RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 MFSD14AQ96MC6 490 aa13.04□□□□□ -0.32
SSR3-202ENST00000463503 FRYLO94915 3013 aa13.04□□□□□ -0.32
SSR3-202ENST00000463503 GVINP1Q7Z2Y8 2422 aa13.03□□□□□ -0.32
SSR3-202ENST00000463503 EFCAB14O75071 495 aa13.03□□□□□ -0.32
SSR3-202ENST00000463503 REC8O95072 547 aa13.03□□□□□ -0.32
SSR3-202ENST00000463503 SMAD2Q15796 467 aaKnown RBP13.03□□□□□ -0.32
SSR3-202ENST00000463503 RCSD1Q6JBY9 416 aa13.03□□□□□ -0.32
SSR3-202ENST00000463503 IFNL3Q8IZI9 196 aa13.03□□□□□ -0.32
SSR3-202ENST00000463503 CLEC4DQ8WXI8 215 aa13.03□□□□□ -0.32
SSR3-202ENST00000463503 MAP4K1Q92918 833 aa13.03□□□□□ -0.32
SSR3-202ENST00000463503 NACAP1Q9BZK3 213 aa13.03□□□□□ -0.32
SSR3-202ENST00000463503 LSG1Q9H089 658 aaKnown RBP13.03□□□□□ -0.32
SSR3-202ENST00000463503 ZNF287Q9HBT7 754 aa13.03□□□□□ -0.32
SSR3-202ENST00000463503 GTF2IRD1Q9UHL9 959 aa13.03□□□□□ -0.32
SSR3-202ENST00000463503 INSL6Q9Y581 213 aa13.03□□□□□ -0.32
SSR3-202ENST00000463503 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 H3BNC9 293 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 NMT2O60551 498 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 TDO2P48775 406 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 PTPN5P54829 565 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 TFAP4Q01664 338 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 ARHGAP1Q07960 439 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 IKBKEQ14164 716 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 PTPROQ16827 1216 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 CTC1Q2NKJ3 1217 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 CCDC62Q6P9F0 684 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 AFG1LQ8WV93 481 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 NSUN3Q9H649 340 aaKnown RBP13.02□□□□□ -0.33
SSR3-202ENST00000463503 IL17RBQ9NRM6 502 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 CTNNA3Q9UI47 895 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 FAM50BQ9Y247 325 aa13.02□□□□□ -0.33
SSR3-202ENST00000463503 KAT6AQ92794 2004 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 PTPRZ1P23471 2315 aaPredicted RBP13.01□□□□□ -0.33
SSR3-202ENST00000463503 FGAP02671 866 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 TXNP10599 105 aaKnown RBP13.01□□□□□ -0.33
SSR3-202ENST00000463503 CALML3P27482 149 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 NOVP48745 357 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 NT5C2P49902 561 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 CHMP4BP1P59074 171 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 DLX2Q07687 328 aaPredicted RBP13.01□□□□□ -0.33
SSR3-202ENST00000463503 PDE4DQ08499 809 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 ZNF618Q5T7W0 954 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 VPS53Q5VIR6 699 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 TTBK2Q6IQ55 1244 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 BTNL9Q6UXG8 535 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 BMP8AQ7Z5Y6 402 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 RPAINQ86UA6 219 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 RNF135Q8IUD6 432 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 EDAQ92838 391 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 SAMD11Q96NU1 681 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 UPF3BQ9BZI7 483 aaKnown RBP13.01□□□□□ -0.33
SSR3-202ENST00000463503 CLDND1Q9NY35 253 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 ANAPC4Q9UJX5 808 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 STX8Q9UNK0 236 aa13.01□□□□□ -0.33
SSR3-202ENST00000463503 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
SSR3-202ENST00000463503 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
SSR3-202ENST00000463503 TTC3P53804 2025 aa13□□□□□ -0.33
SSR3-202ENST00000463503 MBTPS2O43462 519 aa13□□□□□ -0.33
SSR3-202ENST00000463503 TBX10O75333 385 aa13□□□□□ -0.33
SSR3-202ENST00000463503 LGR5O75473 907 aa13□□□□□ -0.33
SSR3-202ENST00000463503 F2P00734 622 aa13□□□□□ -0.33
SSR3-202ENST00000463503 LINC00271P0C7V0 271 aa13□□□□□ -0.33
SSR3-202ENST00000463503 SLC16A2P36021 539 aa13□□□□□ -0.33
SSR3-202ENST00000463503 RPS6P62753 249 aaKnown RBP13□□□□□ -0.33
SSR3-202ENST00000463503 GPM6BQ13491 265 aa13□□□□□ -0.33
SSR3-202ENST00000463503 HIC1Q14526 733 aa13□□□□□ -0.33
SSR3-202ENST00000463503 RNF207Q6ZRF8 634 aa13□□□□□ -0.33
SSR3-202ENST00000463503 FBXO11Q86XK2 927 aa13□□□□□ -0.33
SSR3-202ENST00000463503 MYOCDQ8IZQ8 938 aa13□□□□□ -0.33
SSR3-202ENST00000463503 POP1Q99575 1024 aaKnown RBP13□□□□□ -0.33
SSR3-202ENST00000463503 NAPBQ9H115 298 aa13□□□□□ -0.33
SSR3-202ENST00000463503 HDAC6Q9UBN7 1215 aa13□□□□□ -0.33
SSR3-202ENST00000463503 HAS3O00219 553 aa12.99□□□□□ -0.33
SSR3-202ENST00000463503 AMHP03971 560 aa12.99□□□□□ -0.33
SSR3-202ENST00000463503 PCP11498 1178 aaKnown RBP12.99□□□□□ -0.33
SSR3-202ENST00000463503 PTH1RQ03431 593 aa12.99□□□□□ -0.33
SSR3-202ENST00000463503 PDE4BQ07343 736 aa12.99□□□□□ -0.33
SSR3-202ENST00000463503 PPARAQ07869 468 aa12.99□□□□□ -0.33
SSR3-202ENST00000463503 PTK7Q13308 1070 aa12.99□□□□□ -0.33
SSR3-202ENST00000463503 CLUL1Q15846 466 aa12.99□□□□□ -0.33
SSR3-202ENST00000463503 DNERQ8NFT8 737 aa12.99□□□□□ -0.33
SSR3-202ENST00000463503 DCAF4Q8WV16 495 aa12.99□□□□□ -0.33
SSR3-202ENST00000463503 KCNB2Q92953 911 aa12.99□□□□□ -0.33
SSR3-202ENST00000463503 EMSYQ7Z589 1322 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 TMEM221A6NGB7 291 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 M0R296 226 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 GFRA3O60609 400 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 APPP05067 770 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 FGRP09769 529 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 ZNF286BP0CG31 522 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 HYAL1Q12794 435 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 SMAD4Q13485 552 aaKnown RBP12.98□□□□□ -0.33
SSR3-202ENST00000463503 NECTIN1Q15223 517 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 CCDC96Q2M329 555 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 TSGA10IPQ3SY00 556 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 PLEKHG4Q58EX7 1191 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 SYDE2Q5VT97 1194 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 TRIM67Q6ZTA4 783 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 EP400NLQ6ZTU2 488 aa12.98□□□□□ -0.33
SSR3-202ENST00000463503 TMEM192Q8IY95 271 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms