RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 GJB4Q9NTQ9 266 aa8.36□□□□□ -1.07
EPHA4-210ENST00000463446 UBIAD1Q9Y5Z9 338 aa8.36□□□□□ -1.07
EPHA4-210ENST00000463446 NFASCO94856 1347 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 FRMPD4Q14CM0 1322 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 ADGRA2Q96PE1 1338 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 MYH6P13533 1939 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 SPATA31C2B4DYI2 1134 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 OPLAHO14841 1288 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 CTAGE5O15320 804 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 ZEB2O60315 1214 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 MSCO60682 206 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 KPNA6O60684 536 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 GAS7O60861 476 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 PRPF40AO75400 957 aaKnown RBP8.35□□□□□ -1.07
EPHA4-210ENST00000463446 TBC1D8O95759 1140 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 MYL1P05976 194 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 EIF2AK2P19525 551 aaKnown RBP8.35□□□□□ -1.07
EPHA4-210ENST00000463446 EDNRBP24530 442 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 MCM4P33991 863 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 TXKP42681 527 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 TOB1P50616 345 aaPredicted RBP8.35□□□□□ -1.07
EPHA4-210ENST00000463446 JAK3P52333 1124 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 CEBPZQ03701 1054 aaKnown RBP8.35□□□□□ -1.07
EPHA4-210ENST00000463446 LAMC2Q13753 1193 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 CCDC73Q6ZRK6 1079 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 OTUD6AQ7L8S5 288 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 ELOA2Q8IYF1 753 aaPredicted RBP8.35□□□□□ -1.07
EPHA4-210ENST00000463446 IQUBQ8NA54 791 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 RASSF8Q8NHQ8 419 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 RAET1EQ8TD07 263 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 CRYGNQ8WXF5 182 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 TBC1D5Q92609 795 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 CDK5RAP3Q96JB5 506 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 INPP4AQ96PE3 977 aaPredicted RBP8.35□□□□□ -1.07
EPHA4-210ENST00000463446 TINF2Q9BSI4 451 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 TEKT3Q9BXF9 490 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 PORCNQ9H237 461 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 TTC12Q9H892 705 aaPredicted RBP8.35□□□□□ -1.07
EPHA4-210ENST00000463446 MAGEF1Q9HAY2 307 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 KCNH7Q9NS40 1196 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 BMP2KQ9NSY1 1161 aaPredicted RBP8.35□□□□□ -1.07
EPHA4-210ENST00000463446 TMEM260Q9NX78 707 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 WBP1LQ9NX94 342 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 LRWD1Q9UFC0 647 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 FAM184BQ9ULE4 1060 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 PCDHB6Q9Y5E3 794 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 OTOFQ9HC10 1997 aa8.35□□□□□ -1.07
EPHA4-210ENST00000463446 KIF28PB7ZC32 967 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 TECP42680 631 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 SLC26A2P50443 739 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 PKP1Q13835 747 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 ZRSR1Q15695 479 aaKnown RBP8.34□□□□□ -1.07
EPHA4-210ENST00000463446 LRCH2Q5VUJ6 765 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 ZNF746Q6NUN9 644 aaPredicted RBP8.34□□□□□ -1.07
EPHA4-210ENST00000463446 SLAIN1Q8ND83 568 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 RASGRP4Q8TDF6 673 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 CCDC47Q96A33 483 aaKnown RBP8.34□□□□□ -1.07
EPHA4-210ENST00000463446 MAML3Q96JK9 1138 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 TIGD1Q96MW7 591 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 MTMR9Q96QG7 549 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 USP28Q96RU2 1077 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 SEZ6LQ9BYH1 1024 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 CCSER1Q9C0I3 900 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 MLXIPQ9HAP2 919 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 SRRDQ9UH36 339 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 GJD2Q9UKL4 321 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 PPME1Q9Y570 386 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 PCDHA10Q9Y5I2 948 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 CLIC4Q9Y696 253 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 MRVI1Q9Y6F6 885 aa8.34□□□□□ -1.07
EPHA4-210ENST00000463446 BAZ2BQ9UIF8 2168 aaKnown RBP8.34□□□□□ -1.08
EPHA4-210ENST00000463446 KDM3AQ9Y4C1 1321 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 PTPRFP10586 1907 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 NOP56O00567 594 aaKnown RBP8.33□□□□□ -1.08
EPHA4-210ENST00000463446 PPFIA4O75335 1185 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 PGK2P07205 417 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 P4HBP07237 508 aaKnown RBP8.33□□□□□ -1.08
EPHA4-210ENST00000463446 PSAPP07602 524 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 TXNP10599 105 aaKnown RBP8.33□□□□□ -1.08
EPHA4-210ENST00000463446 CTCFP49711 727 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-210ENST00000463446 UBXN2AP68543 259 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 CNTN2Q02246 1040 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 PPP2R5CQ13362 524 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 ACVR2BQ13705 512 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 PTPAQ15257 358 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 EPHA7Q15375 998 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 FOXD4L6Q3SYB3 417 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-210ENST00000463446 FAM160B1Q5W0V3 765 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 MIS18BP1Q6P0N0 1132 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 FOXD4L3Q6VB84 417 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-210ENST00000463446 SLC30A10Q6XR72 485 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 ARMCX2Q7L311 632 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 OTOP1Q7RTM1 612 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 DHX37Q8IY37 1157 aaKnown RBP8.33□□□□□ -1.08
EPHA4-210ENST00000463446 CEP57L1Q8IYX8 460 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 ZNF710Q8N1W2 664 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 SEPT1Q8WYJ6 367 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 MRPS27Q92552 414 aaKnown RBP8.33□□□□□ -1.08
EPHA4-210ENST00000463446 USP6NLQ92738 828 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 SLC5A5Q92911 643 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms