RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 FAM217BQ9NTX9 383 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-203ENST00000468565 CIZ1Q9ULV3 898 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-203ENST00000468565 SZT2Q5T011 3432 aa16.61■□□□□ 0.25
COL27A1-203ENST00000468565 CCDC196A0A1B0GTZ2 297 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 K7ELQ4 463 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-203ENST00000468565 CDC27P30260 824 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 METAP2P50579 478 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL27A1-203ENST00000468565 FPGSQ05932 587 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 APOBRQ0VD83 1088 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 GNPTABQ3T906 1256 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 MFSD5Q6N075 450 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 PPP1R18Q6NYC8 613 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 B4GALT4O60513 344 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 ICAM3P32942 547 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 MRPS9P82933 396 aaKnown RBP16.6■□□□□ 0.25
COL27A1-203ENST00000468565 PTPN11Q06124 597 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-203ENST00000468565 PCNX4Q63HM2 1172 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 GPR153Q6NV75 609 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 NFRKBQ6P4R8 1299 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 HEATR3Q7Z4Q2 680 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 DHX37Q8IY37 1157 aaKnown RBP16.6■□□□□ 0.25
COL27A1-203ENST00000468565 PPTC7Q8NI37 304 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 GPKOWQ92917 476 aaPredicted RBP eCLIP16.6■□□□□ 0.25
COL27A1-203ENST00000468565 INPP4AQ96PE3 977 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-203ENST00000468565 ALDH8A1Q9H2A2 487 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-203ENST00000468565 ZSWIM6Q9HCJ5 1215 aa16.6■□□□□ 0.25
COL27A1-203ENST00000468565 HSP90AA1P07900 732 aaKnown RBP16.59■□□□□ 0.25
COL27A1-203ENST00000468565 DGKDQ16760 1214 aa16.59■□□□□ 0.25
COL27A1-203ENST00000468565 CELF3Q5SZQ8 465 aaKnown RBP16.59■□□□□ 0.25
COL27A1-203ENST00000468565 WWC2Q6AWC2 1192 aa16.59■□□□□ 0.25
COL27A1-203ENST00000468565 RUFY3Q7L099 469 aa16.59■□□□□ 0.25
COL27A1-203ENST00000468565 UBE2Q2Q8WVN8 375 aa16.59■□□□□ 0.25
COL27A1-203ENST00000468565 TM6SF1Q9BZW5 370 aa16.59■□□□□ 0.25
COL27A1-203ENST00000468565 NAP1L2Q9ULW6 460 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-203ENST00000468565 TANC1Q9C0D5 1861 aa16.59■□□□□ 0.25
COL27A1-203ENST00000468565 TRIP12Q14669 1992 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-203ENST00000468565 SUPT20HL2P0C7V6 817 aa16.58■□□□□ 0.25
COL27A1-203ENST00000468565 HOXD8P13378 290 aaPredicted RBP16.58■□□□□ 0.25
COL27A1-203ENST00000468565 UBA1P22314 1058 aaKnown RBP16.58■□□□□ 0.25
COL27A1-203ENST00000468565 EVCP57679 992 aa16.58■□□□□ 0.25
COL27A1-203ENST00000468565 SHHQ15465 462 aa16.58■□□□□ 0.25
COL27A1-203ENST00000468565 NBPF20Q3BBV1 942 aa16.58■□□□□ 0.25
COL27A1-203ENST00000468565 MYSM1Q5VVJ2 828 aa16.58■□□□□ 0.25
COL27A1-203ENST00000468565 LRCH3Q96II8 777 aa16.58■□□□□ 0.25
COL27A1-203ENST00000468565 TRPV6Q9H1D0 765 aa16.58■□□□□ 0.25
COL27A1-203ENST00000468565 V9GY48 417 aaPredicted RBP16.58■□□□□ 0.25
COL27A1-203ENST00000468565 DDIT3P35638 169 aa16.58■□□□□ 0.24
COL27A1-203ENST00000468565 SP2Q02086 613 aa16.58■□□□□ 0.24
COL27A1-203ENST00000468565 PPIGQ13427 754 aaKnown RBP eCLIP16.58■□□□□ 0.243e-31■■■□□ 16.6
COL27A1-203ENST00000468565 C9orf50Q5SZB4 431 aa16.58■□□□□ 0.24
COL27A1-203ENST00000468565 TMEM199Q8N511 208 aa16.58■□□□□ 0.24
COL27A1-203ENST00000468565 PPP1R12CQ9BZL4 782 aa16.58■□□□□ 0.24
COL27A1-203ENST00000468565 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 FIBPO43427 364 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 GGPS1O95749 300 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 NAPAP54920 295 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 KAT2BQ92831 832 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 ZFP91Q96JP5 570 aaPredicted RBP16.57■□□□□ 0.24
COL27A1-203ENST00000468565 NOC4LQ9BVI4 516 aaKnown RBP16.57■□□□□ 0.24
COL27A1-203ENST00000468565 HIPK3Q9H422 1215 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 BARHL2Q9NY43 387 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 CYP46A1Q9Y6A2 500 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 SPATA31C2B4DYI2 1134 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 STXBP3O00186 592 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 MCM4P33991 863 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 ADD1P35611 737 aaKnown RBP16.57■□□□□ 0.24
COL27A1-203ENST00000468565 EPHB4P54760 987 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 UBE2SQ16763 222 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 FAM47CQ5HY64 1035 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 TYW1BQ6NUM6 668 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 SESTD1Q86VW0 696 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 SPATA33Q96N06 139 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 KATNAL1Q9BW62 490 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 GLT8D2Q9H1C3 349 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 RIC8AQ9NPQ8 531 aa16.57■□□□□ 0.24
COL27A1-203ENST00000468565 TRMT13Q9NUP7 481 aaKnown RBP16.57■□□□□ 0.24
COL27A1-203ENST00000468565 PPFIA4O75335 1185 aa16.56■□□□□ 0.24
COL27A1-203ENST00000468565 SEMA3FQ13275 785 aa16.56■□□□□ 0.24
COL27A1-203ENST00000468565 NEDD9Q14511 834 aa16.56■□□□□ 0.24
COL27A1-203ENST00000468565 PFKFB3Q16875 520 aaPredicted RBP16.56■□□□□ 0.24
COL27A1-203ENST00000468565 NLRX1Q86UT6 975 aa16.56■□□□□ 0.24
COL27A1-203ENST00000468565 EHMT1Q9H9B1 1298 aa16.56■□□□□ 0.24
COL27A1-203ENST00000468565 MLXIPQ9HAP2 919 aa16.56■□□□□ 0.24
COL27A1-203ENST00000468565 RTEL1Q9NZ71 1219 aa16.56■□□□□ 0.24
COL27A1-203ENST00000468565 PCDHA6Q9UN73 950 aa16.56■□□□□ 0.24
COL27A1-203ENST00000468565 PCDHA8Q9Y5H6 950 aa16.56■□□□□ 0.24
COL27A1-203ENST00000468565 SCN5AQ14524 2016 aa16.56■□□□□ 0.24
COL27A1-203ENST00000468565 KAT6AQ92794 2004 aa16.56■□□□□ 0.24
COL27A1-203ENST00000468565 F2P00734 622 aa16.55■□□□□ 0.24
COL27A1-203ENST00000468565 CYP2C18P33260 490 aa16.55■□□□□ 0.24
COL27A1-203ENST00000468565 ADCY7P51828 1080 aa16.55■□□□□ 0.24
COL27A1-203ENST00000468565 HSDL1Q3SXM5 330 aa16.55■□□□□ 0.24
COL27A1-203ENST00000468565 GPRASP2Q96D09 838 aa16.55■□□□□ 0.24
COL27A1-203ENST00000468565 SENP7Q9BQF6 1050 aa16.55■□□□□ 0.24
COL27A1-203ENST00000468565 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
COL27A1-203ENST00000468565 CSF2RAP15509 400 aa16.55■□□□□ 0.24
COL27A1-203ENST00000468565 PDIA3P30101 505 aaKnown RBP16.55■□□□□ 0.24
COL27A1-203ENST00000468565 TOB2Q14106 344 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-203ENST00000468565 METTL7BQ6UX53 244 aa16.55■□□□□ 0.24
COL27A1-203ENST00000468565 CDHR1Q96JP9 859 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms