RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 AKR1B10O60218 316 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 GDF11O95390 407 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 USH1GQ495M9 461 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 LRRC55Q6ZSA7 311 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 CCDC170Q8IYT3 715 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 MYOCDQ8IZQ8 938 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 DNAJC19Q96DA6 116 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 IFIH1Q9BYX4 1025 aaKnown RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 QTRT2Q9H974 415 aaKnown RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 POLD4Q9HCU8 107 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 FOCADQ5VW36 1801 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 MAP2K7O14733 419 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 ERLIN1O75477 346 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 IKQ13123 557 aaPredicted RBP11.55□□□□□ -0.56
UFD1-206ENST00000466373 SEPT2Q15019 361 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 ENOX2Q16206 610 aaKnown RBP11.55□□□□□ -0.56
UFD1-206ENST00000466373 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 CACNA2D4Q7Z3S7 1137 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 L1RE1Q9UN81 338 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 PLAGL2Q9UPG8 496 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 CAPN6Q9Y6Q1 641 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 PDE2AO00408 941 aaPredicted RBP11.55□□□□□ -0.56
UFD1-206ENST00000466373 MEIS1O00470 390 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 ONECUT3O60422 494 aaPredicted RBP11.55□□□□□ -0.56
UFD1-206ENST00000466373 PHACTR2O75167 634 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 KIF11P52732 1056 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 VAV2P52735 878 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 MRPS25P82663 173 aaKnown RBP11.55□□□□□ -0.56
UFD1-206ENST00000466373 CERKLQ49MI3 558 aaPredicted RBP11.55□□□□□ -0.56
UFD1-206ENST00000466373 CCDC40Q4G0X9 1142 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 HERC4Q5GLZ8 1057 aaPredicted RBP11.55□□□□□ -0.56
UFD1-206ENST00000466373 FAM26FQ5R3K3 315 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 SLFN13Q68D06 897 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 HDXQ7Z353 690 aa11.55□□□□□ -0.56
UFD1-206ENST00000466373 SECISBP2LQ93073 1101 aaKnown RBP11.55□□□□□ -0.56
UFD1-206ENST00000466373 POTEFA5A3E0 1075 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 MOCS3O95396 460 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 KRT18P05783 430 aaKnown RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 POTEIP0CG38 1075 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 CXCR5P32302 372 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 LRRC63Q05C16 580 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 CDC37Q16543 378 aaPredicted RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 POTEGQ6S5H5 508 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 GPBP1Q86WP2 473 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 P2RX7Q99572 595 aaKnown RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 TSG101Q99816 390 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 TMX4Q9H1E5 349 aaPredicted RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 BMP2KQ9NSY1 1161 aaPredicted RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 SUGT1Q9Y2Z0 365 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 PCDHA13Q9Y5I0 950 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 A0A1W2PQJ5 194 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 MMP10P09238 476 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 PLA2G4BP0C869 781 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 CYP2C19P33261 490 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 ARID5AQ03989 594 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 GFPT1Q06210 699 aaPredicted RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 EHHADHQ08426 723 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 COBLL1Q53SF7 1204 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 PRR16Q569H4 304 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 PAPD7Q5XG87 772 aaKnown RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 COL23A1Q86Y22 540 aaPredicted RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 GSPT2Q8IYD1 628 aaKnown RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 EHBP1Q8NDI1 1231 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 HNRNPLLQ8WVV9 542 aaKnown RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 TRIM34Q9BYJ4 488 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 ANO3Q9BYT9 981 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 FGFR1OPO95684 399 aaKnown RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 NPR1P16066 1061 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 C2orf54Q08AI8 447 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 CASP8Q14790 479 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 TDRD12Q587J7 1177 aaKnown RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 FIGNQ5HY92 759 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 PPP1R18Q6NYC8 613 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 HHIPL2Q6UWX4 724 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 CCDC84Q86UT8 332 aaPredicted RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.54□□□□□ -0.56
UFD1-206ENST00000466373 VPS18Q9P253 973 aa11.54□□□□□ -0.56
UFD1-206ENST00000466373 MED24O75448 989 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 MATR3P43243 847 aaKnown RBP eCLIP11.53□□□□□ -0.56
UFD1-206ENST00000466373 DNA2P51530 1060 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 FKBP3Q00688 224 aaKnown RBP11.53□□□□□ -0.56
UFD1-206ENST00000466373 KCNMA1Q12791 1236 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 SH3BP5LQ7L8J4 393 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 TMC4Q7Z404 712 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 SPICE1Q8N0Z3 855 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 CCDC102AQ96A19 550 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 SMARCAL1Q9NZC9 954 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
UFD1-206ENST00000466373 COL4A3BPQ9Y5P4 624 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 LTBP1Q14766 1721 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 LRRIQ3A6PVS8 624 aaPredicted RBP11.53□□□□□ -0.56
UFD1-206ENST00000466373 HSPA1LP34931 641 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 TNNT3P45378 269 aaPredicted RBP11.53□□□□□ -0.56
UFD1-206ENST00000466373 PSMC6P62333 389 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 RASSF7Q02833 373 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 SLC30A10Q6XR72 485 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 KRT27Q7Z3Y8 459 aa11.53□□□□□ -0.56
UFD1-206ENST00000466373 COG1Q8WTW3 980 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms