RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 C8BP07358 591 aa5.99□□□□□ -1.45
VPS13D-203ENST00000466732 C6orf222P0C671 652 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-203ENST00000466732 GRK2P25098 689 aa5.99□□□□□ -1.45
VPS13D-203ENST00000466732 GRK3P35626 688 aa5.99□□□□□ -1.45
VPS13D-203ENST00000466732 HTRA3P83110 453 aa5.99□□□□□ -1.45
VPS13D-203ENST00000466732 CAP1Q01518 475 aa5.99□□□□□ -1.45
VPS13D-203ENST00000466732 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS13D-203ENST00000466732 FNIP1Q8TF40 1166 aa5.99□□□□□ -1.45
VPS13D-203ENST00000466732 DHRS4Q9BTZ2 278 aa5.99□□□□□ -1.45
VPS13D-203ENST00000466732 TRAF6Q9Y4K3 522 aa5.99□□□□□ -1.45
VPS13D-203ENST00000466732 PCDHB4Q9Y5E5 795 aa5.99□□□□□ -1.45
VPS13D-203ENST00000466732 FFAR3O14843 346 aa5.98□□□□□ -1.45
VPS13D-203ENST00000466732 VWA3BQ502W6 1294 aa5.98□□□□□ -1.45
VPS13D-203ENST00000466732 MAMDC2Q7Z304 686 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-203ENST00000466732 FAM126BQ8IXS8 530 aa5.98□□□□□ -1.45
VPS13D-203ENST00000466732 FAM26EQ8N5C1 309 aa5.98□□□□□ -1.45
VPS13D-203ENST00000466732 PTPRN2Q92932 1015 aa5.98□□□□□ -1.45
VPS13D-203ENST00000466732 DDX11Q96FC9 970 aa5.98□□□□□ -1.45
VPS13D-203ENST00000466732 NOX5Q96PH1 765 aa5.98□□□□□ -1.45
VPS13D-203ENST00000466732 MRPS23Q9Y3D9 190 aaKnown RBP5.98□□□□□ -1.45
VPS13D-203ENST00000466732 TCRBV5S2A0A599 114 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 AQP7O14520 342 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 TRIM13O60858 407 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 SOD2P04179 222 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 CYP2C8P10632 490 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 BMP7P18075 431 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 ZC3H12BQ5HYM0 836 aaKnown RBP5.97□□□□□ -1.45
VPS13D-203ENST00000466732 CD300LDQ6UXZ3 194 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 OTOP3Q7RTS5 596 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 JMYQ8N9B5 988 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 LINC01356Q8N9X3 169 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 TP53I13Q8NBR0 393 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-203ENST00000466732 ARRDC4Q8NCT1 418 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 PIP4K2CQ8TBX8 421 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 UBXN4Q92575 508 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 KISS1RQ969F8 398 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-203ENST00000466732 KCNJ15Q99712 375 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 SYT3Q9BQG1 590 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 SMOC1Q9H4F8 434 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 SLC6A20Q9NP91 592 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 MYOTQ9UBF9 498 aa5.97□□□□□ -1.45
VPS13D-203ENST00000466732 CDK11AQ9UQ88 783 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-203ENST00000466732 KRIT1O00522 736 aa5.96□□□□□ -1.46
VPS13D-203ENST00000466732 STAT5AP42229 794 aa5.96□□□□□ -1.46
VPS13D-203ENST00000466732 GABREP78334 506 aa5.96□□□□□ -1.46
VPS13D-203ENST00000466732 BMS1Q14692 1282 aaKnown RBP5.96□□□□□ -1.46
VPS13D-203ENST00000466732 NFE2L2Q16236 605 aa5.96□□□□□ -1.46
VPS13D-203ENST00000466732 CYP4F22Q6NT55 531 aa5.96□□□□□ -1.46
VPS13D-203ENST00000466732 SAPCD2Q86UD0 394 aa5.96□□□□□ -1.46
VPS13D-203ENST00000466732 ZC3H18Q86VM9 953 aaKnown RBP5.96□□□□□ -1.46
VPS13D-203ENST00000466732 LILRB2Q8N423 598 aa5.96□□□□□ -1.46
VPS13D-203ENST00000466732 MARCH10Q8NA82 808 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-203ENST00000466732 PHOSPHO1Q8TCT1 267 aa5.96□□□□□ -1.46
VPS13D-203ENST00000466732 THAP3Q8WTV1 239 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-203ENST00000466732 GORASP1Q9BQQ3 440 aa5.96□□□□□ -1.46
VPS13D-203ENST00000466732 ALG1Q9BT22 464 aa5.96□□□□□ -1.46
VPS13D-203ENST00000466732 IPPKQ9H8X2 491 aa5.96□□□□□ -1.46
VPS13D-203ENST00000466732 FAM47E-STBD1D6RA91 191 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 SLC27A2O14975 620 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 MAFKO60675 156 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 GNAT1P11488 350 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 COL6A2P12110 1019 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 DLX2Q07687 328 aaPredicted RBP5.95□□□□□ -1.46
VPS13D-203ENST00000466732 CR1LQ2VPA4 569 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 C2orf27AQ580R0 203 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 MTDHQ86UE4 582 aaKnown RBP5.95□□□□□ -1.46
VPS13D-203ENST00000466732 ADGRG2Q8IZP9 1017 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 LINC00482Q8N8I6 264 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 ZNF526Q8TF50 670 aaPredicted RBP5.95□□□□□ -1.46
VPS13D-203ENST00000466732 KCNC2Q96PR1 638 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 YIPF4Q9BSR8 244 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 LNPKQ9C0E8 428 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 PCDH18Q9HCL0 1135 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 NGRNQ9NPE2 291 aaKnown RBP5.95□□□□□ -1.46
VPS13D-203ENST00000466732 DTLQ9NZJ0 730 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 ASH2LQ9UBL3 628 aa5.95□□□□□ -1.46
VPS13D-203ENST00000466732 A0A1B0GTL3 188 aa5.94□□□□□ -1.46
VPS13D-203ENST00000466732 INHBBP09529 407 aa5.94□□□□□ -1.46
VPS13D-203ENST00000466732 SPIRE1Q08AE8 756 aa5.94□□□□□ -1.46
VPS13D-203ENST00000466732 SMAD4Q13485 552 aaKnown RBP5.94□□□□□ -1.46
VPS13D-203ENST00000466732 HABP4Q5JVS0 413 aaKnown RBP5.94□□□□□ -1.46
VPS13D-203ENST00000466732 ZSWIM2Q8NEG5 633 aa5.94□□□□□ -1.46
VPS13D-203ENST00000466732 UHMK1Q8TAS1 419 aaKnown RBP5.94□□□□□ -1.46
VPS13D-203ENST00000466732 ZBTB8AQ96BR9 441 aa5.94□□□□□ -1.46
VPS13D-203ENST00000466732 TOE1Q96GM8 510 aaKnown RBP5.94□□□□□ -1.46
VPS13D-203ENST00000466732 C11orf84Q9BUA3 381 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-203ENST00000466732 ZCCHC4Q9H5U6 513 aa5.94□□□□□ -1.46
VPS13D-203ENST00000466732 ZSWIM4Q9H7M6 989 aa5.94□□□□□ -1.46
VPS13D-203ENST00000466732 PARD6AQ9NPB6 346 aa5.94□□□□□ -1.46
VPS13D-203ENST00000466732 SPATA6Q9NWH7 488 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-203ENST00000466732 PCDHA8Q9Y5H6 950 aa5.94□□□□□ -1.46
VPS13D-203ENST00000466732 PTCH2Q9Y6C5 1203 aa5.94□□□□□ -1.46
VPS13D-203ENST00000466732 SH3D21A4FU49 640 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 NKRFO15226 690 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS13D-203ENST00000466732 LRG1P02750 347 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 NKX3-2P78367 333 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 GUCY1A3Q02108 690 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 PAK1Q13153 545 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 CCDC144BQ3MJ40 725 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 TEPPQ6URK8 271 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms