RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CCDC13Q8IYE1 715 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 MAGEC3Q8TD91 643 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 RASGRP4Q8TDF6 673 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 P3H4Q92791 437 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 GPKOWQ92917 476 aaPredicted RBP eCLIP8.05□□□□□ -1.122e-6■■■□□ 17.7
USP48-206ENST00000464577 ZKSCAN4Q969J2 545 aaPredicted RBP8.05□□□□□ -1.12
USP48-206ENST00000464577 PSMB7Q99436 277 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 PLIN2Q99541 437 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 ISCUQ9H1K1 167 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 MMRN2Q9H8L6 949 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 KLC4Q9NSK0 619 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 ATP8A2Q9NTI2 1148 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 CEP72Q9P209 647 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 ARPP21Q9UBL0 812 aaPredicted RBP8.05□□□□□ -1.12
USP48-206ENST00000464577 STK17AQ9UEE5 414 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 ABCF2Q9UG63 623 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 TMEM59LQ9UK28 342 aa8.05□□□□□ -1.12
USP48-206ENST00000464577 GOLGA6L7A0A1B0GV03 622 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 C5orf60A6NFR6 353 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 BTNL10A8MVZ5 291 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 STXBP3O00186 592 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 BCL9O00512 1426 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 PAEPP09466 180 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 GFPT1Q06210 699 aaPredicted RBP8.04□□□□□ -1.12
USP48-206ENST00000464577 UBE4AQ14139 1066 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 TXNRD1Q16881 649 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 PARP10Q53GL7 1025 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 WLSQ5T9L3 541 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 RNF187Q5TA31 235 aaPredicted RBP8.04□□□□□ -1.12
USP48-206ENST00000464577 AGBL2Q5U5Z8 902 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 SUSD4Q5VX71 490 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 LRRC55Q6ZSA7 311 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 ARMC9Q7Z3E5 817 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 KRT25Q7Z3Z0 450 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 CADPS2Q86UW7 1296 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 PROM2Q8N271 834 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 IFT81Q8WYA0 676 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 LRRC45Q96CN5 670 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 CYFIP2Q96F07 1278 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 MS4A14Q96JA4 679 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 KRT12Q99456 494 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 ABCA3Q99758 1704 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 CRNKL1Q9BZJ0 848 aaKnown RBP8.04□□□□□ -1.12
USP48-206ENST00000464577 TAF1DQ9H5J8 278 aaPredicted RBP8.04□□□□□ -1.12
USP48-206ENST00000464577 BARHL2Q9NY43 387 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 MCM8Q9UJA3 840 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 PLAAQ9Y263 795 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 NKRFO15226 690 aaKnown RBP eCLIP8.04□□□□□ -1.12
USP48-206ENST00000464577 BUB1O43683 1085 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 PALMO75781 387 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 POTEIP0CG38 1075 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 GUCY2FP51841 1108 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 FAM47AQ5JRC9 791 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 CEP85LQ5SZL2 805 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 SFMBT2Q5VUG0 894 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 RUFY4Q6ZNE9 571 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 CCDC121Q6ZUS5 278 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 CACNA2D4Q7Z3S7 1137 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 MAATS1Q7Z4T9 603 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 USP38Q8NB14 1042 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 CALML4Q96GE6 196 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 SLC4A9Q96Q91 983 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 JPH2Q9BR39 696 aaPredicted RBP8.04□□□□□ -1.12
USP48-206ENST00000464577 LZTS2Q9BRK4 669 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 SLC40A1Q9NP59 571 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 DCP1AQ9NPI6 582 aaPredicted RBP8.04□□□□□ -1.12
USP48-206ENST00000464577 RIC8AQ9NPQ8 531 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 SLC12A6Q9UHW9 1150 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 ATP8B3O60423 1300 aa8.04□□□□□ -1.12
USP48-206ENST00000464577 ESYT3A0FGR9 886 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 GMNCA6NCL1 334 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 ZSCAN5CA6NGD5 496 aaPredicted RBP8.03□□□□□ -1.12
USP48-206ENST00000464577 TSPY2A6NKD2 308 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 E7EVH7 732 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 H0YGN5 161 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 GCOM1H8Y6P7 765 aaPredicted RBP8.03□□□□□ -1.12
USP48-206ENST00000464577 RAD51CO43502 376 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 TRAPPC3O43617 180 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 ADAMTS2O95450 1211 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 MYZAPP0CAP1 466 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 PSEN1P49768 467 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 CDR1P51861 262 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 SEC24CP53992 1094 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 IFT88Q13099 833 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 PSMD2Q13200 908 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 MTMR3Q13615 1198 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 NONOQ15233 471 aaKnown RBP eCLIP8.03□□□□□ -1.12
USP48-206ENST00000464577 LACTB2Q53H82 288 aaPredicted RBP8.03□□□□□ -1.12
USP48-206ENST00000464577 SV2BQ7L1I2 683 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 ANKRD13CQ8N6S4 541 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 GIMAP7Q8NHV1 300 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 ZNF384Q8TF68 577 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 EEF2KMTQ96G04 330 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 CALR3Q96L12 384 aaKnown RBP8.03□□□□□ -1.12
USP48-206ENST00000464577 TSG101Q99816 390 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 MMTAG2Q9BU76 263 aaKnown RBP8.03□□□□□ -1.12
USP48-206ENST00000464577 ATP6V0A2Q9Y487 856 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 CEP83Q9Y592 693 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 NFS1Q9Y697 457 aa8.03□□□□□ -1.12
USP48-206ENST00000464577 TLR2O60603 784 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms