ92917 476 aaPredicted RBP eCLIP16.87■□□□□ 0.29
SNED1-209ENST00000469006 ATP6V0A1Q93050 837 aa16.87■□□□□ 0.29
SNED1-209ENST00000469006 MRPL38Q96DV4 380 aaKnown RBP16.87■□□□□ 0.29
SNED1-209ENST00000469006 MTMR8Q96EF0 704 aa16.87■□□□□ 0.29
SNED1-209ENST00000469006 ZFP91Q96JP5 570 aaPredicted RBP16.87■□□□□ 0.29
SNED1-209ENST00000469006 KRT23Q9C075 422 aa16.87■□□□□ 0.29
SNED1-209ENST00000469006 MAP3K20Q9NYL2 800 aaKnown RBP16.87■□□□□ 0.29
SNED1-209ENST00000469006 PCDHA1Q9Y5I3 950 aa16.87■□□□□ 0.29
SNED1-209ENST00000469006 COL4A6Q14031 1691 aa16.86■□□□□ 0.29
SNED1-209ENST00000469006 ZBTB5O15062 677 aa16.86■□□□□ 0.29
SNED1-209ENST00000469006 LGALS2P05162 132 aa16.86■□□□□ 0.29
SNED1-209ENST00000469006 CTSHP09668 335 aa16.86■□□□□ 0.29
SNED1-209ENST00000469006 SMIM10L2AP0DMW4 78 aa16.86■□□□□ 0.29
SNED1-209ENST00000469006 SMIM10L2BP0DMW5 78 aa16.86■□□□□ 0.29
SNED1-209ENST00000469006 CCND2P30279 289 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms