RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 ERICH2A1L162 156 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 EPOPA6NHQ4 379 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 SORBS3O60504 671 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 RGS20O76081 388 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 ARHGEF15O94989 841 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 PARNO95453 639 aaKnown RBP20.03■□□□□ 0.8
TRIM56-203ENST00000467847 WDR5P61964 334 aaKnown RBP20.03■□□□□ 0.8
TRIM56-203ENST00000467847 TRAF1Q13077 416 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 GRM4Q14833 912 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 GPNMBQ14956 572 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 PGM5Q15124 567 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 VSIG10LQ86VR7 867 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 SAMD3Q8N6K7 520 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 RUFY2Q8WXA3 655 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 SPATA33Q96N06 139 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 MTCH2Q9Y6C9 303 aa20.03■□□□□ 0.8
TRIM56-203ENST00000467847 TCF20Q9UGU0 1960 aaKnown RBP20.03■□□□□ 0.8
TRIM56-203ENST00000467847 GCOM1H8Y6P7 765 aaPredicted RBP20.02■□□□□ 0.8
TRIM56-203ENST00000467847 HAS3O00219 553 aa20.02■□□□□ 0.8
TRIM56-203ENST00000467847 IFIT3O14879 490 aaKnown RBP20.02■□□□□ 0.8
TRIM56-203ENST00000467847 CYP21A2P08686 494 aa20.02■□□□□ 0.8
TRIM56-203ENST00000467847 POLR2MP0CAP2 368 aa20.02■□□□□ 0.8
TRIM56-203ENST00000467847 POU3F3P20264 500 aaPredicted RBP20.02■□□□□ 0.8
TRIM56-203ENST00000467847 PTK7Q13308 1070 aa20.02■□□□□ 0.8
TRIM56-203ENST00000467847 CELF3Q5SZQ8 465 aaKnown RBP20.02■□□□□ 0.8
TRIM56-203ENST00000467847 MYSM1Q5VVJ2 828 aa20.02■□□□□ 0.8
TRIM56-203ENST00000467847 CNKSR3Q6P9H4 555 aa20.02■□□□□ 0.8
TRIM56-203ENST00000467847 IL31RAQ8NI17 732 aa20.02■□□□□ 0.8
TRIM56-203ENST00000467847 PIGSQ96S52 555 aa20.02■□□□□ 0.8
TRIM56-203ENST00000467847 COL4A4P53420 1690 aaPredicted RBP20.01■□□□□ 0.79
TRIM56-203ENST00000467847 NBNO60934 754 aa20.01■□□□□ 0.79
TRIM56-203ENST00000467847 PPFIA4O75335 1185 aa20.01■□□□□ 0.79
TRIM56-203ENST00000467847 GGPS1O95749 300 aa20.01■□□□□ 0.79
TRIM56-203ENST00000467847 CXCL10P02778 98 aa20.01■□□□□ 0.79
TRIM56-203ENST00000467847 HOXD8P13378 290 aaPredicted RBP20.01■□□□□ 0.79
TRIM56-203ENST00000467847 CCND2P30279 289 aa20.01■□□□□ 0.79
TRIM56-203ENST00000467847 PTH1RQ03431 593 aa20.01■□□□□ 0.79
TRIM56-203ENST00000467847 SLC35G1Q2M3R5 365 aa20.01■□□□□ 0.79
TRIM56-203ENST00000467847 HSDL1Q3SXM5 330 aa20.01■□□□□ 0.79
TRIM56-203ENST00000467847 TMCO2Q7Z6W1 182 aaPredicted RBP20.01■□□□□ 0.79
TRIM56-203ENST00000467847 RALYLQ86SE5 291 aaKnown RBP20.01■□□□□ 0.79
TRIM56-203ENST00000467847 FCHSD1Q86WN1 690 aa20.01■□□□□ 0.79
TRIM56-203ENST00000467847 ZBED2Q9BTP6 218 aa20.01■□□□□ 0.79
TRIM56-203ENST00000467847 RIOX1Q9H6W3 641 aa20.01■□□□□ 0.79
TRIM56-203ENST00000467847 TGFB3P10600 412 aa20■□□□□ 0.79
TRIM56-203ENST00000467847 BMP1P13497 986 aa20■□□□□ 0.79
TRIM56-203ENST00000467847 UBA1P22314 1058 aaKnown RBP20■□□□□ 0.79
TRIM56-203ENST00000467847 CHMLP26374 656 aa20■□□□□ 0.79
TRIM56-203ENST00000467847 DEFB103AP81534 67 aa20■□□□□ 0.79
TRIM56-203ENST00000467847 ZNF200P98182 395 aaPredicted RBP20■□□□□ 0.79
TRIM56-203ENST00000467847 SP2Q02086 613 aa20■□□□□ 0.79
TRIM56-203ENST00000467847 TFF2Q03403 129 aa20■□□□□ 0.79
TRIM56-203ENST00000467847 WTAPQ15007 396 aa20■□□□□ 0.79
TRIM56-203ENST00000467847 SART3Q15020 963 aaKnown RBP20■□□□□ 0.79
TRIM56-203ENST00000467847 KRT40Q6A162 431 aa20■□□□□ 0.79
TRIM56-203ENST00000467847 ZFP91Q96JP5 570 aaPredicted RBP20■□□□□ 0.79
TRIM56-203ENST00000467847 SENP2Q9HC62 589 aa20■□□□□ 0.79
TRIM56-203ENST00000467847 PNMA6FA0A0J9YX94 578 aa19.99■□□□□ 0.79
TRIM56-203ENST00000467847 ABHD14A-ACY1A0A1B0GW23 586 aa19.99■□□□□ 0.79
TRIM56-203ENST00000467847 LCHNA4D1U4 455 aa19.99■□□□□ 0.79
TRIM56-203ENST00000467847 TRIM71Q2Q1W2 868 aaKnown RBP19.99■□□□□ 0.79
TRIM56-203ENST00000467847 ZNF618Q5T7W0 954 aa19.99■□□□□ 0.79
TRIM56-203ENST00000467847 NCOA7Q8NI08 942 aa19.99■□□□□ 0.79
TRIM56-203ENST00000467847 WNT8BQ93098 351 aa19.99■□□□□ 0.79
TRIM56-203ENST00000467847 MLXIPQ9HAP2 919 aa19.99■□□□□ 0.79
TRIM56-203ENST00000467847 E7EWF7 191 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 CYTH3O43739 400 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 EFCAB14O75071 495 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 TROAPQ12815 778 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 GRB10Q13322 594 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 IKBKEQ14164 716 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 TCTN1Q2MV58 587 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 TRAF7Q6Q0C0 670 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 SPRED2Q7Z698 418 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 CATIPQ7Z7H3 387 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 GPKOWQ92917 476 aaPredicted RBP eCLIP19.98■□□□□ 0.79
TRIM56-203ENST00000467847 C16orf70Q9BSU1 422 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 TAF6LQ9Y6J9 622 aa19.98■□□□□ 0.79
TRIM56-203ENST00000467847 DOCK5Q9H7D0 1870 aa19.97■□□□□ 0.79
TRIM56-203ENST00000467847 KCNQ1P51787 676 aa19.97■□□□□ 0.79
TRIM56-203ENST00000467847 HIC1Q14526 733 aa19.97■□□□□ 0.79
TRIM56-203ENST00000467847 MBTPS1Q14703 1052 aa19.97■□□□□ 0.79
TRIM56-203ENST00000467847 PIBF1Q8WXW3 757 aa19.97■□□□□ 0.79
TRIM56-203ENST00000467847 LRFN3Q9BTN0 628 aa19.97■□□□□ 0.79
TRIM56-203ENST00000467847 ARIH1Q9Y4X5 557 aaPredicted RBP19.97■□□□□ 0.79
TRIM56-203ENST00000467847 GJB5O95377 273 aa19.96■□□□□ 0.79
TRIM56-203ENST00000467847 THPOP40225 353 aa19.96■□□□□ 0.79
TRIM56-203ENST00000467847 GNPTABQ3T906 1256 aa19.96■□□□□ 0.79
TRIM56-203ENST00000467847 TMEM31Q5JXX7 168 aa19.96■□□□□ 0.79
TRIM56-203ENST00000467847 SERINC5Q86VE9 423 aa19.96■□□□□ 0.79
TRIM56-203ENST00000467847 RAD9AQ99638 391 aa19.96■□□□□ 0.79
TRIM56-203ENST00000467847 COG5Q9UP83 839 aa19.96■□□□□ 0.79
TRIM56-203ENST00000467847 SUPT16HQ9Y5B9 1047 aaKnown RBP19.96■□□□□ 0.79
TRIM56-203ENST00000467847 EMSYQ7Z589 1322 aa19.96■□□□□ 0.79
TRIM56-203ENST00000467847 MICAL3Q7RTP6 2002 aa19.95■□□□□ 0.78
TRIM56-203ENST00000467847 C17orf102A2RUQ5 167 aa19.95■□□□□ 0.78
TRIM56-203ENST00000467847 H3BRB1 525 aa19.95■□□□□ 0.78
TRIM56-203ENST00000467847 NOP56O00567 594 aaKnown RBP19.95■□□□□ 0.78
TRIM56-203ENST00000467847 SGSM2O43147 1006 aa19.95■□□□□ 0.78
TRIM56-203ENST00000467847 LPXNO60711 386 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms