RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 OR6P1Q8NGX9 317 aa6.22□□□□□ -1.41
USH2A-203ENST00000463147 CLIC6Q96NY7 704 aa6.22□□□□□ -1.41
USH2A-203ENST00000463147 LTBP3Q9NS15 1303 aa6.22□□□□□ -1.41
USH2A-203ENST00000463147 GPR42O15529 346 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 EPHX1P07099 455 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 ATP2B1P20020 1258 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 GTF2A2P52657 109 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 TGFB2P61812 414 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 RBL2Q08999 1139 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 RUFY4Q6ZNE9 571 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 MCF2L2Q86YR7 1114 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 KLHL36Q8N4N3 616 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 COPS5Q92905 334 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 YTHDC1Q96MU7 727 aaKnown RBP6.21□□□□□ -1.42
USH2A-203ENST00000463147 PIF1Q9H611 641 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 INPP5FQ9Y2H2 1132 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 HS3ST3A1Q9Y663 406 aa6.21□□□□□ -1.42
USH2A-203ENST00000463147 PATE3B3GLJ2 98 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 C22orf46C9J442 243 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 THBDP07204 575 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 NAT2P11245 290 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 IL13P35225 146 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 CCDC144BQ3MJ40 725 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 ZNF585AQ6P3V2 769 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 STK32CQ86UX6 486 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 FGD4Q96M96 766 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 BARX1Q9HBU1 254 aaPredicted RBP6.2□□□□□ -1.42
USH2A-203ENST00000463147 CLEC1BQ9P126 229 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 FTSJ1Q9UET6 329 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 PPT2Q9UMR5 302 aa6.2□□□□□ -1.42
USH2A-203ENST00000463147 ZNF623O75123 536 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 FGRP09769 529 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 PLS3P13797 630 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 GJA8P48165 433 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 RPL11P62913 178 aaKnown RBP6.19□□□□□ -1.42
USH2A-203ENST00000463147 ARID5AQ03989 594 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 PAK2Q13177 524 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 ADAM9Q13443 819 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 ZNF662Q6ZS27 426 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 PALM2Q8IXS6 379 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 KBTBD2Q8IY47 623 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 IGDCC4Q8TDY8 1250 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 MBD6Q96DN6 1003 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 TOE1Q96GM8 510 aaKnown RBP6.19□□□□□ -1.42
USH2A-203ENST00000463147 TMEM209Q96SK2 561 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 AKT3Q9Y243 479 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 ZNF652Q9Y2D9 606 aa6.19□□□□□ -1.42
USH2A-203ENST00000463147 ANKRD34BA5PLL1 514 aa6.18□□□□□ -1.42
USH2A-203ENST00000463147 CR1LQ2VPA4 569 aa6.18□□□□□ -1.42
USH2A-203ENST00000463147 TEX2Q8IWB9 1127 aa6.18□□□□□ -1.42
USH2A-203ENST00000463147 TIMM13Q9Y5L4 95 aaPredicted RBP6.18□□□□□ -1.42
USH2A-203ENST00000463147 NOP56O00567 594 aaKnown RBP6.17□□□□□ -1.42
USH2A-203ENST00000463147 MYO1BO43795 1136 aa6.17□□□□□ -1.42
USH2A-203ENST00000463147 ATF4P18848 351 aaPredicted RBP6.17□□□□□ -1.42
USH2A-203ENST00000463147 ZNF143P52747 638 aaPredicted RBP6.17□□□□□ -1.42
USH2A-203ENST00000463147 EIF6P56537 245 aaKnown RBP6.17□□□□□ -1.42
USH2A-203ENST00000463147 SCRN1Q12765 414 aa6.17□□□□□ -1.42
USH2A-203ENST00000463147 R3HDM1Q15032 1099 aaKnown RBP6.17□□□□□ -1.42
USH2A-203ENST00000463147 E4F1Q66K89 784 aaPredicted RBP6.17□□□□□ -1.42
USH2A-203ENST00000463147 PMFBP1Q8TBY8 1022 aa6.17□□□□□ -1.42
USH2A-203ENST00000463147 DPF3Q92784 378 aa6.17□□□□□ -1.42
USH2A-203ENST00000463147 ARMC5Q96C12 935 aa6.17□□□□□ -1.42
USH2A-203ENST00000463147 SYT3Q9BQG1 590 aa6.17□□□□□ -1.42
USH2A-203ENST00000463147 DTLQ9NZJ0 730 aa6.17□□□□□ -1.42
USH2A-203ENST00000463147 COA3Q9Y2R0 106 aaPredicted RBP6.17□□□□□ -1.42
USH2A-203ENST00000463147 X6R8D5 127 aa6.17□□□□□ -1.42
USH2A-203ENST00000463147 STAT5AP42229 794 aa6.16□□□□□ -1.42
USH2A-203ENST00000463147 GNL2Q13823 731 aaKnown RBP6.16□□□□□ -1.42
USH2A-203ENST00000463147 Q8N1Y9 231 aa6.16□□□□□ -1.42
USH2A-203ENST00000463147 TRMT2BQ96GJ1 504 aaKnown RBP6.16□□□□□ -1.42
USH2A-203ENST00000463147 ZNF341Q9BYN7 854 aa6.16□□□□□ -1.42
USH2A-203ENST00000463147 SEC61A2Q9H9S3 476 aa6.16□□□□□ -1.42
USH2A-203ENST00000463147 CYP26B1Q9NR63 512 aa6.16□□□□□ -1.42
USH2A-203ENST00000463147 BTG4Q9NY30 223 aa6.16□□□□□ -1.42
USH2A-203ENST00000463147 EMC9Q9Y3B6 208 aa6.16□□□□□ -1.42
USH2A-203ENST00000463147 HGSO14964 777 aaPredicted RBP6.15□□□□□ -1.42
USH2A-203ENST00000463147 B4GALT4O60513 344 aa6.15□□□□□ -1.42
USH2A-203ENST00000463147 HMGB1P09429 215 aaKnown RBP6.15□□□□□ -1.42
USH2A-203ENST00000463147 NFATC3Q12968 1075 aa6.15□□□□□ -1.42
USH2A-203ENST00000463147 KLF10Q13118 480 aa6.15□□□□□ -1.42
USH2A-203ENST00000463147 SPDYAQ5MJ70 313 aa6.15□□□□□ -1.42
USH2A-203ENST00000463147 NOP9Q86U38 636 aaKnown RBP6.15□□□□□ -1.42
USH2A-203ENST00000463147 BVESQ8NE79 360 aa6.15□□□□□ -1.42
USH2A-203ENST00000463147 APBA2Q99767 749 aa6.15□□□□□ -1.42
USH2A-203ENST00000463147 WDR33Q9C0J8 1336 aaKnown RBP6.15□□□□□ -1.43
USH2A-203ENST00000463147 A0A1W2PQH9 124 aa6.14□□□□□ -1.43
USH2A-203ENST00000463147 TLDC2A0PJX2 215 aa6.14□□□□□ -1.43
USH2A-203ENST00000463147 KCNH1O95259 989 aa6.14□□□□□ -1.43
USH2A-203ENST00000463147 GIPRP48546 466 aa6.14□□□□□ -1.43
USH2A-203ENST00000463147 PRKD1Q15139 912 aaPredicted RBP6.14□□□□□ -1.43
USH2A-203ENST00000463147 SMN1Q16637 294 aaKnown RBP6.14□□□□□ -1.43
USH2A-203ENST00000463147 MBLAC2Q68D91 279 aa6.14□□□□□ -1.43
USH2A-203ENST00000463147 CEP68Q76N32 757 aa6.14□□□□□ -1.43
USH2A-203ENST00000463147 KLHL6Q8WZ60 621 aa6.14□□□□□ -1.43
USH2A-203ENST00000463147 TMEM169Q96HH4 297 aa6.14□□□□□ -1.43
USH2A-203ENST00000463147 GPRC5CQ9NQ84 441 aa6.14□□□□□ -1.43
USH2A-203ENST00000463147 CROTQ9UKG9 612 aa6.14□□□□□ -1.43
USH2A-203ENST00000463147 TBX22Q9Y458 520 aa6.14□□□□□ -1.43
USH2A-203ENST00000463147 MAFKO60675 156 aa6.13□□□□□ -1.43
USH2A-203ENST00000463147 CHGBP05060 677 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms