RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 SPATA33Q96N06 139 aa13.87□□□□□ -0.19
GTF3A-205ENST00000466776 PDCD2LQ9BRP1 358 aa13.87□□□□□ -0.19
GTF3A-205ENST00000466776 CERS4Q9HA82 394 aa13.87□□□□□ -0.19
GTF3A-205ENST00000466776 HDAC6Q9UBN7 1215 aa13.87□□□□□ -0.19
GTF3A-205ENST00000466776 COG5Q9UP83 839 aa13.87□□□□□ -0.19
GTF3A-205ENST00000466776 MTCH2Q9Y6C9 303 aa13.87□□□□□ -0.19
GTF3A-205ENST00000466776 GCOM1H8Y6P7 765 aaPredicted RBP13.86□□□□□ -0.19
GTF3A-205ENST00000466776 PPFIA4O75335 1185 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 POLR2MP0CAP2 368 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 ZNF286BP0CG31 522 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 CCND2P30279 289 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 WDR5P61964 334 aaKnown RBP13.86□□□□□ -0.19
GTF3A-205ENST00000466776 IKBKEQ14164 716 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 SEC23AQ15436 765 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 GNPTABQ3T906 1256 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 STOX1Q6ZVD7 989 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 HOMER1Q86YM7 354 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 STAG2Q8N3U4 1231 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 MTMR8Q96EF0 704 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 YTHDC1Q96MU7 727 aaKnown RBP13.86□□□□□ -0.19
GTF3A-205ENST00000466776 MLXIPQ9HAP2 919 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 MAD2L2Q9UI95 211 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 EMSYQ7Z589 1322 aa13.86□□□□□ -0.19
GTF3A-205ENST00000466776 NLRC5Q86WI3 1866 aa13.85□□□□□ -0.19
GTF3A-205ENST00000466776 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
GTF3A-205ENST00000466776 HAS3O00219 553 aa13.85□□□□□ -0.19
GTF3A-205ENST00000466776 IFIT3O14879 490 aaKnown RBP13.85□□□□□ -0.19
GTF3A-205ENST00000466776 GGPS1O95749 300 aa13.85□□□□□ -0.19
GTF3A-205ENST00000466776 CXCL10P02778 98 aa13.85□□□□□ -0.19
GTF3A-205ENST00000466776 GRM4Q14833 912 aa13.85□□□□□ -0.19
GTF3A-205ENST00000466776 PGM5Q15124 567 aa13.85□□□□□ -0.19
GTF3A-205ENST00000466776 CELF3Q5SZQ8 465 aaKnown RBP13.85□□□□□ -0.19
GTF3A-205ENST00000466776 VSIG10LQ86VR7 867 aa13.85□□□□□ -0.19
GTF3A-205ENST00000466776 RFXAPO00287 272 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 NOP56O00567 594 aaKnown RBP13.84□□□□□ -0.19
GTF3A-205ENST00000466776 STAM2O75886 525 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 HOXD8P13378 290 aaPredicted RBP13.84□□□□□ -0.19
GTF3A-205ENST00000466776 HOXA13P31271 388 aaPredicted RBP13.84□□□□□ -0.19
GTF3A-205ENST00000466776 WTAPQ15007 396 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 TTC22Q5TAA0 569 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 MYSM1Q5VVJ2 828 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 CYB5R4Q7L1T6 521 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 FCHSD1Q86WN1 690 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 NCOA7Q8NI08 942 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 EXOC6Q8TAG9 804 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 DHX38Q92620 1227 aaKnown RBP13.84□□□□□ -0.19
GTF3A-205ENST00000466776 HLA-CQ95604 372 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 CTAGE1Q96RT6 745 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 RAD9AQ99638 391 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 LMCD1Q9NZU5 365 aa13.84□□□□□ -0.19
GTF3A-205ENST00000466776 MUC3AQ02505 3323 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 REV3LO60673 3130 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 RALGAPA2Q2PPJ7 1873 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 PNMA6FA0A0J9YX94 578 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 OPLAHO14841 1288 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 NBNO60934 754 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 LGR5O75473 907 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 GJB5O95377 273 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 COL9A1P20849 921 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 UBA1P22314 1058 aaKnown RBP13.83□□□□□ -0.2
GTF3A-205ENST00000466776 TFF2Q03403 129 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 GRB10Q13322 594 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 HSDL1Q3SXM5 330 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 CATIPQ7Z7H3 387 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 TGS1Q96RS0 853 aaKnown RBP13.83□□□□□ -0.2
GTF3A-205ENST00000466776 PIGSQ96S52 555 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
GTF3A-205ENST00000466776 C17orf102A2RUQ5 167 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 EPOPA6NHQ4 379 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 H3BRB1 525 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 SORBS3O60504 671 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 PPP1R11O60927 126 aaPredicted RBP13.82□□□□□ -0.2
GTF3A-205ENST00000466776 AMHP03971 560 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 CYP21A2P08686 494 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 GNAT1P11488 350 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 BMP1P13497 986 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 THPOP40225 353 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 DEFB103AP81534 67 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 NEDD9Q14511 834 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 ZNF618Q5T7W0 954 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 CUL5Q93034 780 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 ATP6V0A1Q93050 837 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 C1QTNF1Q9BXJ1 281 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 TUT1Q9H6E5 874 aaKnown RBP13.82□□□□□ -0.2
GTF3A-205ENST00000466776 ZNF215Q9UL58 517 aaPredicted RBP13.82□□□□□ -0.2
GTF3A-205ENST00000466776 INSL6Q9Y581 213 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 BRWD1Q9NSI6 2320 aa13.82□□□□□ -0.2
GTF3A-205ENST00000466776 RSPH10B2B2RC85 870 aa13.81□□□□□ -0.2
GTF3A-205ENST00000466776 CAND2O75155 1236 aa13.81□□□□□ -0.2
GTF3A-205ENST00000466776 RGS20O76081 388 aa13.81□□□□□ -0.2
GTF3A-205ENST00000466776 RSPH10BP0C881 870 aa13.81□□□□□ -0.2
GTF3A-205ENST00000466776 KIF5BP33176 963 aa13.81□□□□□ -0.2
GTF3A-205ENST00000466776 KCNQ1P51787 676 aa13.81□□□□□ -0.2
GTF3A-205ENST00000466776 GPNMBQ14956 572 aa13.81□□□□□ -0.2
GTF3A-205ENST00000466776 TRIM71Q2Q1W2 868 aaKnown RBP13.81□□□□□ -0.2
GTF3A-205ENST00000466776 SERINC5Q86VE9 423 aa13.81□□□□□ -0.2
GTF3A-205ENST00000466776 IL31RAQ8NI17 732 aa13.81□□□□□ -0.2
GTF3A-205ENST00000466776 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
GTF3A-205ENST00000466776 USP26Q9BXU7 913 aa13.81□□□□□ -0.2
GTF3A-205ENST00000466776 SEC63Q9UGP8 760 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms