RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 LAMC2Q13753 1193 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 NEDD9Q14511 834 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 KCNA10Q16322 511 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 FSCN1Q16658 493 aaKnown RBP9.42□□□□□ -0.9
PLD3-208ENST00000464586 LY6KQ17RY6 165 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 TMEM63BQ5T3F8 832 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 KRT25Q7Z3Z0 450 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 UBE2Q1Q7Z7E8 422 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 DHX37Q8IY37 1157 aaKnown RBP9.42□□□□□ -0.9
PLD3-208ENST00000464586 GIMAP8Q8ND71 665 aaPredicted RBP9.42□□□□□ -0.9
PLD3-208ENST00000464586 RASGRP4Q8TDF6 673 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 DIS3LQ8TF46 1054 aaKnown RBP9.42□□□□□ -0.9
PLD3-208ENST00000464586 COPS5Q92905 334 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 ZFP91Q96JP5 570 aaPredicted RBP9.42□□□□□ -0.9
PLD3-208ENST00000464586 MXRA8Q9BRK3 442 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 SENP6Q9GZR1 1112 aaPredicted RBP9.42□□□□□ -0.9
PLD3-208ENST00000464586 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 PHF24Q9UPV7 400 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.42□□□□□ -0.9
PLD3-208ENST00000464586 UBIAD1Q9Y5Z9 338 aa9.42□□□□□ -0.9
PLD3-208ENST00000464586 BRCA2P51587 3418 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 CCDC194A0A1B0GVG4 234 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 MYADML2A6NDP7 307 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 M0R2N6 131 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 CTAGE5O15320 804 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 KPNA6O60684 536 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 CABYRO75952 493 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 GGPS1O95749 300 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 ASGR1P07306 291 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 USP11P51784 963 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 ACLYP53396 1101 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 BEX3Q00994 111 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 ARHGAP1Q07960 439 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 MTMR1Q13613 665 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 SAFBQ15424 915 aaKnown RBP eCLIP9.41□□□□□ -0.9
PLD3-208ENST00000464586 CEP55Q53EZ4 464 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 KRT40Q6A162 431 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 CCSAPQ6IQ19 270 aaPredicted RBP9.41□□□□□ -0.9
PLD3-208ENST00000464586 NIPA1Q7RTP0 329 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 EMID1Q96A84 441 aaPredicted RBP9.41□□□□□ -0.9
PLD3-208ENST00000464586 C8orf76Q96K31 380 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 GLT1D1Q96MS3 346 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 SENP7Q9BQF6 1050 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 MLXIPQ9HAP2 919 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 JADE2Q9NQC1 790 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 SMC3Q9UQE7 1217 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 CEP290O15078 2479 aa9.41□□□□□ -0.9
PLD3-208ENST00000464586 A0A1W2PQ45 241 aaPredicted RBP9.4□□□□□ -0.9
PLD3-208ENST00000464586 A0A1W2PQY0 241 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 A6NJR5 290 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 MEIS1O00470 390 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 ADAMTS3O15072 1205 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 MMP1P03956 469 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 ITGB5P18084 799 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 UBA1P22314 1058 aaKnown RBP9.4□□□□□ -0.9
PLD3-208ENST00000464586 CIITAP33076 1130 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 FOSBP53539 338 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 IRX5P78411 483 aaPredicted RBP9.4□□□□□ -0.9
PLD3-208ENST00000464586 SP2Q02086 613 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 SEMA3FQ13275 785 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 CUL4AQ13619 759 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 NONOQ15233 471 aaKnown RBP eCLIP9.4□□□□□ -0.9
PLD3-208ENST00000464586 NPY5RQ15761 445 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 CELF3Q5SZQ8 465 aaKnown RBP9.4□□□□□ -0.9
PLD3-208ENST00000464586 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 SLC39A5Q6ZMH5 540 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 PLA2G4DQ86XP0 818 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 TBCKQ8TEA7 893 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 AFG1LQ8WV93 481 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 CRYGNQ8WXF5 182 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 DPF3Q92784 378 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 SNX21Q969T3 373 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 FERMT2Q96AC1 680 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 VTI1AQ96AJ9 217 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 NAP1L4Q99733 375 aaKnown RBP9.4□□□□□ -0.9
PLD3-208ENST00000464586 STARD7Q9NQZ5 370 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 GJB4Q9NTQ9 266 aa9.4□□□□□ -0.9
PLD3-208ENST00000464586 TNRC18O15417 2968 aaPredicted RBP9.4□□□□□ -0.9
PLD3-208ENST00000464586 ELP1O95163 1332 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 K7ELQ4 463 aaPredicted RBP9.39□□□□□ -0.91
PLD3-208ENST00000464586 NOP56O00567 594 aaKnown RBP9.39□□□□□ -0.91
PLD3-208ENST00000464586 MMP3P08254 477 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 MYL3P08590 195 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 PTGS1P23219 599 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 GJB2P29033 226 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 SETQ01105 290 aaPredicted RBP9.39□□□□□ -0.91
PLD3-208ENST00000464586 DGKDQ16760 1214 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 MOXD1Q6UVY6 613 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 METTL7BQ6UX53 244 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 CXCL17Q6UXB2 119 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 CYFIP1Q7L576 1253 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 HSCBQ8IWL3 235 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 DIS3L2Q8IYB7 885 aaKnown RBP9.39□□□□□ -0.91
PLD3-208ENST00000464586 FBXO18Q8NFZ0 1043 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 PPTC7Q8NI37 304 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 SPATA33Q96N06 139 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 SDF4Q9BRK5 362 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 MTG1Q9BT17 334 aaPredicted RBP9.39□□□□□ -0.91
PLD3-208ENST00000464586 SEZ6LQ9BYH1 1024 aa9.39□□□□□ -0.91
PLD3-208ENST00000464586 KCNH7Q9NS40 1196 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms