RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 RPAP2Q8IXW5 612 aaPredicted RBP7.77□□□□□ -1.17
TPM3-214ENST00000466010 REXO1Q8N1G1 1221 aaKnown RBP7.77□□□□□ -1.17
TPM3-214ENST00000466010 LILRB2Q8N423 598 aa7.77□□□□□ -1.17
TPM3-214ENST00000466010 TRERF1Q96PN7 1200 aa7.77□□□□□ -1.17
TPM3-214ENST00000466010 DHX36Q9H2U1 1008 aaKnown RBP7.77□□□□□ -1.17
TPM3-214ENST00000466010 PICK1Q9NRD5 415 aa7.77□□□□□ -1.17
TPM3-214ENST00000466010 TMEM39AQ9NV64 488 aa7.77□□□□□ -1.17
TPM3-214ENST00000466010 RAI14Q9P0K7 980 aa7.77□□□□□ -1.17
TPM3-214ENST00000466010 HMG20BQ9P0W2 317 aa7.77□□□□□ -1.17
TPM3-214ENST00000466010 FZD1Q9UP38 647 aa7.77□□□□□ -1.17
TPM3-214ENST00000466010 PPME1Q9Y570 386 aa7.77□□□□□ -1.17
TPM3-214ENST00000466010 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.77□□□□□ -1.17
TPM3-214ENST00000466010 SNCAIPQ9Y6H5 919 aa7.77□□□□□ -1.17
TPM3-214ENST00000466010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.77□□□□□ -1.17
TPM3-214ENST00000466010 RFX7Q2KHR2 1363 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 CXCL11O14625 94 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 KHNYNO15037 678 aaKnown RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 ATXN7O15265 892 aaPredicted RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 GDF9O60383 454 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 CTNND1O60716 968 aaKnown RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 RGS3P49796 1198 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 GYS2P54840 703 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 NFIAQ12857 509 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 SFSWAPQ12872 951 aaKnown RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 PDE3AQ14432 1141 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 KIF22Q14807 665 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 LRRC14Q15048 493 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 LARP1BQ659C4 914 aaKnown RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 NAA16Q6N069 864 aaPredicted RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 CEP85Q6P2H3 762 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 BNC2Q6ZN30 1099 aaPredicted RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 FASTKD5Q7L8L6 764 aaKnown RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 SYNPOQ8N3V7 929 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 FAM169BQ8N8A8 192 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 TMEM102Q8N9M5 508 aaPredicted RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 ASAP3Q8TDY4 903 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 THAP3Q8WTV1 239 aaPredicted RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 BRI3BPQ8WY22 251 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 HPS1Q92902 700 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 ZKSCAN4Q969J2 545 aaPredicted RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 NSUN4Q96CB9 384 aaKnown RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 GAS2L1Q99501 681 aaPredicted RBP7.76□□□□□ -1.17
TPM3-214ENST00000466010 PTPN18Q99952 460 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 IRF2BPLQ9H1B7 796 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 ZNF576Q9H609 170 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 RCAN3Q9UKA8 241 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 CYP8B1Q9UNU6 501 aa7.76□□□□□ -1.17
TPM3-214ENST00000466010 TNFRSF10AO00220 468 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 TLR2O60603 784 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 MAP3K6O95382 1288 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 MCAMP43121 646 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 PRMT2P55345 433 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 TTF1Q15361 905 aaPredicted RBP7.75□□□□□ -1.17
TPM3-214ENST00000466010 SPRED3Q2MJR0 410 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 PLEKHG6Q3KR16 790 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 C2orf27AQ580R0 203 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 MRPL14Q6P1L8 145 aaKnown RBP7.75□□□□□ -1.17
TPM3-214ENST00000466010 MIGA2Q7L4E1 593 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 REC114Q7Z4M0 266 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 ANKRD23Q86SG2 305 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 SCYL3Q8IZE3 742 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 CLASRPQ8N2M8 674 aaKnown RBP7.75□□□□□ -1.17
TPM3-214ENST00000466010 CEP120Q8N960 986 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 KIF1BPQ96EK5 621 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 PARK7Q99497 189 aaKnown RBP7.75□□□□□ -1.17
TPM3-214ENST00000466010 TYW1Q9NV66 732 aaKnown RBP7.75□□□□□ -1.17
TPM3-214ENST00000466010 DDX56Q9NY93 547 aaKnown RBP7.75□□□□□ -1.17
TPM3-214ENST00000466010 HERC5Q9UII4 1024 aaKnown RBP7.75□□□□□ -1.17
TPM3-214ENST00000466010 TNNQ9UQP3 1299 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 SLC45A1Q9Y2W3 748 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 OTOFQ9HC10 1997 aa7.75□□□□□ -1.17
TPM3-214ENST00000466010 EFSO43281 561 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 ACPPP15309 386 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 RHBDL3P58872 404 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 MAP3K12Q12852 859 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 PICALMQ13492 652 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 TCEA2Q15560 299 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 PPP2R5EQ16537 467 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 GK5Q6ZS86 529 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 OTOP1Q7RTM1 612 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 NBPF11Q86T75 865 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 FBXO27Q8NI29 283 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 PANK1Q8TE04 598 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 NXPE3Q969Y0 559 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 OSBPL5Q9H0X9 879 aaPredicted RBP7.74□□□□□ -1.17
TPM3-214ENST00000466010 RBSNQ9H1K0 784 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 KANSL2Q9H9L4 492 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 ZFATQ9P243 1243 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 PI4KBQ9UBF8 816 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 TRIM17Q9Y577 477 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 PCDHGC4Q9Y5F7 938 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 HTTP42858 3142 aa7.74□□□□□ -1.17
TPM3-214ENST00000466010 A0A0G2JLL6 359 aaPredicted RBP7.73□□□□□ -1.17
TPM3-214ENST00000466010 DCDC2BA2VCK2 349 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 FAM221AA4D161 298 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 METTL12A8MUP2 240 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 BTBD19C9JJ37 291 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 PDE2AO00408 941 aaPredicted RBP7.73□□□□□ -1.17
TPM3-214ENST00000466010 CILPO75339 1184 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 PAGE1O75459 146 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms