RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 NMT2O60551 498 aa21.74■■□□□ 1.07
SDF4-205ENST00000465727 ELF1P32519 619 aa21.74■■□□□ 1.07
SDF4-205ENST00000465727 NF2P35240 595 aa21.74■■□□□ 1.07
SDF4-205ENST00000465727 SNCBQ16143 134 aa21.74■■□□□ 1.07
SDF4-205ENST00000465727 TDRD12Q587J7 1177 aaKnown RBP21.74■■□□□ 1.07
SDF4-205ENST00000465727 CCDC114Q96M63 670 aa21.74■■□□□ 1.07
SDF4-205ENST00000465727 CEP72Q9P209 647 aa21.74■■□□□ 1.07
SDF4-205ENST00000465727 SLC12A6Q9UHW9 1150 aa21.74■■□□□ 1.07
SDF4-205ENST00000465727 TMEM59LQ9UK28 342 aa21.74■■□□□ 1.07
SDF4-205ENST00000465727 NKRFO15226 690 aaKnown RBP eCLIP21.73■■□□□ 1.072e-6■■■□□ 17
SDF4-205ENST00000465727 DYNLL1P63167 89 aaKnown RBP21.73■■□□□ 1.07
SDF4-205ENST00000465727 IFFO1Q0D2I5 559 aa21.73■■□□□ 1.07
SDF4-205ENST00000465727 DZIP3Q86Y13 1208 aaKnown RBP21.73■■□□□ 1.07
SDF4-205ENST00000465727 USP38Q8NB14 1042 aa21.73■■□□□ 1.07
SDF4-205ENST00000465727 PRDM11Q9NQV5 511 aa21.73■■□□□ 1.07
SDF4-205ENST00000465727 PAEPP09466 180 aa21.73■■□□□ 1.07
SDF4-205ENST00000465727 CHRNDQ07001 517 aa21.73■■□□□ 1.07
SDF4-205ENST00000465727 UNC13DQ70J99 1090 aa21.73■■□□□ 1.07
SDF4-205ENST00000465727 CADPS2Q86UW7 1296 aa21.73■■□□□ 1.07
SDF4-205ENST00000465727 CALML4Q96GE6 196 aa21.73■■□□□ 1.07
SDF4-205ENST00000465727 SLIT2O94813 1529 aa21.73■■□□□ 1.07
SDF4-205ENST00000465727 C5orf60A6NFR6 353 aa21.72■■□□□ 1.07
SDF4-205ENST00000465727 TSPY2A6NKD2 308 aa21.72■■□□□ 1.07
SDF4-205ENST00000465727 IL6STP40189 918 aaPredicted RBP21.72■■□□□ 1.07
SDF4-205ENST00000465727 ORC2Q13416 577 aaPredicted RBP21.72■■□□□ 1.07
SDF4-205ENST00000465727 MTMR3Q13615 1198 aa21.72■■□□□ 1.07
SDF4-205ENST00000465727 RCSD1Q6JBY9 416 aa21.72■■□□□ 1.07
SDF4-205ENST00000465727 DGKHQ86XP1 1220 aa21.72■■□□□ 1.07
SDF4-205ENST00000465727 SGSM3Q96HU1 749 aa21.72■■□□□ 1.07
SDF4-205ENST00000465727 PPANQ9NQ55 473 aaKnown RBP21.72■■□□□ 1.07
SDF4-205ENST00000465727 BARHL2Q9NY43 387 aa21.72■■□□□ 1.07
SDF4-205ENST00000465727 ARPP21Q9UBL0 812 aaPredicted RBP21.72■■□□□ 1.07
SDF4-205ENST00000465727 STK17AQ9UEE5 414 aa21.72■■□□□ 1.07
SDF4-205ENST00000465727 ITGB4P16144 1822 aa21.72■■□□□ 1.07
SDF4-205ENST00000465727 LAMB2P55268 1798 aa21.72■■□□□ 1.07
SDF4-205ENST00000465727 RAD51CO43502 376 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 LACTB2Q53H82 288 aaPredicted RBP21.71■■□□□ 1.07
SDF4-205ENST00000465727 FAM47AQ5JRC9 791 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 AGBL2Q5U5Z8 902 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 SFMBT2Q5VUG0 894 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 CYB5D1Q6P9G0 228 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 SV2BQ7L1I2 683 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 PARP9Q8IXQ6 854 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 PROM2Q8N271 834 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 SLC39A2Q9NP94 309 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 RIC8AQ9NPQ8 531 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 ATP8A2Q9NTI2 1148 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 DDX20Q9UHI6 824 aaKnown RBP21.71■■□□□ 1.07
SDF4-205ENST00000465727 ZBTB1Q9Y2K1 713 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 BTNL10A8MVZ5 291 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 H0YGN5 161 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 HPDP32754 393 aaPredicted RBP21.71■■□□□ 1.07
SDF4-205ENST00000465727 HSD17B3P37058 310 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 SLC18A3Q16572 532 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 SBK1Q52WX2 424 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 PAXIP1Q6ZW49 1069 aaPredicted RBP21.71■■□□□ 1.07
SDF4-205ENST00000465727 KRT25Q7Z3Z0 450 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 CALR3Q96L12 384 aaKnown RBP21.71■■□□□ 1.07
SDF4-205ENST00000465727 NFS1Q9Y697 457 aa21.71■■□□□ 1.07
SDF4-205ENST00000465727 KIAA1551Q9HCM1 1747 aa21.7■■□□□ 1.07
SDF4-205ENST00000465727 GRM4Q14833 912 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 ANKRD20A8PQ5CZ79 823 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 LRRC55Q6ZSA7 311 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 FUKQ8N0W3 1084 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 TAF4BQ92750 862 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 TSG101Q99816 390 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 CRNKL1Q9BZJ0 848 aaKnown RBP21.7■■□□□ 1.06
SDF4-205ENST00000465727 ODF2LQ9ULJ1 636 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 ATP6V0A2Q9Y487 856 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 COL1A1P02452 1464 aaPredicted RBP21.7■■□□□ 1.06
SDF4-205ENST00000465727 FTCDO95954 541 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 MRPL12P52815 198 aaKnown RBP21.7■■□□□ 1.06
SDF4-205ENST00000465727 HLTFQ14527 1009 aaKnown RBP eCLIP21.7■■□□□ 1.06
SDF4-205ENST00000465727 ANKS1AQ92625 1134 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 VEZTQ9HBM0 779 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 POLD4Q9HCU8 107 aa21.7■■□□□ 1.06
SDF4-205ENST00000465727 DCP1AQ9NPI6 582 aaPredicted RBP21.7■■□□□ 1.06
SDF4-205ENST00000465727 STXBP3O00186 592 aa21.69■■□□□ 1.06
SDF4-205ENST00000465727 SLC8A1P32418 973 aa21.69■■□□□ 1.06
SDF4-205ENST00000465727 PSMD2Q13200 908 aa21.69■■□□□ 1.06
SDF4-205ENST00000465727 CACNA2D3Q8IZS8 1091 aa21.69■■□□□ 1.06
SDF4-205ENST00000465727 STAG2Q8N3U4 1231 aa21.69■■□□□ 1.06
SDF4-205ENST00000465727 PNMA1Q8ND90 353 aa21.69■■□□□ 1.06
SDF4-205ENST00000465727 PBKQ96KB5 322 aa21.69■■□□□ 1.06
SDF4-205ENST00000465727 OSBPL7Q9BZF2 842 aa21.69■■□□□ 1.06
SDF4-205ENST00000465727 SCN7AQ01118 1682 aa21.69■■□□□ 1.06
SDF4-205ENST00000465727 BHMG1C9JSJ3 638 aaPredicted RBP21.68■■□□□ 1.06
SDF4-205ENST00000465727 CLGNO14967 610 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 KLRC1P26715 233 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 ECHS1P30084 290 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 CTNNA1P35221 906 aaKnown RBP21.68■■□□□ 1.06
SDF4-205ENST00000465727 PPP2R2AP63151 447 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 SUSD4Q5VX71 490 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 CENPHQ9H3R5 247 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 CCDC88AQ3V6T2 1871 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 ATAD5Q96QE3 1844 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 GHRP10912 638 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 EZRP15311 586 aaKnown RBP21.68■■□□□ 1.06
SDF4-205ENST00000465727 ERVK-9P63128 1117 aa21.68■■□□□ 1.06
SDF4-205ENST00000465727 EHHADHQ08426 723 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms