RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 ADCY7P51828 1080 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 EVCP57679 992 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 CHMP4BP1P59074 171 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 PTPN11Q06124 597 aaPredicted RBP18.63■□□□□ 0.57
COL1A1-202ENST00000463440 SHHQ15465 462 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 NLRX1Q86UT6 975 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 SPATA33Q96N06 139 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 HIPK3Q9H422 1215 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 RIC8AQ9NPQ8 531 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 BARHL2Q9NY43 387 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 PCDHA6Q9UN73 950 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 PCDHA8Q9Y5H6 950 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 MYH7BA7E2Y1 1941 aa18.62■□□□□ 0.57
COL1A1-202ENST00000463440 SPATA31C2B4DYI2 1134 aa18.62■□□□□ 0.57
COL1A1-202ENST00000463440 STXBP3O00186 592 aa18.62■□□□□ 0.57
COL1A1-202ENST00000463440 PPFIA4O75335 1185 aa18.62■□□□□ 0.57
COL1A1-202ENST00000463440 AKAP17AQ02040 695 aaKnown RBP18.62■□□□□ 0.57
COL1A1-202ENST00000463440 SP2Q02086 613 aa18.62■□□□□ 0.57
COL1A1-202ENST00000463440 PPIGQ13427 754 aaKnown RBP eCLIP18.62■□□□□ 0.57
COL1A1-202ENST00000463440 NEDD9Q14511 834 aa18.62■□□□□ 0.57
COL1A1-202ENST00000463440 PFKFB3Q16875 520 aaPredicted RBP18.62■□□□□ 0.57
COL1A1-202ENST00000463440 LRCH3Q96II8 777 aa18.62■□□□□ 0.57
COL1A1-202ENST00000463440 KATNAL1Q9BW62 490 aa18.62■□□□□ 0.57
COL1A1-202ENST00000463440 TRMT13Q9NUP7 481 aaKnown RBP18.62■□□□□ 0.57
COL1A1-202ENST00000463440 SMCO2A6NFE2 343 aa18.61■□□□□ 0.57
COL1A1-202ENST00000463440 SORBS3O60504 671 aa18.61■□□□□ 0.57
COL1A1-202ENST00000463440 FOSP01100 380 aaPredicted RBP18.61■□□□□ 0.57
COL1A1-202ENST00000463440 SCG2P13521 617 aa18.61■□□□□ 0.57
COL1A1-202ENST00000463440 PDIA3P30101 505 aaKnown RBP18.61■□□□□ 0.57
COL1A1-202ENST00000463440 CYP2C18P33260 490 aa18.61■□□□□ 0.57
COL1A1-202ENST00000463440 TOB2Q14106 344 aaPredicted RBP18.61■□□□□ 0.57
COL1A1-202ENST00000463440 C9orf50Q5SZB4 431 aa18.61■□□□□ 0.57
COL1A1-202ENST00000463440 TYW1BQ6NUM6 668 aa18.61■□□□□ 0.57
COL1A1-202ENST00000463440 CDHR1Q96JP9 859 aa18.61■□□□□ 0.57
COL1A1-202ENST00000463440 UPF3BQ9BZI7 483 aaKnown RBP18.61■□□□□ 0.57
COL1A1-202ENST00000463440 PDRG1Q9NUG6 133 aa18.61■□□□□ 0.57
COL1A1-202ENST00000463440 NOP56O00567 594 aaKnown RBP18.6■□□□□ 0.57
COL1A1-202ENST00000463440 PRPF3O43395 683 aaKnown RBP18.6■□□□□ 0.57
COL1A1-202ENST00000463440 HOXD8P13378 290 aaPredicted RBP18.6■□□□□ 0.57
COL1A1-202ENST00000463440 EPHB4P54760 987 aa18.6■□□□□ 0.57
COL1A1-202ENST00000463440 SEMA3FQ13275 785 aa18.6■□□□□ 0.57
COL1A1-202ENST00000463440 HSDL1Q3SXM5 330 aa18.6■□□□□ 0.57
COL1A1-202ENST00000463440 GPR153Q6NV75 609 aa18.6■□□□□ 0.57
COL1A1-202ENST00000463440 CCDC12Q8WUD4 166 aaPredicted RBP18.6■□□□□ 0.57
COL1A1-202ENST00000463440 KAT2BQ92831 832 aa18.6■□□□□ 0.57
COL1A1-202ENST00000463440 GPRASP2Q96D09 838 aa18.6■□□□□ 0.57
COL1A1-202ENST00000463440 SENP7Q9BQF6 1050 aa18.6■□□□□ 0.57
COL1A1-202ENST00000463440 NOC4LQ9BVI4 516 aaKnown RBP18.6■□□□□ 0.57
COL1A1-202ENST00000463440 NOD1Q9Y239 953 aa18.6■□□□□ 0.57
COL1A1-202ENST00000463440 F2P00734 622 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 ZNF286BP0CG31 522 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 CYP2C9P11712 490 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 CSF2RAP15509 400 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 IFNAR1P17181 557 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 PSEN2P49810 448 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 ANAPC15P60006 121 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 CCT2P78371 535 aaKnown RBP18.59■□□□□ 0.57
COL1A1-202ENST00000463440 MFSD10Q14728 455 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 METTL7BQ6UX53 244 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 CYFIP1Q7L576 1253 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 SESTD1Q86VW0 696 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 GIMAP8Q8ND71 665 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-202ENST00000463440 PPP1R13LQ8WUF5 828 aa18.59■□□□□ 0.57
COL1A1-202ENST00000463440 ZNF274Q96GC6 653 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-202ENST00000463440 RNPC3Q96LT9 517 aaKnown RBP18.59■□□□□ 0.57
COL1A1-202ENST00000463440 RNF26Q9BY78 433 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-202ENST00000463440 AP3B2Q13367 1082 aa18.58■□□□□ 0.56
COL1A1-202ENST00000463440 NTRK3Q16288 839 aa18.58■□□□□ 0.56
COL1A1-202ENST00000463440 C7orf31Q8N865 590 aa18.58■□□□□ 0.56
COL1A1-202ENST00000463440 PHKBQ93100 1093 aa18.58■□□□□ 0.56
COL1A1-202ENST00000463440 ALG1Q9BT22 464 aa18.58■□□□□ 0.56
COL1A1-202ENST00000463440 SLC26A6Q9BXS9 759 aa18.58■□□□□ 0.56
COL1A1-202ENST00000463440 NCOA5Q9HCD5 579 aaKnown RBP18.58■□□□□ 0.56
COL1A1-202ENST00000463440 UBIAD1Q9Y5Z9 338 aa18.58■□□□□ 0.56
COL1A1-202ENST00000463440 UMODL1Q5DID0 1318 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 ESYT2A0FGR8 921 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 HAS3O00219 553 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 CPLX1O14810 134 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 MAFGO15525 162 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 ITGB5P18084 799 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 CCL23P55773 120 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 MTMR1Q13613 665 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 PKN1Q16512 942 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 PTGISQ16647 500 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 KIAA0753Q2KHM9 967 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 MCTP2Q6DN12 878 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 PSRC1Q6PGN9 363 aaPredicted RBP18.57■□□□□ 0.56
COL1A1-202ENST00000463440 TRIM22Q8IYM9 498 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 ANO3Q9BYT9 981 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 BCAS3Q9H6U6 928 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 C6orf50Q9HD87 102 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 IL23AQ9NPF7 189 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 JADE2Q9NQC1 790 aa18.57■□□□□ 0.56
COL1A1-202ENST00000463440 GNA11P29992 359 aa18.56■□□□□ 0.56
COL1A1-202ENST00000463440 CLK2P49760 499 aaKnown RBP18.56■□□□□ 0.56
COL1A1-202ENST00000463440 BFSP2Q13515 415 aa18.56■□□□□ 0.56
COL1A1-202ENST00000463440 TMEM240Q5SV17 173 aa18.56■□□□□ 0.56
COL1A1-202ENST00000463440 GDF6Q6KF10 455 aaPredicted RBP18.56■□□□□ 0.56
COL1A1-202ENST00000463440 CPLX2Q6PUV4 134 aaKnown RBP18.56■□□□□ 0.56
COL1A1-202ENST00000463440 CCDC155Q8N6L0 562 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms