RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 CCDC12Q8WUD4 166 aaPredicted RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 ZNF274Q96GC6 653 aaPredicted RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 CDHR1Q96JP9 859 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 INPP4AQ96PE3 977 aaPredicted RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 MTG1Q9BT17 334 aaPredicted RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 ALDH8A1Q9H2A2 487 aaPredicted RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 RIC8AQ9NPQ8 531 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 V9GY48 417 aaPredicted RBP8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 MYH6P13533 1939 aa8.54□□□□□ -1.04
THUMPD3-208ENST00000464045 CDH23Q9H251 3354 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 hCG_1642624A0A1W2PR95 340 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 ESYT2A0FGR8 921 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 TRIM43BA6NCK2 446 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 SPDYE3A6NKU9 549 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 SPATA31C2B4DYI2 1134 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 STXBP3O00186 592 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 PRPF3O43395 683 aaKnown RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 FIBPO43427 364 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 RGS20O76081 388 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 FOSP01100 380 aaPredicted RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 CD4P01730 458 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 SUPT20HL2P0C7V6 817 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 HOXD8P13378 290 aaPredicted RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 SCG2P13521 617 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 IFNAR1P17181 557 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 PTGS1P23219 599 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 ADCY7P51828 1080 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 NAPAP54920 295 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 MRPS9P82933 396 aaKnown RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 AKAP17AQ02040 695 aaKnown RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 PTPN11Q06124 597 aaPredicted RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 FAAP100Q0VG06 881 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 AP3B2Q13367 1082 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 NEDD9Q14511 834 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 ANKRD1Q15327 319 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 DGKDQ16760 1214 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 CELF3Q5SZQ8 465 aaKnown RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 NFRKBQ6P4R8 1299 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 DHX37Q8IY37 1157 aaKnown RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 FAM177A1Q8N128 213 aaPredicted RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 GIMAP8Q8ND71 665 aaPredicted RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 IL31RAQ8NI17 732 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 COPS5Q92905 334 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 GPKOWQ92917 476 aaPredicted RBP eCLIP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 TRIM43Q96BQ3 446 aaPredicted RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 SENP7Q9BQF6 1050 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 RNF26Q9BY78 433 aaPredicted RBP8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 PDRG1Q9NUG6 133 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 TMEM39AQ9NV64 488 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 TBX21Q9UL17 535 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 STXBP5LQ9Y2K9 1186 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 GRIN2DO15399 1336 aa8.53□□□□□ -1.04
THUMPD3-208ENST00000464045 BAZ2BQ9UIF8 2168 aaKnown RBP8.52□□□□□ -1.04
THUMPD3-208ENST00000464045 SMCO2A6NFE2 343 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 MAFGO15525 162 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 PPFIA4O75335 1185 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 TIMP1P01033 207 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 MMP3P08254 477 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 MYL3P08590 195 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 RAG1P15918 1043 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 UBA1P22314 1058 aaKnown RBP8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 NTRK3Q16288 839 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 C9orf50Q5SZB4 431 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 CPLX2Q6PUV4 134 aaKnown RBP8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 SH3RF1Q7Z6J0 888 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 NLRX1Q86UT6 975 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 SESTD1Q86VW0 696 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 TRIM22Q8IYM9 498 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 AFG1LQ8WV93 481 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 GPRASP2Q96D09 838 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 GUCD1Q96NT3 240 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 KATNAL1Q9BW62 490 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 UPF3BQ9BZI7 483 aaKnown RBP8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 ZMYND12Q9H0C1 365 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 PCDHA6Q9UN73 950 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 PCDHA8Q9Y5H6 950 aa8.52□□□□□ -1.05
THUMPD3-208ENST00000464045 CPLX1O14810 134 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 CDKL5O76039 1030 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 GGPS1O95749 300 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 GNA11P29992 359 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 CLK2P49760 499 aaKnown RBP8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 PSMC6P62333 389 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 SHHQ15465 462 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 PKN1Q16512 942 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 UBE2SQ16763 222 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 NBPF20Q3BBV1 942 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 TYW1BQ6NUM6 668 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 METTL7BQ6UX53 244 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 CCDC148Q8NFR7 591 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 BICD2Q8TD16 824 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 BADQ92934 168 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 SPATA33Q96N06 139 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 MLXIPQ9HAP2 919 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 C6orf50Q9HD87 102 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 SH3GLB2Q9NR46 395 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 UBIAD1Q9Y5Z9 338 aa8.51□□□□□ -1.05
THUMPD3-208ENST00000464045 NOP56O00567 594 aaKnown RBP8.5□□□□□ -1.05
THUMPD3-208ENST00000464045 B4GALT4O60513 344 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms