RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 BIN1O00499 593 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 PSMD10O75832 226 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 SLC25A27O95847 323 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 ZBTB48P10074 688 aaPredicted RBP16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 MRPS9P82933 396 aaKnown RBP16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 MORC3Q14149 939 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 IL31RAQ8NI17 732 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 LRRC15Q8TF66 581 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 GJA10Q969M2 543 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 NUDT12Q9BQG2 462 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 A1CFQ9NQ94 594 aaKnown RBP16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 JADE2Q9NQC1 790 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 BLOC1S4Q9NUP1 217 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 VAV3Q9UKW4 847 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 PNMA3Q9UL41 463 aa16.87■□□□□ 0.29
CRAMP1-206ENST00000468839 DOCK5Q9H7D0 1870 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 ARP10275 920 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 PPP2R5CQ13362 524 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 DPCR1Q3MIW9 517 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 CT47A1Q5JQC4 288 aaPredicted RBP16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 ARHGEF16Q5VV41 709 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 SPRYD7Q5W111 196 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 OTOP1Q7RTM1 612 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 ANKRD23Q86SG2 305 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 KCTD17Q8N5Z5 321 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 ERMNQ8TAM6 284 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 NSUN6Q8TEA1 469 aaKnown RBP16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 CDK5RAP3Q96JB5 506 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 RIT2Q99578 217 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 C7orf25Q9BPX7 421 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 NT5C3AQ9H0P0 336 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 RBPJLQ9UBG7 517 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 PFASO15067 1338 aa16.86■□□□□ 0.29
CRAMP1-206ENST00000468839 PLXNB2O15031 1838 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 A0A087WWV3 80 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 ITGB5P18084 799 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 EIF2AK2P19525 551 aaKnown RBP16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 RPA1P27694 616 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 CCND2P30279 289 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 CCT6AP40227 531 aaKnown RBP16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 AMPD3Q01432 767 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 CUL4BQ13620 913 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 B3GNT9Q6UX72 402 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 VSIG10LQ86VR7 867 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 MLKLQ8NB16 471 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 DNERQ8NFT8 737 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 ZNF526Q8TF50 670 aaPredicted RBP16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 STAMQ92783 540 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 PLIN2Q99541 437 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 POLR3CQ9BUI4 534 aaPredicted RBP16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 MOV10L1Q9BXT6 1211 aaKnown RBP16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 WDR11Q9BZH6 1224 aa16.85■□□□□ 0.29
CRAMP1-206ENST00000468839 MYH9P35579 1960 aaKnown RBP16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 MYH11P35749 1972 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 CCL15-CCL14A0A0B4J2E2 113 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 MAFGO15525 162 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 STAM2O75886 525 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 NR3C2P08235 984 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 BMP6P22004 513 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 MUTP22033 750 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 ECM1Q16610 540 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 CCL15Q16663 113 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 LRCH2Q5VUJ6 765 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 HAUS3Q68CZ6 603 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 ISM2Q6H9L7 571 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 CNNM4Q6P4Q7 775 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 SV2BQ7L1I2 683 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 SHCBP1Q8NEM2 672 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 BRI3BPQ8WY22 251 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 ANP32BQ92688 251 aaKnown RBP16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 RAD54LQ92698 747 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 IWS1Q96ST2 819 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 ZNF577Q9BSK1 485 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 PAGR1Q9BTK6 254 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 TEKT3Q9BXF9 490 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 LRRC27Q9C0I9 530 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 LRRC37A2A6NM11 1700 aa16.84■□□□□ 0.29
CRAMP1-206ENST00000468839 TESPA1A2RU30 521 aaPredicted RBP16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 SMTNL1A8MU46 457 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 BTBD19C9JJ37 291 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 IPO5O00410 1097 aaKnown RBP16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 MCM3APO60318 1980 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 RPN1P04843 607 aaKnown RBP16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 MYCLP12524 364 aaPredicted RBP16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 CASP1P29466 404 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 UTRNP46939 3433 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 KCNB1Q14721 858 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 Q3C1V9 767 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 NCAPH2Q6IBW4 605 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 LUZP1Q86V48 1076 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 DHX40Q8IX18 779 aaKnown RBP16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 ANKRD35Q8N283 1001 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 LARP4BQ92615 738 aaKnown RBP16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 GPRASP2Q96D09 838 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 PURBQ96QR8 312 aaKnown RBP16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 UIMC1Q96RL1 719 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 AGO4Q9HCK5 861 aaKnown RBP16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 TXNRD2Q9NNW7 524 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 KCNH7Q9NS40 1196 aa16.83■□□□□ 0.28
CRAMP1-206ENST00000468839 RMND1Q9NWS8 449 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms