RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 ANO3Q9BYT9 981 aa16.92■□□□□ 0.3
TMEM39A-205ENST00000468676 A0A0U1RQG5 324 aaPredicted RBP16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 MAFGO15525 162 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 ST18O60284 1047 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 SREBF1P36956 1147 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 NEDD9Q14511 834 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 CELF3Q5SZQ8 465 aaKnown RBP16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 C7orf61Q8IZ16 206 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 NECAB1Q8N987 351 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 GIMAP8Q8ND71 665 aaPredicted RBP16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 COPS5Q92905 334 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 SENP7Q9BQF6 1050 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 BACH2Q9BYV9 841 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 SH2B1Q9NRF2 756 aaPredicted RBP16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 RTEL1Q9NZ71 1219 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 VPS54Q9P1Q0 977 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 MROH7Q68CQ1 1323 aa16.91■□□□□ 0.3
TMEM39A-205ENST00000468676 PTGS1P23219 599 aa16.9■□□□□ 0.3
TMEM39A-205ENST00000468676 MYSM1Q5VVJ2 828 aa16.9■□□□□ 0.3
TMEM39A-205ENST00000468676 CXCL17Q6UXB2 119 aa16.9■□□□□ 0.3
TMEM39A-205ENST00000468676 PPTC7Q8NI37 304 aa16.9■□□□□ 0.3
TMEM39A-205ENST00000468676 TOX2Q96NM4 488 aa16.9■□□□□ 0.3
TMEM39A-205ENST00000468676 MTG1Q9BT17 334 aaPredicted RBP16.9■□□□□ 0.3
TMEM39A-205ENST00000468676 ORC3Q9UBD5 711 aaPredicted RBP16.9■□□□□ 0.3
TMEM39A-205ENST00000468676 ATP11BQ9Y2G3 1177 aa16.9■□□□□ 0.3
TMEM39A-205ENST00000468676 UBIAD1Q9Y5Z9 338 aa16.9■□□□□ 0.3
TMEM39A-205ENST00000468676 H0YGN5 161 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 ARVCFO00192 962 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 LARGE1O95461 756 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 CTDNEP1O95476 244 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 GGPS1O95749 300 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 MYL3P08590 195 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 UBA1P22314 1058 aaKnown RBP16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 PURAQ00577 322 aaKnown RBP16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 MTMR1Q13613 665 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 DGKDQ16760 1214 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 TRIM60Q495X7 471 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 JAKMIP3Q5VZ66 844 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 ANKRD33Q7Z3H0 272 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 AFG1LQ8WV93 481 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 ZFP91Q96JP5 570 aaPredicted RBP16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 MLXIPQ9HAP2 919 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 JADE2Q9NQC1 790 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 TMEM260Q9NX78 707 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 PCDHA4Q9UN74 947 aa16.89■□□□□ 0.29
TMEM39A-205ENST00000468676 DCDC2CA8MYV0 355 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 PPFIA4O75335 1185 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 MMP3P08254 477 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 CYP3A4P08684 503 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 ITGB5P18084 799 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 ZNF76P36508 570 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 MCM2P49736 904 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 CDK7P50613 346 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 ARHGAP4P98171 946 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 SP2Q02086 613 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 ITGA7Q13683 1181 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 CEP55Q53EZ4 464 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 METTL7BQ6UX53 244 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 NIPA1Q7RTP0 329 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 SLC43A3Q8NBI5 491 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 DAGLBQ8NCG7 672 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 NSUN7Q8NE18 718 aaKnown RBP16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 SPATA33Q96N06 139 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 MXRA8Q9BRK3 442 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 LLPHQ9BRT6 129 aaKnown RBP16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 PRKAG2Q9UGJ0 569 aa16.88■□□□□ 0.29
TMEM39A-205ENST00000468676 TLE2Q04725 743 aa16.87■□□□□ 0.29
TMEM39A-205ENST00000468676 SEMA3FQ13275 785 aa16.87■□□□□ 0.29
TMEM39A-205ENST00000468676 BLIDQ8IZY5 108 aa16.87■□□□□ 0.29
TMEM39A-205ENST00000468676 PGBD1Q96JS3 809 aa16.87■□□□□ 0.29
TMEM39A-205ENST00000468676 SCN10AQ9Y5Y9 1956 aa16.87■□□□□ 0.29
TMEM39A-205ENST00000468676 MEIS1O00470 390 aa16.86■□□□□ 0.29
TMEM39A-205ENST00000468676 NOP56O00567 594 aaKnown RBP16.86■□□□□ 0.29
TMEM39A-205ENST00000468676 TLR3O15455 904 aaKnown RBP16.86■□□□□ 0.29
TMEM39A-205ENST00000468676 PQBP1O60828 265 aaKnown RBP16.86■□□□□ 0.29
TMEM39A-205ENST00000468676 HOXD8P13378 290 aaPredicted RBP16.86■□□□□ 0.29
TMEM39A-205ENST00000468676 CRYGNQ8WXF5 182 aa16.86■□□□□ 0.29
TMEM39A-205ENST00000468676 AIFM3Q96NN9 605 aa16.86■□□□□ 0.29
TMEM39A-205ENST00000468676 ALG1Q9BT22 464 aa16.86■□□□□ 0.29
TMEM39A-205ENST00000468676 PHF20Q9BVI0 1012 aa16.86■□□□□ 0.29
TMEM39A-205ENST00000468676 KATNAL1Q9BW62 490 aa16.86■□□□□ 0.29
TMEM39A-205ENST00000468676 CLTBP09497 229 aa16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 FDPSP14324 419 aaKnown RBP16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 USP11P51784 963 aa16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 HMGN5P82970 282 aaKnown RBP16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 PTPN11Q06124 597 aaPredicted RBP16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 TRIM29Q14134 588 aa16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 HSDL1Q3SXM5 330 aa16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 NFRKBQ6P4R8 1299 aa16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 CYFIP1Q7L576 1253 aa16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 CCDC83Q8IWF9 413 aa16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 KCNH7Q9NS40 1196 aa16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 ZMYND8Q9ULU4 1186 aaPredicted RBP16.85■□□□□ 0.29
TMEM39A-205ENST00000468676 M0R2N6 131 aa16.84■□□□□ 0.29
TMEM39A-205ENST00000468676 KCNA2P16389 499 aa16.84■□□□□ 0.29
TMEM39A-205ENST00000468676 CIITAP33076 1130 aa16.84■□□□□ 0.29
TMEM39A-205ENST00000468676 SETQ01105 290 aaPredicted RBP16.84■□□□□ 0.29
TMEM39A-205ENST00000468676 KRT25Q7Z3Z0 450 aa16.84■□□□□ 0.29
TMEM39A-205ENST00000468676 RASGRP4Q8TDF6 673 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms