RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 C8orf76Q96K31 380 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 TESK2Q96S53 571 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 CDC5LQ99459 802 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 DUSP9Q99956 384 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ZWILCHQ9H900 591 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ACTR5Q9H9F9 607 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 EBF2Q9HAK2 575 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 FANCLQ9NW38 375 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 WDR35Q9P2L0 1181 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 CDC23Q9UJX2 597 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 CTDP1Q9Y5B0 961 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 KDRP35968 1356 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ANKRD31Q8N7Z5 1873 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ATXN2Q99700 1313 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 A0A0U1RQJ8 604 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 AGPSO00116 658 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 STXBP3O00186 592 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ELL2O00472 640 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 SLC27A2O14975 620 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ZBTB7BO15156 539 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 LUC7L3O95232 432 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ABL1P00519 1130 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 NBPF7P0C2Y1 421 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ATP1A3P13637 1013 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 LSP1P33241 339 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 PCK1P35558 622 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ADKP55263 362 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ELF3P78545 371 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 DYNC1I2Q13409 638 aaKnown RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 RUFY3Q7L099 469 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 TBC1D1Q86TI0 1168 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 NLRP14Q86W24 1093 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 CNBD1Q8NA66 436 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 AGAP11Q8TF27 550 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 EVI5LQ96CN4 794 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 PGBD1Q96JS3 809 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 AGAP3Q96P47 875 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 CCT8L2Q96SF2 557 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 ESYT1Q9BSJ8 1104 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 SELENOOQ9BVL4 669 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 PPP1R12CQ9BZL4 782 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 SCAND2PQ9GZW5 306 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 TAOK3Q9H2K8 898 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 VIPAS39Q9H9C1 493 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 TUBGCP4Q9UGJ1 667 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 FBXO9Q9UK97 447 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-205ENST00000463753 LIMCH1Q9UPQ0 1083 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 SLX4Q8IY92 1834 aa3.99□□□□□ -1.77
COL8A1-205ENST00000463753 NUP155O75694 1391 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 CTAGE9A4FU28 777 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ARHGAP6O43182 974 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 FOXO3O43524 673 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 PFKFB2O60825 505 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 DGAT1O75907 488 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 FBXO45P0C2W1 286 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 HPDP32754 393 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 STAT6P42226 847 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 KCNJ6P48051 423 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 UBASH3AP57075 661 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 FANCCQ00597 558 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 MTX1Q13505 466 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 MTF1Q14872 753 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 CDC37Q16543 378 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 TSNAXIP1Q2TAA8 658 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ERFEQ4G0M1 354 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ANKRD20A8PQ5CZ79 823 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 LMBRD2Q68DH5 695 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 PI16Q6UXB8 463 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 BICDL1Q6ZP65 573 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 SND1Q7KZF4 910 aaKnown RBP eCLIP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 YTHDF3Q7Z739 585 aaKnown RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 LCA5Q86VQ0 697 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 LONP2Q86WA8 852 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 COL23A1Q86Y22 540 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 STAG2Q8N3U4 1231 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC155Q8N6L0 562 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 KCNN1Q92952 543 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 SLC35B4Q969S0 331 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ARL8AQ96BM9 186 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 RRP36Q96EU6 259 aaKnown RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 POM121Q96HA1 1249 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 CAPZA3Q96KX2 299 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 SPATA17Q96L03 361 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 MRGPRX2Q96LB1 330 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 FGD4Q96M96 766 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 NDNQ99608 321 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 SDF4Q9BRK5 362 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ARHGAP9Q9BRR9 750 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 EPN3Q9H201 632 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 MRPL44Q9H9J2 332 aaKnown RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ABCF3Q9NUQ8 709 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 SLC5A4Q9NY91 659 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 PHF24Q9UPV7 400 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 CHMP2BQ9UQN3 213 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 TRIM43BA6NCK2 446 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 A6NHS1 94 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 TMEM232C9JQI7 657 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 HNRNPRO43390 633 aaKnown RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 MGRN1O60291 552 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ZC3H6P61129 1189 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms