RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 LRRC53A6NM62 1247 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 PICALMQ13492 652 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 AFAP1L1Q8TED9 768 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 CDK5RAP2Q96SN8 1893 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 CRACR2AQ9BSW2 395 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 COA1Q9GZY4 146 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 DDX60LQ5H9U9 1706 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 LOC102724159A0A0B4J2E5 919 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 RPS6KA5O75582 802 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 PRPF6O94906 941 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 PLCG2P16885 1265 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 NOP2P46087 812 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 ADCY7P51828 1080 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 PWP2Q15269 919 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 DPP8Q6V1X1 898 aaPredicted RBP17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 SNX29Q8TEQ0 813 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 RIN2Q8WYP3 895 aaPredicted RBP17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 RAD54LQ92698 747 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 NUDT12Q9BQG2 462 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 ZC3H4Q9UPT8 1303 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 ATP2B2Q01814 1243 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 LRRC63Q05C16 580 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 LRRC41Q15345 812 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 SLF2Q8IX21 1173 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 MMGT1Q8N4V1 131 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 RAB34Q9BZG1 259 aa17.49■□□□□ 0.39
TSPAN4-211ENST00000468468 LCA5LO95447 670 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 PDHBP11177 359 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 GGCXP38435 758 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 KRT79Q5XKE5 535 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 DDX12PQ92771 950 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 RASSF4Q9H2L5 321 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 ABCB11O95342 1321 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 hCG_1984214I3L0E3 225 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 EDIL3O43854 480 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 MAGEA1P43355 309 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 PDIA5Q14554 519 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 ZNF772Q68DY9 489 aaPredicted RBP17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 FOXR1Q6PIV2 292 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 KCNK18Q7Z418 384 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 ZNF713Q8N859 430 aaPredicted RBP17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 GLIS3Q8NEA6 775 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 ZNF622Q969S3 477 aaKnown RBP eCLIP17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 ALS2CR12Q96Q35 445 aa17.48■□□□□ 0.39
TSPAN4-211ENST00000468468 PRLRP16471 622 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 SCNN1DP51172 638 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 EZH2Q15910 746 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 LRRC31Q6UY01 552 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 LRRC55Q6ZSA7 311 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 CACNA2D4Q7Z3S7 1137 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 BAP1Q92560 729 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 OSBPL9Q96SU4 736 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 PSMB7Q99436 277 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 TSG101Q99816 390 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 LRRC1Q9BTT6 524 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 TANGO6Q9C0B7 1094 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 MYO1CO00159 1063 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 PDE6BP35913 854 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 MATR3P43243 847 aaKnown RBP eCLIP17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 NOVP48745 357 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 NFRKBQ6P4R8 1299 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 SRLQ86TD4 932 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 SPATA4Q8NEY3 305 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
TSPAN4-211ENST00000468468 ALDH1B1P30837 517 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 CXCR5P32302 372 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 TNNI2P48788 182 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 PSMD2Q13200 908 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 LRRC47Q8N1G4 583 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 CCDC155Q8N6L0 562 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 ANKRD13CQ8N6S4 541 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 HDAC7Q8WUI4 952 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 LRRC27Q9C0I9 530 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 GPCPD1Q9NPB8 672 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 FAM184BQ9ULE4 1060 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 RRP15Q9Y3B9 282 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 HYOU1Q9Y4L1 999 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 TCP1P17987 556 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 PDXDC1Q6P996 788 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 ZNF572Q7Z3I7 529 aaPredicted RBP17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 AENQ8WTP8 325 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 MASTLQ96GX5 879 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 RIC8AQ9NPQ8 531 aa17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 DDX4Q9NQI0 724 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 DMGDHQ9UI17 866 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-211ENST00000468468 COL11A2P13942 1736 aaPredicted RBP17.46■□□□□ 0.38
TSPAN4-211ENST00000468468 NRXN2Q9P2S2 1712 aa17.46■□□□□ 0.38
TSPAN4-211ENST00000468468 AGPSO00116 658 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 EIF6P56537 245 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 ITIH3Q06033 890 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 GFPT1Q06210 699 aaPredicted RBP17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 TMEM119Q4V9L6 283 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 CCDC181Q5TID7 509 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 KCNQ5Q9NR82 932 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 MTMR4Q9NYA4 1195 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 SALL4Q9UJQ4 1053 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 NCK2O43639 380 aa17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 MRPS25P82663 173 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-211ENST00000468468 RASSF7Q02833 373 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms