RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 TTLL4Q14679 1199 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 KIZQ2M2Z5 673 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 GDF6Q6KF10 455 aaPredicted RBP3.8□□□□□ -1.8
SMC4-203ENST00000462668 FSTL4Q6MZW2 842 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 USP53Q70EK8 1073 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 RASSF1Q9NS23 344 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 PUF60Q9UHX1 559 aaKnown RBP3.8□□□□□ -1.8
SMC4-203ENST00000462668 TCRBV5S4A2TA0A5A2 114 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 PTPDC1A2A3K4 754 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 GSNP06396 782 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 RBM10P98175 930 aaKnown RBP3.8□□□□□ -1.8
SMC4-203ENST00000462668 KCNAB2Q13303 367 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 PHF20Q9BVI0 1012 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 PPCSQ9HAB8 311 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 H2AFY2Q9P0M6 372 aaPredicted RBP3.8□□□□□ -1.8
SMC4-203ENST00000462668 TUBD1Q9UJT1 453 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 RCAN3Q9UKA8 241 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 B3GALT1Q9Y5Z6 326 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 CCDC66A2RUB6 948 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 FAM227AF5H4B4 570 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 GAS7O60861 476 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 MT-CO1P00395 513 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 LTBRP36941 435 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 PAK1Q13153 545 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 PDE3AQ14432 1141 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 CCDC70Q6NSX1 233 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 ESRP1Q6NXG1 681 aaKnown RBP3.8□□□□□ -1.8
SMC4-203ENST00000462668 C1orf122Q6ZSJ8 110 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 ARMCX6Q7L4S7 300 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 CATIPQ7Z7H3 387 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 FAM186BQ8IYM0 893 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 CPXCR1Q8N123 301 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 UBASH3BQ8TF42 649 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 FCRL3Q96P31 734 aaPredicted RBP3.8□□□□□ -1.8
SMC4-203ENST00000462668 MYD88Q99836 296 aa3.8□□□□□ -1.8
SMC4-203ENST00000462668 SHISA8B8ZZ34 492 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 TERTO14746 1132 aaKnown RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 DDX3YO15523 660 aaKnown RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 OFD1O75665 1012 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 WISP1O95388 367 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 LSP1P33241 339 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 EPHA5P54756 1037 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 MRPS9P82933 396 aaKnown RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 PRR16Q569H4 304 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 ANGEL2Q5VTE6 544 aaKnown RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 IQSEC1Q6DN90 963 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 SV2AQ7L0J3 742 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 VWA5B2Q8N398 1253 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 GOLGA6L1Q8N7Z2 621 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 RCBTB1Q8NDN9 531 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 DPH2Q9BQC3 489 aaPredicted RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 MKRN2Q9H000 416 aaKnown RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 GGA1Q9UJY5 639 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 RNF112Q9ULX5 631 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 ACTL7BQ9Y614 415 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 WASHC2AQ641Q2 1341 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 B3GALT2O43825 422 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 LCP1P13796 627 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 HSD3B1P14060 373 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 EDNRBP24530 442 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 BMP8BP34820 402 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 SCRN1Q12765 414 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 RTP2Q5QGT7 225 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 FAM117BQ6P1L5 589 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 DPP9Q86TI2 863 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 CMIPQ8IY22 773 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 WNT8AQ9H1J5 351 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 BHMT2Q9H2M3 363 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 TOPORSQ9NS56 1045 aaPredicted RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 THG1LQ9NWX6 298 aaKnown RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 PDZRN3Q9UPQ7 1066 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 MAN1A2O60476 641 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 KPNA1P52294 538 aaPredicted RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 MMRN1Q13201 1228 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 MBLAC2Q68D91 279 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 NPAS3Q8IXF0 933 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 SH3RF2Q8TEC5 729 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 ELF4Q99607 663 aaPredicted RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 GDF15Q99988 308 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 GTPBP4Q9BZE4 634 aaKnown RBP3.79□□□□□ -1.8
SMC4-203ENST00000462668 SCOCQ9UIL1 159 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 COQ6Q9Y2Z9 468 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 X6R8D5 127 aa3.79□□□□□ -1.8
SMC4-203ENST00000462668 PRAMEF1O95521 474 aa3.78□□□□□ -1.8
SMC4-203ENST00000462668 NBPF7P0C2Y1 421 aaPredicted RBP3.78□□□□□ -1.8
SMC4-203ENST00000462668 ETV3P41162 512 aa3.78□□□□□ -1.8
SMC4-203ENST00000462668 CASP2P42575 452 aa3.78□□□□□ -1.8
SMC4-203ENST00000462668 FNTBP49356 437 aa3.78□□□□□ -1.8
SMC4-203ENST00000462668 AMPD2Q01433 879 aa3.78□□□□□ -1.8
SMC4-203ENST00000462668 INTS11Q5TA45 600 aaKnown RBP3.78□□□□□ -1.8
SMC4-203ENST00000462668 C16orf54Q6UWD8 224 aa3.78□□□□□ -1.8
SMC4-203ENST00000462668 PPIL6Q8IXY8 311 aa3.78□□□□□ -1.8
SMC4-203ENST00000462668 TMEM130Q8N3G9 435 aa3.78□□□□□ -1.8
SMC4-203ENST00000462668 NKAIN3Q8N8D7 197 aa3.78□□□□□ -1.8
SMC4-203ENST00000462668 TMEM169Q96HH4 297 aa3.78□□□□□ -1.8
SMC4-203ENST00000462668 ACO2Q99798 780 aaKnown RBP3.78□□□□□ -1.8
SMC4-203ENST00000462668 FAM105AQ9NUU6 356 aa3.78□□□□□ -1.8
SMC4-203ENST00000462668 C9orf78Q9NZ63 289 aaPredicted RBP3.78□□□□□ -1.8
SMC4-203ENST00000462668 PLA2G2EQ9NZK7 142 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms