RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 LENG9Q96B70 501 aa16.69■□□□□ 0.26
HLA-F-223ENST00000465459 WDR11Q9BZH6 1224 aa16.69■□□□□ 0.26
HLA-F-223ENST00000465459 HMX1Q9NP08 348 aaPredicted RBP16.69■□□□□ 0.26
HLA-F-223ENST00000465459 KCNH7Q9NS40 1196 aa16.69■□□□□ 0.26
HLA-F-223ENST00000465459 DDX25Q9UHL0 483 aaKnown RBP16.69■□□□□ 0.26
HLA-F-223ENST00000465459 ZDHHC9Q9Y397 364 aa16.69■□□□□ 0.26
HLA-F-223ENST00000465459 MRVI1Q9Y6F6 885 aa16.69■□□□□ 0.26
HLA-F-223ENST00000465459 TDP2O95551 362 aa16.68■□□□□ 0.26
HLA-F-223ENST00000465459 BMP15O95972 392 aa16.68■□□□□ 0.26
HLA-F-223ENST00000465459 TRIM32Q13049 653 aa16.68■□□□□ 0.26
HLA-F-223ENST00000465459 DUSP28Q4G0W2 176 aa16.68■□□□□ 0.26
HLA-F-223ENST00000465459 PRR16Q569H4 304 aa16.68■□□□□ 0.26
HLA-F-223ENST00000465459 TRPV1Q8NER1 839 aa16.68■□□□□ 0.26
HLA-F-223ENST00000465459 CYP2W1Q8TAV3 490 aa16.68■□□□□ 0.26
HLA-F-223ENST00000465459 FAM20AQ96MK3 541 aa16.68■□□□□ 0.26
HLA-F-223ENST00000465459 CHMP5Q9NZZ3 219 aa16.68■□□□□ 0.26
HLA-F-223ENST00000465459 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
HLA-F-223ENST00000465459 Q9Y3F1 56 aa16.68■□□□□ 0.26
HLA-F-223ENST00000465459 KIAA1217Q5T5P2 1943 aa16.68■□□□□ 0.26
HLA-F-223ENST00000465459 NEMFO60524 1076 aa16.67■□□□□ 0.26
HLA-F-223ENST00000465459 TXNP10599 105 aaKnown RBP16.67■□□□□ 0.26
HLA-F-223ENST00000465459 TNFAIP2Q03169 654 aa16.67■□□□□ 0.26
HLA-F-223ENST00000465459 SEMA3FQ13275 785 aa16.67■□□□□ 0.26
HLA-F-223ENST00000465459 NEDD9Q14511 834 aa16.67■□□□□ 0.26
HLA-F-223ENST00000465459 ZNF333Q96JL9 665 aa16.67■□□□□ 0.26
HLA-F-223ENST00000465459 ZFP91Q96JP5 570 aaPredicted RBP16.67■□□□□ 0.26
HLA-F-223ENST00000465459 ZNF396Q96N95 335 aaPredicted RBP16.67■□□□□ 0.26
HLA-F-223ENST00000465459 MCOLN1Q9GZU1 580 aa16.67■□□□□ 0.26
HLA-F-223ENST00000465459 PDGFCQ9NRA1 345 aa16.67■□□□□ 0.26
HLA-F-223ENST00000465459 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.67■□□□□ 0.26
HLA-F-223ENST00000465459 TBC1D22BQ9NU19 505 aa16.67■□□□□ 0.26
HLA-F-223ENST00000465459 NFASCO94856 1347 aa16.67■□□□□ 0.26
HLA-F-223ENST00000465459 IPO5O00410 1097 aaKnown RBP16.66■□□□□ 0.26
HLA-F-223ENST00000465459 LAD1O00515 517 aa16.66■□□□□ 0.26
HLA-F-223ENST00000465459 DUSP11O75319 330 aaKnown RBP16.66■□□□□ 0.26
HLA-F-223ENST00000465459 BAG4O95429 457 aaKnown RBP16.66■□□□□ 0.26
HLA-F-223ENST00000465459 ARP10275 920 aa16.66■□□□□ 0.26
HLA-F-223ENST00000465459 CAPN2P17655 700 aa16.66■□□□□ 0.26
HLA-F-223ENST00000465459 ATP2B1P20020 1258 aa16.66■□□□□ 0.26
HLA-F-223ENST00000465459 CNGA1P29973 690 aa16.66■□□□□ 0.26
HLA-F-223ENST00000465459 ADCYAP1R1P41586 468 aa16.66■□□□□ 0.26
HLA-F-223ENST00000465459 SLFN12Q8IYM2 578 aa16.66■□□□□ 0.26
HLA-F-223ENST00000465459 RIT2Q99578 217 aa16.66■□□□□ 0.26
HLA-F-223ENST00000465459 AGO4Q9HCK5 861 aaKnown RBP16.66■□□□□ 0.26
HLA-F-223ENST00000465459 KCNMB3Q9NPA1 279 aa16.66■□□□□ 0.26
HLA-F-223ENST00000465459 CEP131Q9UPN4 1083 aa16.66■□□□□ 0.26
HLA-F-223ENST00000465459 MSH4O15457 936 aa16.65■□□□□ 0.26
HLA-F-223ENST00000465459 SLC37A4O43826 429 aa16.65■□□□□ 0.26
HLA-F-223ENST00000465459 RARBP10826 455 aa16.65■□□□□ 0.26
HLA-F-223ENST00000465459 KCNA2P16389 499 aa16.65■□□□□ 0.26
HLA-F-223ENST00000465459 SMPD1P17405 629 aa16.65■□□□□ 0.26
HLA-F-223ENST00000465459 CCND3P30281 292 aaPredicted RBP16.65■□□□□ 0.26
HLA-F-223ENST00000465459 MCM7P33993 719 aa16.65■□□□□ 0.26
HLA-F-223ENST00000465459 ZNF174Q15697 407 aa16.65■□□□□ 0.26
HLA-F-223ENST00000465459 ETNPPLQ8TBG4 499 aa16.65■□□□□ 0.26
HLA-F-223ENST00000465459 SLC5A5Q92911 643 aa16.65■□□□□ 0.26
HLA-F-223ENST00000465459 EMID1Q96A84 441 aaPredicted RBP16.65■□□□□ 0.26
HLA-F-223ENST00000465459 ZNF577Q9BSK1 485 aa16.65■□□□□ 0.26
HLA-F-223ENST00000465459 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.65■□□□□ 0.26
HLA-F-223ENST00000465459 PAK6Q9NQU5 681 aaPredicted RBP16.65■□□□□ 0.26
HLA-F-223ENST00000465459 DDX20Q9UHI6 824 aaKnown RBP16.65■□□□□ 0.26
HLA-F-223ENST00000465459 GNEQ9Y223 722 aaKnown RBP16.65■□□□□ 0.26
HLA-F-223ENST00000465459 PCDHB6Q9Y5E3 794 aa16.65■□□□□ 0.26
HLA-F-223ENST00000465459 MORC2Q9Y6X9 1032 aaPredicted RBP16.65■□□□□ 0.26
HLA-F-223ENST00000465459 WNT7AO00755 349 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 ARIH2O95376 493 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 GH1P01241 217 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 CCL5P13501 91 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 UBA1P22314 1058 aaKnown RBP16.64■□□□□ 0.25
HLA-F-223ENST00000465459 PRPHP41219 470 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 NKX3-2P78367 333 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 LAMC2Q13753 1193 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 CALCRLQ16602 461 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 LY6KQ17RY6 165 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 CELF3Q5SZQ8 465 aaKnown RBP16.64■□□□□ 0.25
HLA-F-223ENST00000465459 FOXD4L5Q5VV16 416 aaPredicted RBP16.64■□□□□ 0.25
HLA-F-223ENST00000465459 METTL7BQ6UX53 244 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 FOXD4L4Q8WXT5 416 aaPredicted RBP16.64■□□□□ 0.25
HLA-F-223ENST00000465459 MTMR9Q96QG7 549 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 SDF4Q9BRK5 362 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 POLR3EQ9NVU0 708 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 CFAP45Q9UL16 551 aa16.64■□□□□ 0.25
HLA-F-223ENST00000465459 HTTP42858 3142 aa16.63■□□□□ 0.25
HLA-F-223ENST00000465459 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.63■□□□□ 0.25
HLA-F-223ENST00000465459 DHX15O43143 795 aaKnown RBP16.63■□□□□ 0.25
HLA-F-223ENST00000465459 MARCH6O60337 910 aa16.63■□□□□ 0.25
HLA-F-223ENST00000465459 ATP9AO75110 1047 aa16.63■□□□□ 0.25
HLA-F-223ENST00000465459 ATP2C1P98194 919 aaPredicted RBP16.63■□□□□ 0.25
HLA-F-223ENST00000465459 SP2Q02086 613 aa16.63■□□□□ 0.25
HLA-F-223ENST00000465459 PTGDRQ13258 359 aa16.63■□□□□ 0.25
HLA-F-223ENST00000465459 ANO1Q5XXA6 986 aa16.63■□□□□ 0.25
HLA-F-223ENST00000465459 ARL6IP4Q66PJ3 421 aaKnown RBP16.63■□□□□ 0.25
HLA-F-223ENST00000465459 FAM173BQ6P4H8 233 aa16.63■□□□□ 0.25
HLA-F-223ENST00000465459 DHX37Q8IY37 1157 aaKnown RBP16.63■□□□□ 0.25
HLA-F-223ENST00000465459 C4orf32Q8N8J7 132 aa16.63■□□□□ 0.25
HLA-F-223ENST00000465459 HAS1Q92839 578 aa16.63■□□□□ 0.25
HLA-F-223ENST00000465459 AP5M1Q9H0R1 490 aa16.63■□□□□ 0.25
HLA-F-223ENST00000465459 RNF208Q9H0X6 261 aa16.63■□□□□ 0.25
HLA-F-223ENST00000465459 UNC93B1Q9H1C4 597 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms