RNA–Protein interactions for RNA: ENST00000464363.5

NELFCD-202, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-202ENST00000464363 PIK3CDO00329 1044 aa20.25■□□□□ 0.83
NELFCD-202ENST00000464363 F2P00734 622 aa20.25■□□□□ 0.83
NELFCD-202ENST00000464363 ZNF286BP0CG31 522 aa20.25■□□□□ 0.83
NELFCD-202ENST00000464363 ATP2A2P16615 1042 aaKnown RBP20.25■□□□□ 0.83
NELFCD-202ENST00000464363 UBA1P22314 1058 aaKnown RBP20.25■□□□□ 0.83
NELFCD-202ENST00000464363 HSDL1Q3SXM5 330 aa20.25■□□□□ 0.83
NELFCD-202ENST00000464363 XRRA1Q6P2D8 792 aa20.25■□□□□ 0.83
NELFCD-202ENST00000464363 SRBD1Q8N5C6 995 aaKnown RBP20.25■□□□□ 0.83
NELFCD-202ENST00000464363 FANCBQ8NB91 859 aa20.25■□□□□ 0.83
NELFCD-202ENST00000464363 AFAP1L1Q8TED9 768 aa20.25■□□□□ 0.83
NELFCD-202ENST00000464363 ZFP91Q96JP5 570 aaPredicted RBP20.25■□□□□ 0.83
NELFCD-202ENST00000464363 NEK1Q96PY6 1258 aa20.25■□□□□ 0.83
NELFCD-202ENST00000464363 GAS2L1Q99501 681 aaPredicted RBP20.25■□□□□ 0.83
NELFCD-202ENST00000464363 HDAC6Q9UBN7 1215 aa20.25■□□□□ 0.83
NELFCD-202ENST00000464363 SORBS3O60504 671 aa20.24■□□□□ 0.83
NELFCD-202ENST00000464363 CDC45O75419 566 aa20.24■□□□□ 0.83
NELFCD-202ENST00000464363 PLEKHA8P1O95397 391 aa20.24■□□□□ 0.83
NELFCD-202ENST00000464363 PARNO95453 639 aaKnown RBP20.24■□□□□ 0.83
NELFCD-202ENST00000464363 HOXD8P13378 290 aaPredicted RBP20.24■□□□□ 0.83
NELFCD-202ENST00000464363 RXRAP19793 462 aa20.24■□□□□ 0.83
NELFCD-202ENST00000464363 SP2Q02086 613 aa20.24■□□□□ 0.83
NELFCD-202ENST00000464363 NEDD9Q14511 834 aa20.24■□□□□ 0.83
NELFCD-202ENST00000464363 USP17L6PQ6QN14 398 aa20.24■□□□□ 0.83
NELFCD-202ENST00000464363 CMTR1Q8N1G2 835 aaKnown RBP20.24■□□□□ 0.83
NELFCD-202ENST00000464363 VWCEQ96DN2 955 aa20.24■□□□□ 0.83
NELFCD-202ENST00000464363 INPP4AQ96PE3 977 aaPredicted RBP20.24■□□□□ 0.83
NELFCD-202ENST00000464363 LRRC2Q9BYS8 371 aa20.24■□□□□ 0.83
NELFCD-202ENST00000464363 PSTPIP2Q9H939 334 aa20.24■□□□□ 0.83
NELFCD-202ENST00000464363 FRMPD4Q14CM0 1322 aa20.24■□□□□ 0.83
NELFCD-202ENST00000464363 A0A0C4DFX4 3053 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 SPATA31C2B4DYI2 1134 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 HAS3O00219 553 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 NOP56O00567 594 aaKnown RBP20.23■□□□□ 0.83
NELFCD-202ENST00000464363 FIBPO43427 364 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 SELPP16109 830 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 ICAM3P32942 547 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 MRPS9P82933 396 aaKnown RBP20.23■□□□□ 0.83
NELFCD-202ENST00000464363 KRT32Q14532 448 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 PCNX4Q63HM2 1172 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 SGMS1Q86VZ5 419 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 SKAP1Q86WV1 359 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 CCDC82Q8N4S0 544 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 RTEL1Q9NZ71 1219 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 PCDHA11Q9Y5I1 949 aa20.23■□□□□ 0.83
NELFCD-202ENST00000464363 MEIS2O14770 477 aa20.22■□□□□ 0.83
NELFCD-202ENST00000464363 PTK7Q13308 1070 aa20.22■□□□□ 0.83
NELFCD-202ENST00000464363 NLRX1Q86UT6 975 aa20.22■□□□□ 0.83
NELFCD-202ENST00000464363 MICU3Q86XE3 530 aa20.22■□□□□ 0.83
NELFCD-202ENST00000464363 PHOSPHO2Q8TCD6 241 aa20.22■□□□□ 0.83
NELFCD-202ENST00000464363 GPKOWQ92917 476 aaPredicted RBP eCLIP20.22■□□□□ 0.83
NELFCD-202ENST00000464363 USP26Q9BXU7 913 aa20.22■□□□□ 0.83
NELFCD-202ENST00000464363 NKX2-4Q9H2Z4 354 aa20.22■□□□□ 0.83
NELFCD-202ENST00000464363 BAIAP3O94812 1187 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 RABGGTBP53611 331 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 COL9A3Q14050 684 aaPredicted RBP20.21■□□□□ 0.83
NELFCD-202ENST00000464363 TSGA10IPQ3SY00 556 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 METTL7BQ6UX53 244 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 TMTC3Q6ZXV5 915 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 LRRC8DQ7L1W4 858 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 DHX32Q7L7V1 743 aaKnown RBP20.21■□□□□ 0.83
NELFCD-202ENST00000464363 RAB11FIP4Q86YS3 637 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 CCDC136Q96JN2 1154 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 CTAGE1Q96RT6 745 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 SLC9A7Q96T83 725 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 PRDM12Q9H4Q4 367 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 RBM28Q9NW13 759 aaKnown RBP20.21■□□□□ 0.83
NELFCD-202ENST00000464363 YBX2Q9Y2T7 364 aaKnown RBP20.21■□□□□ 0.83
NELFCD-202ENST00000464363 CDH23Q9H251 3354 aa20.21■□□□□ 0.83
NELFCD-202ENST00000464363 MYH7BA7E2Y1 1941 aa20.2■□□□□ 0.82
NELFCD-202ENST00000464363 H3BRB1 525 aa20.2■□□□□ 0.82
NELFCD-202ENST00000464363 HMGB1P09429 215 aaKnown RBP20.2■□□□□ 0.82
NELFCD-202ENST00000464363 CKBP12277 381 aa20.2■□□□□ 0.82
NELFCD-202ENST00000464363 RBL2Q08999 1139 aa20.2■□□□□ 0.82
NELFCD-202ENST00000464363 PPP2R2DQ66LE6 453 aa20.2■□□□□ 0.82
NELFCD-202ENST00000464363 CYFIP1Q7L576 1253 aa20.2■□□□□ 0.82
NELFCD-202ENST00000464363 GIMAP8Q8ND71 665 aaPredicted RBP20.2■□□□□ 0.82
NELFCD-202ENST00000464363 CDHR1Q96JP9 859 aa20.2■□□□□ 0.82
NELFCD-202ENST00000464363 SENP7Q9BQF6 1050 aa20.2■□□□□ 0.82
NELFCD-202ENST00000464363 C16orf70Q9BSU1 422 aa20.2■□□□□ 0.82
NELFCD-202ENST00000464363 TUT1Q9H6E5 874 aaKnown RBP20.2■□□□□ 0.82
NELFCD-202ENST00000464363 hCG_1642624A0A1W2PR95 340 aa20.19■□□□□ 0.82
NELFCD-202ENST00000464363 SPDYE3A6NKU9 549 aa20.19■□□□□ 0.82
NELFCD-202ENST00000464363 KIF28PB7ZC32 967 aa20.19■□□□□ 0.82
NELFCD-202ENST00000464363 KCNJ6P48051 423 aa20.19■□□□□ 0.82
NELFCD-202ENST00000464363 EXOSC10Q01780 885 aaKnown RBP20.19■□□□□ 0.82
NELFCD-202ENST00000464363 APOA5Q6Q788 366 aa20.19■□□□□ 0.82
NELFCD-202ENST00000464363 HEATR3Q7Z4Q2 680 aa20.19■□□□□ 0.82
NELFCD-202ENST00000464363 DHX38Q92620 1227 aaKnown RBP20.19■□□□□ 0.82
NELFCD-202ENST00000464363 C17orf102A2RUQ5 167 aa20.18■□□□□ 0.82
NELFCD-202ENST00000464363 ZBTB43O43298 467 aa20.18■□□□□ 0.82
NELFCD-202ENST00000464363 LGALS2P05162 132 aa20.18■□□□□ 0.82
NELFCD-202ENST00000464363 FGD1P98174 961 aa20.18■□□□□ 0.82
NELFCD-202ENST00000464363 EHMT1Q9H9B1 1298 aa20.18■□□□□ 0.82
NELFCD-202ENST00000464363 ZNF215Q9UL58 517 aaPredicted RBP20.18■□□□□ 0.82
NELFCD-202ENST00000464363 GNAT1P11488 350 aa20.17■□□□□ 0.82
NELFCD-202ENST00000464363 MYOGP15173 224 aa20.17■□□□□ 0.82
NELFCD-202ENST00000464363 IGFBP4P22692 258 aa20.17■□□□□ 0.82
NELFCD-202ENST00000464363 ZNF200P98182 395 aaPredicted RBP20.17■□□□□ 0.82
NELFCD-202ENST00000464363 RTN1Q16799 776 aa20.17■□□□□ 0.82
NELFCD-202ENST00000464363 CNKSR3Q6P9H4 555 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms