RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 TMEM60Q9H2L4 133 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 ISY1Q9ULR0 285 aaKnown RBP10.03□□□□□ -0.8
UBA3-208ENST00000465627 NOL7Q9UMY1 257 aaKnown RBP10.03□□□□□ -0.8
UBA3-208ENST00000465627 VPS9D1Q9Y2B5 631 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 HCN4Q9Y3Q4 1203 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 FRMPD4Q14CM0 1322 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 CUTAO60888 179 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 NR1I2O75469 434 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 MARCKSP29966 332 aaPredicted RBP10.02□□□□□ -0.8
UBA3-208ENST00000465627 SREBF1P36956 1147 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 ME1P48163 572 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 MRE11P49959 708 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 SREBF2Q12772 1141 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 PTGDRQ13258 359 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 TMEM132BQ14DG7 1078 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 ZNF174Q15697 407 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 ARL6IP4Q66PJ3 421 aaKnown RBP10.02□□□□□ -0.8
UBA3-208ENST00000465627 PPP4R3AQ6IN85 833 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 CCDC174Q6PII3 467 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 RBM43Q6ZSC3 357 aaKnown RBP10.02□□□□□ -0.8
UBA3-208ENST00000465627 NEK8Q86SG6 692 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 FMR1NBQ8N0W7 255 aaPredicted RBP10.02□□□□□ -0.8
UBA3-208ENST00000465627 CLIC6Q96NY7 704 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 MTMR9Q96QG7 549 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 ANO3Q9BYT9 981 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 TMOD4Q9NZQ9 345 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 COL20A1Q9P218 1284 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 PNMA2Q9UL42 364 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 AGTPBP1Q9UPW5 1226 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 MRPL11Q9Y3B7 192 aaKnown RBP10.02□□□□□ -0.8
UBA3-208ENST00000465627 RIPK3Q9Y572 518 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 CACNA1BQ00975 2339 aa10.02□□□□□ -0.8
UBA3-208ENST00000465627 NFIBO00712 420 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 CNMDO75829 334 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 FOSP01100 380 aaPredicted RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 CYP3A4P08684 503 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 CIITAP33076 1130 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 PRPHP41219 470 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 USP11P51784 963 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 TTLL12Q14166 644 aaPredicted RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 MUM1L1Q5H9M0 696 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 CAVIN1Q6NZI2 390 aaKnown RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 MOXD1Q6UVY6 613 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.01□□□□□ -0.81
UBA3-208ENST00000465627 CCAR1Q8IX12 1150 aaKnown RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 TDHQ8IZJ6 230 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 SAMD3Q8N6K7 520 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 FERMT2Q96AC1 680 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 LENG9Q96B70 501 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 SLC10A4Q96EP9 437 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 MAF1Q9H063 256 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 RAVER2Q9HCJ3 691 aaKnown RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 HOXC10Q9NYD6 342 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 CCPG1Q9ULG6 757 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 CEP131Q9UPN4 1083 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 ZDBF2Q9HCK1 2354 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 TESPA1A2RU30 521 aaPredicted RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 LAD1O00515 517 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 SLC37A4O43826 429 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 ZBED4O75132 1171 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 TDP2O95551 362 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 ATP2B1P20020 1258 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 HOXA13P31271 388 aaPredicted RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 MCM7P33993 719 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 NDUFA8P51970 172 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 ZNF445P59923 1031 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 FAM160A1Q05DH4 1040 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 SNAPC2Q13487 334 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 ZSCAN23Q3MJ62 389 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 SPRYD7Q5W111 196 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 USP49Q70CQ1 688 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 FSIP1Q8NA03 581 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 MRPS27Q92552 414 aaKnown RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 SLC4A5Q9BY07 1137 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 ASCC2Q9H1I8 757 aaPredicted RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 KCNMB3Q9NPA1 279 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 DACT1Q9NYF0 836 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 MAP3K20Q9NYL2 800 aaKnown RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 BTBD7Q9P203 1132 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 ZMYND8Q9ULU4 1186 aaPredicted RBP10.01□□□□□ -0.81
UBA3-208ENST00000465627 SLC45A1Q9Y2W3 748 aa10.01□□□□□ -0.81
UBA3-208ENST00000465627 TCF20Q9UGU0 1960 aaKnown RBP10□□□□□ -0.81
UBA3-208ENST00000465627 CFAP54Q96N23 3096 aa10□□□□□ -0.81
UBA3-208ENST00000465627 IGLV3-22A0A075B6J6 115 aa10□□□□□ -0.81
UBA3-208ENST00000465627 A0A1B0GVL5 298 aa10□□□□□ -0.81
UBA3-208ENST00000465627 GCOM1H8Y6P7 765 aaPredicted RBP10□□□□□ -0.81
UBA3-208ENST00000465627 IGF2BP3O00425 579 aaKnown RBP eCLIP10□□□□□ -0.81
UBA3-208ENST00000465627 POLR2MP0CAP2 368 aa10□□□□□ -0.81
UBA3-208ENST00000465627 ZBTB48P10074 688 aaPredicted RBP10□□□□□ -0.81
UBA3-208ENST00000465627 PFKFB1P16118 471 aa10□□□□□ -0.81
UBA3-208ENST00000465627 GCFC2P16383 781 aaKnown RBP10□□□□□ -0.81
UBA3-208ENST00000465627 ARHGAP4P98171 946 aa10□□□□□ -0.81
UBA3-208ENST00000465627 LETM2Q2VYF4 491 aa10□□□□□ -0.81
UBA3-208ENST00000465627 FAM109BQ6ICB4 259 aaPredicted RBP10□□□□□ -0.81
UBA3-208ENST00000465627 FASTKD5Q7L8L6 764 aaKnown RBP10□□□□□ -0.81
UBA3-208ENST00000465627 MB21D1Q8N884 522 aa10□□□□□ -0.81
UBA3-208ENST00000465627 USP38Q8NB14 1042 aa10□□□□□ -0.81
UBA3-208ENST00000465627 SYTL5Q8TDW5 730 aaPredicted RBP10□□□□□ -0.81
UBA3-208ENST00000465627 BRI3BPQ8WY22 251 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms