RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TNNI3KQ59H18 835 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 NKAPLQ5M9Q1 402 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 PAOXQ6QHF9 649 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 CLEC10AQ8IUN9 316 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 SLITRK4Q8IW52 837 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 REXO1Q8N1G1 1221 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 GRAPLQ8TC17 118 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 ZNF507Q8TCN5 953 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 ISL2Q96A47 359 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 EAF2Q96CJ1 260 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 MASTLQ96GX5 879 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 FAM83CQ9BQN1 747 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 TINF2Q9BSI4 451 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 MTFR1LQ9H019 292 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 TMX4Q9H1E5 349 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 ADAM30Q9UKF2 790 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 POLR3KQ9Y2Y1 108 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 DAGLAQ9Y4D2 1042 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 RIPOR2Q9Y4F9 1068 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 FPGT-TNNI3KV9GXZ4 949 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 C4AP0C0L4 1744 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 ANKRD36CQ5JPF3 1778 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 BCORQ6W2J9 1755 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 TUBGCP6Q96RT7 1819 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 A0A1B0GUL7 405 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 WTIPA6NIX2 430 aaPredicted RBP4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 BBOX1O75936 387 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 CIAO1O76071 339 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 PGRP06401 933 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 NFICP08651 508 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 NPR1P16066 1061 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 DPEP1P16444 411 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 ADORA1P30542 326 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 ALDH1B1P30837 517 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 TNNI2P48788 182 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 ZNF165P49910 485 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 PDE1AP54750 535 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 CHRNDQ07001 517 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 ATP2B3Q16720 1220 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 TTC39AQ5SRH9 613 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 OLFM4Q6UX06 510 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 CDC37L1Q7L3B6 337 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 SLC51AQ86UW1 340 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 RILPL2Q969X0 211 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 GPR101Q96P66 508 aaPredicted RBP4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 DBNDD2Q9BQY9 259 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 BOLA2Q9H3K6 86 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 C7orf69Q9H7B7 122 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 CAPN10Q9HC96 672 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 SPON1Q9HCB6 807 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 BRMS1Q9HCU9 246 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 SSU72Q9NP77 194 aaKnown RBP4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 BSDC1Q9NW68 430 aaPredicted RBP4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 STOML1Q9UBI4 398 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 PCOLCE2Q9UKZ9 415 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 MINPP1Q9UNW1 487 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 RGPD3A6NKT7 1758 aaPredicted RBP4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 RGPD4Q7Z3J3 1758 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 SCN7AQ01118 1682 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 MROH5Q6ZUA9 1318 aa4.95□□□□□ -1.62
TMEM39A-204ENST00000468545 N4BP2Q86UW6 1770 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 HMX2A2RU54 273 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 GRIN3BO60391 1043 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 ATE1O95260 518 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 PDE8BO95263 885 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 HTR3BO95264 441 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 IFIT1P09914 478 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 SRGNP10124 158 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 SLC5A1P13866 664 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 PLCG1P19174 1290 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 MX1P20591 662 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 HOXA10P31260 410 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 CAP2P40123 477 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 SOX9P48436 509 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 GPSM2P81274 684 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 NFKBIBQ15653 356 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 CCDC158Q5M9N0 1113 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 TMEM201Q5SNT2 666 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 ZMYM1Q5SVZ6 1142 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 VPS37DQ86XT2 251 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 HID1Q8IV36 788 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 GPATCH3Q96I76 525 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 CRAMP1Q96RY5 1269 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 DNAJC2Q99543 621 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 ANKRD2Q9GZV1 360 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 EHMT1Q9H9B1 1298 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 FBRSQ9HAH7 460 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 ECHDC1Q9NTX5 307 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 PCDHB14Q9Y5E9 798 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 CORINQ9Y5Q5 1042 aa4.94□□□□□ -1.62
TMEM39A-204ENST00000468545 RTL9Q8NET4 1388 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 KLRG2A4D1S0 409 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 ERC2O15083 957 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 GSC2O15499 205 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 DYNC1LI2O43237 492 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 DYRK3O43781 588 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 FRAT2O75474 233 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 UFL1O94874 794 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 TAF1P21675 1872 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms