RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 CEBPAP49715 358 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-209ENST00000467124 NEK2P51955 445 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 KPNA1P52294 538 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-209ENST00000467124 JAM2P57087 298 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 CHRNEQ04844 493 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 KIR3DS1Q14943 382 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 PPP2R5AQ15172 486 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 FAM47CQ5HY64 1035 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 NECAB2Q7Z6G3 386 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 ANKS4BQ8N8V4 417 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 HOOK2Q96ED9 719 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 MAP6Q96JE9 813 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 ALPK1Q96QP1 1244 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 POLR3GLQ9BT43 218 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 B4GALT6Q9UBX8 382 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 EBF1Q9UH73 591 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 APOBEC2Q9Y235 224 aaKnown RBP5.53□□□□□ -1.52
VPS13A-209ENST00000467124 TNKSO95271 1327 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 A0A1W2PQ45 241 aaPredicted RBP5.52□□□□□ -1.53
VPS13A-209ENST00000467124 A0A1W2PQY0 241 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 USP2O75604 605 aaPredicted RBP5.52□□□□□ -1.53
VPS13A-209ENST00000467124 MAP4K4O95819 1239 aaPredicted RBP5.52□□□□□ -1.53
VPS13A-209ENST00000467124 FURINP09958 794 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 MYBL2P10244 700 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 SLC9A1P19634 815 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 MECP2P51608 486 aaKnown RBP5.52□□□□□ -1.53
VPS13A-209ENST00000467124 CRY1Q16526 586 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 C14orf80Q86SX3 495 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 ZBTB46Q86UZ6 589 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 PTRH1Q86Y79 214 aaKnown RBP5.52□□□□□ -1.53
VPS13A-209ENST00000467124 RBM12BQ8IXT5 1001 aaKnown RBP5.52□□□□□ -1.53
VPS13A-209ENST00000467124 CMIPQ8IY22 773 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 Q8N1Y9 231 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 AGBL5Q8NDL9 886 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 LINC01599Q8WXQ3 324 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 TRMT2BQ96GJ1 504 aaKnown RBP5.52□□□□□ -1.53
VPS13A-209ENST00000467124 TMEM169Q96HH4 297 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 JMJD8Q96S16 334 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 ORAI3Q9BRQ5 295 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 KRTAP4-8Q9BYQ9 185 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 CDIP1Q9H305 208 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 CARS2Q9HA77 564 aaKnown RBP5.52□□□□□ -1.53
VPS13A-209ENST00000467124 OXSMQ9NWU1 459 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 ZIM2Q9NZV7 527 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 SLAMF8Q9P0V8 285 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 FBLN5Q9UBX5 448 aa5.52□□□□□ -1.53
VPS13A-209ENST00000467124 ANGEL1Q9UNK9 670 aaKnown RBP5.52□□□□□ -1.53
VPS13A-209ENST00000467124 C22orf46C9J442 243 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 NKRFO15226 690 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS13A-209ENST00000467124 AKAP10O43572 662 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 TSPAN6O43657 245 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 ZEB2O60315 1214 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 AMY2AP04746 511 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 GNAT1P11488 350 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 AMY2BP19961 511 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 LSSP48449 732 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 EPHB1P54762 984 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 ZP2Q05996 745 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 NFE2Q16621 373 aaPredicted RBP5.51□□□□□ -1.53
VPS13A-209ENST00000467124 PTPN21Q16825 1174 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 RALGPS1Q5JS13 557 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 CCDC181Q5TID7 509 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 SYDE2Q5VT97 1194 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 CPZQ66K79 652 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 CREB3L3Q68CJ9 461 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 SLC23A3Q6PIS1 610 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 C16orf59Q7L2K0 433 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 C11orf74Q86VG3 221 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 NLGN2Q8NFZ4 835 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 USP33Q8TEY7 942 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 HHIPL1Q96JK4 782 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 G6PC3Q9BUM1 346 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 CD244Q9BZW8 370 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 PUS7LQ9H0K6 701 aaKnown RBP5.51□□□□□ -1.53
VPS13A-209ENST00000467124 ADAMTS10Q9H324 1103 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 SMURF1Q9HCE7 757 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 PRDM7Q9NQW5 492 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 CCDC39Q9UFE4 941 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 ADGRE2Q9UHX3 823 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 TMEM59LQ9UK28 342 aa5.51□□□□□ -1.53
VPS13A-209ENST00000467124 TCRBV5S4A2TA0A5A2 114 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 FADS2P1A8MWK0 482 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 H7BY64 318 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 SCDO00767 359 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 GSTA4O15217 222 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 TGM5O43548 720 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 ZGLP1P0C6A0 271 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 FUT4P22083 530 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 GALK1P51570 392 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 ZNF574Q6ZN55 896 aaPredicted RBP5.5□□□□□ -1.53
VPS13A-209ENST00000467124 ARHGAP36Q6ZRI8 547 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 SLCO6A1Q86UG4 719 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 KIF18BQ86Y91 864 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 WFDC3Q8IUB2 231 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 SPPL2CQ8IUH8 684 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 OXR1Q8N573 874 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 CLRN3Q8NCR9 226 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 PDZD8Q8NEN9 1154 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 PIP4K2CQ8TBX8 421 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 RTFDC1Q9BY42 306 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms