RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 MYSM1Q5VVJ2 828 aa19.39■□□□□ 0.69
VARS2-204ENST00000467717 IQSEC1Q6DN90 963 aa19.39■□□□□ 0.69
VARS2-204ENST00000467717 PLA2G4DQ86XP0 818 aa19.39■□□□□ 0.69
VARS2-204ENST00000467717 FOXD4L4Q8WXT5 416 aaPredicted RBP19.39■□□□□ 0.69
VARS2-204ENST00000467717 WDR11Q9BZH6 1224 aa19.39■□□□□ 0.69
VARS2-204ENST00000467717 KCNH7Q9NS40 1196 aa19.39■□□□□ 0.69
VARS2-204ENST00000467717 DDX25Q9UHL0 483 aaKnown RBP19.39■□□□□ 0.69
VARS2-204ENST00000467717 FAM184BQ9ULE4 1060 aa19.39■□□□□ 0.69
VARS2-204ENST00000467717 ZDHHC9Q9Y397 364 aa19.39■□□□□ 0.69
VARS2-204ENST00000467717 MRVI1Q9Y6F6 885 aa19.39■□□□□ 0.69
VARS2-204ENST00000467717 SEPT4O43236 478 aa19.38■□□□□ 0.69
VARS2-204ENST00000467717 ADCYAP1R1P41586 468 aa19.38■□□□□ 0.69
VARS2-204ENST00000467717 ORC2Q13416 577 aaPredicted RBP19.38■□□□□ 0.69
VARS2-204ENST00000467717 CCDC144BQ3MJ40 725 aa19.38■□□□□ 0.69
VARS2-204ENST00000467717 TTC38Q5R3I4 469 aa19.38■□□□□ 0.69
VARS2-204ENST00000467717 LENG9Q96B70 501 aa19.38■□□□□ 0.69
VARS2-204ENST00000467717 ARMC5Q96C12 935 aa19.38■□□□□ 0.69
VARS2-204ENST00000467717 HMX1Q9NP08 348 aaPredicted RBP19.38■□□□□ 0.69
VARS2-204ENST00000467717 CENPFP49454 3210 aa19.38■□□□□ 0.69
VARS2-204ENST00000467717 AKR1A1P14550 325 aa19.37■□□□□ 0.69
VARS2-204ENST00000467717 CNGA1P29973 690 aa19.37■□□□□ 0.69
VARS2-204ENST00000467717 CCND3P30281 292 aaPredicted RBP19.37■□□□□ 0.69
VARS2-204ENST00000467717 CCDC62Q6P9F0 684 aa19.37■□□□□ 0.69
VARS2-204ENST00000467717 DDX41Q9UJV9 622 aaKnown RBP19.37■□□□□ 0.69
VARS2-204ENST00000467717 LCTP09848 1927 aa19.37■□□□□ 0.69
VARS2-204ENST00000467717 ZNFX1Q9P2E3 1918 aaKnown RBP19.36■□□□□ 0.69
VARS2-204ENST00000467717 WNT7AO00755 349 aa19.36■□□□□ 0.69
VARS2-204ENST00000467717 SLC37A4O43826 429 aa19.36■□□□□ 0.69
VARS2-204ENST00000467717 ARIH2O95376 493 aa19.36■□□□□ 0.69
VARS2-204ENST00000467717 ARP10275 920 aa19.36■□□□□ 0.69
VARS2-204ENST00000467717 TXNP10599 105 aaKnown RBP19.36■□□□□ 0.69
VARS2-204ENST00000467717 TNFAIP2Q03169 654 aa19.36■□□□□ 0.69
VARS2-204ENST00000467717 SEMA3FQ13275 785 aa19.36■□□□□ 0.69
VARS2-204ENST00000467717 ZNF174Q15697 407 aa19.36■□□□□ 0.69
VARS2-204ENST00000467717 DUSP28Q4G0W2 176 aa19.36■□□□□ 0.69
VARS2-204ENST00000467717 FAM173BQ6P4H8 233 aa19.36■□□□□ 0.69
VARS2-204ENST00000467717 ZNF333Q96JL9 665 aa19.36■□□□□ 0.69
VARS2-204ENST00000467717 SENP7Q9BQF6 1050 aa19.36■□□□□ 0.69
VARS2-204ENST00000467717 AGO4Q9HCK5 861 aaKnown RBP19.36■□□□□ 0.69
VARS2-204ENST00000467717 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.35■□□□□ 0.69
VARS2-204ENST00000467717 NKRFO15226 690 aaKnown RBP eCLIP19.35■□□□□ 0.69
VARS2-204ENST00000467717 NEMFO60524 1076 aa19.35■□□□□ 0.69
VARS2-204ENST00000467717 SMPD1P17405 629 aa19.35■□□□□ 0.69
VARS2-204ENST00000467717 MCM7P33993 719 aa19.35■□□□□ 0.69
VARS2-204ENST00000467717 NEDD9Q14511 834 aa19.35■□□□□ 0.69
VARS2-204ENST00000467717 NBR1Q14596 966 aa19.35■□□□□ 0.69
VARS2-204ENST00000467717 GIMAP8Q8ND71 665 aaPredicted RBP19.35■□□□□ 0.69
VARS2-204ENST00000467717 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.35■□□□□ 0.69
VARS2-204ENST00000467717 DDX20Q9UHI6 824 aaKnown RBP19.35■□□□□ 0.69
VARS2-204ENST00000467717 PCDHB6Q9Y5E3 794 aa19.35■□□□□ 0.69
VARS2-204ENST00000467717 ATP6V1DQ9Y5K8 247 aa19.35■□□□□ 0.69
VARS2-204ENST00000467717 TBX3O15119 743 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 MSH4O15457 936 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 MSCO60682 206 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 ATP9AO75110 1047 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 UBA1P22314 1058 aaKnown RBP19.34■□□□□ 0.69
VARS2-204ENST00000467717 SP2Q02086 613 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 MTFR1Q15390 333 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 LY6KQ17RY6 165 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 ZNF396Q96N95 335 aaPredicted RBP19.34■□□□□ 0.69
VARS2-204ENST00000467717 ZNF577Q9BSK1 485 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.34■□□□□ 0.693e-13■■□□□ 12.4
VARS2-204ENST00000467717 UNC93B1Q9H1C4 597 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 KCNMB3Q9NPA1 279 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 CHMP5Q9NZZ3 219 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 PKD2L1Q9P0L9 805 aa19.34■□□□□ 0.69
VARS2-204ENST00000467717 IPO5O00410 1097 aaKnown RBP19.33■□□□□ 0.68
VARS2-204ENST00000467717 ADCY6O43306 1168 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 MARCH6O60337 910 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 DUSP11O75319 330 aaKnown RBP19.33■□□□□ 0.68
VARS2-204ENST00000467717 RARBP10826 455 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 CCL5P13501 91 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 KCNA2P16389 499 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 CALCRLQ16602 461 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 TMEM63BQ5T3F8 832 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 ETNPPLQ8TBG4 499 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 FAM20AQ96MK3 541 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 SDF4Q9BRK5 362 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 RNF208Q9H0X6 261 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 TBC1D22BQ9NU19 505 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 GNEQ9Y223 722 aaKnown RBP19.33■□□□□ 0.68
VARS2-204ENST00000467717 Q9Y3F1 56 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 PLXNA1Q9UIW2 1896 aa19.33■□□□□ 0.68
VARS2-204ENST00000467717 NFASCO94856 1347 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 BAG4O95429 457 aaKnown RBP19.32■□□□□ 0.68
VARS2-204ENST00000467717 GGPS1O95749 300 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 BMP15O95972 392 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 MYCP01106 439 aaPredicted RBP19.32■□□□□ 0.68
VARS2-204ENST00000467717 GH1P01241 217 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 ITGB3BPQ13352 177 aaPredicted RBP19.32■□□□□ 0.68
VARS2-204ENST00000467717 LAMC2Q13753 1193 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 ATL3Q6DD88 541 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 DHX37Q8IY37 1157 aaKnown RBP19.32■□□□□ 0.68
VARS2-204ENST00000467717 SLFN12Q8IYM2 578 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 COPS5Q92905 334 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 SLC5A5Q92911 643 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 RIT2Q99578 217 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 MLXIPQ9HAP2 919 aa19.32■□□□□ 0.68
VARS2-204ENST00000467717 PAK6Q9NQU5 681 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms