RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ESR2Q92731 530 aa16.91■□□□□ 0.3
SMC1A-204ENST00000463684 WNT8BQ93098 351 aa16.91■□□□□ 0.3
SMC1A-204ENST00000463684 PABPC5Q96DU9 382 aaKnown RBP16.91■□□□□ 0.3
SMC1A-204ENST00000463684 UPF3BQ9BZI7 483 aaKnown RBP16.91■□□□□ 0.3
SMC1A-204ENST00000463684 RNF41Q9H4P4 317 aaPredicted RBP16.91■□□□□ 0.3
SMC1A-204ENST00000463684 COL20A1Q9P218 1284 aa16.91■□□□□ 0.3
SMC1A-204ENST00000463684 PRKAG3Q9UGI9 489 aa16.91■□□□□ 0.3
SMC1A-204ENST00000463684 PTPRSQ13332 1948 aa16.9■□□□□ 0.3
SMC1A-204ENST00000463684 TRIP12Q14669 1992 aaPredicted RBP16.9■□□□□ 0.3
SMC1A-204ENST00000463684 POTEB3A0JP26 581 aa16.9■□□□□ 0.3
SMC1A-204ENST00000463684 DHX16O60231 1041 aaKnown RBP16.9■□□□□ 0.3
SMC1A-204ENST00000463684 NR3C2P08235 984 aa16.9■□□□□ 0.3
SMC1A-204ENST00000463684 HSPD1P10809 573 aaKnown RBP16.9■□□□□ 0.3
SMC1A-204ENST00000463684 CCDC178Q5BJE1 867 aa16.9■□□□□ 0.3
SMC1A-204ENST00000463684 KCNV1Q6PIU1 500 aa16.9■□□□□ 0.3
SMC1A-204ENST00000463684 POTEBQ6S5H4 581 aa16.9■□□□□ 0.3
SMC1A-204ENST00000463684 FBXO11Q86XK2 927 aa16.9■□□□□ 0.3
SMC1A-204ENST00000463684 DGKHQ86XP1 1220 aa16.9■□□□□ 0.3
SMC1A-204ENST00000463684 ADGRF4Q8IZF3 695 aa16.9■□□□□ 0.3
SMC1A-204ENST00000463684 ZKSCAN3Q9BRR0 538 aa16.9■□□□□ 0.3
SMC1A-204ENST00000463684 NCK2O43639 380 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 UPP2O95045 317 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 CFBP00751 764 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 NHLH1Q02575 133 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 PLEKHG4Q58EX7 1191 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 TCEAL5Q5H9L2 206 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 SERINC5Q86VE9 423 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 TMEM192Q8IY95 271 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 PNMA1Q8ND90 353 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 SEPT8Q92599 483 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 TOP1MTQ969P6 601 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 FAM227BQ96M60 508 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 FBXL18Q96ME1 805 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 SPATA33Q96N06 139 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 NSUN3Q9H649 340 aaKnown RBP16.89■□□□□ 0.29
SMC1A-204ENST00000463684 KAT14Q9H8E8 782 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 PXMP2Q9NR77 195 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 ZMYM6O95789 1325 aa16.89■□□□□ 0.29
SMC1A-204ENST00000463684 C17orf102A2RUQ5 167 aa16.88■□□□□ 0.29
SMC1A-204ENST00000463684 MYCLP12524 364 aaPredicted RBP16.88■□□□□ 0.29
SMC1A-204ENST00000463684 ZP2Q05996 745 aa16.88■□□□□ 0.29
SMC1A-204ENST00000463684 QRICH1Q2TAL8 776 aa16.88■□□□□ 0.29
SMC1A-204ENST00000463684 CELF3Q5SZQ8 465 aaKnown RBP16.88■□□□□ 0.29
SMC1A-204ENST00000463684 MYSM1Q5VVJ2 828 aa16.88■□□□□ 0.29
SMC1A-204ENST00000463684 IQCA1Q86XH1 822 aa16.88■□□□□ 0.29
SMC1A-204ENST00000463684 ADHFE1Q8IWW8 467 aa16.88■□□□□ 0.29
SMC1A-204ENST00000463684 ATP6V0A1Q93050 837 aa16.88■□□□□ 0.29
SMC1A-204ENST00000463684 VAT1LQ9HCJ6 419 aa16.88■□□□□ 0.29
SMC1A-204ENST00000463684 CLDND1Q9NY35 253 aa16.88■□□□□ 0.29
SMC1A-204ENST00000463684 A0A0D9SFI3 127 aa16.87■□□□□ 0.29
SMC1A-204ENST00000463684 SORBS3O60504 671 aa16.87■□□□□ 0.29
SMC1A-204ENST00000463684 HOXD8P13378 290 aaPredicted RBP16.87■□□□□ 0.29
SMC1A-204ENST00000463684 MKRN4PQ13434 485 aaPredicted RBP16.87■□□□□ 0.29
SMC1A-204ENST00000463684 HIC1Q14526 733 aa16.87■□□□□ 0.29
SMC1A-204ENST00000463684 HSDL1Q3SXM5 330 aa16.87■□□□□ 0.29
SMC1A-204ENST00000463684 ASPRV1Q53RT3 343 aa16.87■□□□□ 0.29
SMC1A-204ENST00000463684 TICAM2Q86XR7 235 aa16.87■□□□□ 0.29
SMC1A-204ENST00000463684 MFSD14AQ96MC6 490 aa16.87■□□□□ 0.29
SMC1A-204ENST00000463684 MUC6Q6W4X9 2439 aa16.87■□□□□ 0.29
SMC1A-204ENST00000463684 SIP14410 1827 aa16.86■□□□□ 0.29
SMC1A-204ENST00000463684 C19orf67A6NJJ6 358 aa16.86■□□□□ 0.29
SMC1A-204ENST00000463684 GGPS1O95749 300 aa16.86■□□□□ 0.29
SMC1A-204ENST00000463684 NT5C2P49902 561 aa16.86■□□□□ 0.29
SMC1A-204ENST00000463684 TBC1D10CQ8IV04 446 aa16.86■□□□□ 0.29
SMC1A-204ENST00000463684 IFIH1Q9BYX4 1025 aaKnown RBP16.86■□□□□ 0.29
SMC1A-204ENST00000463684 MLXIPQ9HAP2 919 aa16.86■□□□□ 0.29
SMC1A-204ENST00000463684 MAP3K20Q9NYL2 800 aaKnown RBP16.86■□□□□ 0.29
SMC1A-204ENST00000463684 PCDHB15Q9Y5E8 787 aa16.86■□□□□ 0.29
SMC1A-204ENST00000463684 PIEZO1Q92508 2521 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 H3BRB1 525 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 RBAK-RBAKDNI3L0D1 243 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 ZNF213O14771 459 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 CAND2O75155 1236 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 PARP1P09874 1014 aaKnown RBP16.85■□□□□ 0.29
SMC1A-204ENST00000463684 TGFB3P10600 412 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 HSD17B4P51659 736 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 MFAP1P55081 439 aaKnown RBP16.85■□□□□ 0.29
SMC1A-204ENST00000463684 COL19A1Q14993 1142 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 ANKRD45Q5TZF3 282 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
SMC1A-204ENST00000463684 POP1Q99575 1024 aaKnown RBP16.85■□□□□ 0.29
SMC1A-204ENST00000463684 PDCD2LQ9BRP1 358 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 C16orf70Q9BSU1 422 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 AMNQ9BXJ7 453 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 TUT1Q9H6E5 874 aaKnown RBP16.85■□□□□ 0.29
SMC1A-204ENST00000463684 JMJD4Q9H9V9 463 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 SALL3Q9BXA9 1300 aa16.85■□□□□ 0.29
SMC1A-204ENST00000463684 TREHO43280 583 aa16.84■□□□□ 0.29
SMC1A-204ENST00000463684 RGS20O76081 388 aa16.84■□□□□ 0.29
SMC1A-204ENST00000463684 SMIM10L2AP0DMW4 78 aa16.84■□□□□ 0.29
SMC1A-204ENST00000463684 SMIM10L2BP0DMW5 78 aa16.84■□□□□ 0.29
SMC1A-204ENST00000463684 GNAT1P11488 350 aa16.84■□□□□ 0.29
SMC1A-204ENST00000463684 IRS1P35568 1242 aa16.84■□□□□ 0.29
SMC1A-204ENST00000463684 NMIQ13287 307 aaPredicted RBP16.84■□□□□ 0.29
SMC1A-204ENST00000463684 STOX1Q6ZVD7 989 aa16.84■□□□□ 0.29
SMC1A-204ENST00000463684 HFE2Q6ZVN8 426 aa16.84■□□□□ 0.29
SMC1A-204ENST00000463684 RPAINQ86UA6 219 aa16.84■□□□□ 0.29
SMC1A-204ENST00000463684 VSIG10LQ86VR7 867 aa16.84■□□□□ 0.29
SMC1A-204ENST00000463684 FIBCD1Q8N539 461 aa16.84■□□□□ 0.29
SMC1A-204ENST00000463684 APBB2Q92870 758 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms