RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 PTK7Q13308 1070 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 RAB3GAP1Q15042 981 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 HERC4Q5GLZ8 1057 aaPredicted RBP7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 TSHZ3Q63HK5 1081 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 LYPD8Q6UX82 237 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 HERC6Q8IVU3 1022 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 MAPKAPK5Q8IW41 473 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 ADHFE1Q8IWW8 467 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 SUGP1Q8IWZ8 645 aaKnown RBP7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 SLC43A3Q8NBI5 491 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 GDPD5Q8WTR4 605 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 NSUN4Q96CB9 384 aaKnown RBP7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 AGBL1Q96MI9 1066 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 SLC9A7Q96T83 725 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 HAUS7Q99871 368 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 ALG13Q9NP73 1137 aaKnown RBP7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 PIH1D3Q9NQM4 214 aaKnown RBP7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 PAG1Q9NWQ8 432 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 FAM50BQ9Y247 325 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 CHD6Q8TD26 2715 aa7.06□□□□□ -1.28
SMARCC1-204ENST00000462198 MYH8P13535 1937 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 MED19A0JLT2 244 aaPredicted RBP7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 H0Y858 1186 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 SLC25A27O95847 323 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 S1PR4O95977 384 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 PFKMP08237 780 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 CFHP08603 1231 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 SKIP12755 728 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 PTMSP20962 102 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 GJA9P57773 515 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 ITGA7Q13683 1181 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 KCTD2Q14681 263 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 TATDN1Q6P1N9 297 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 BLOC1S3Q6QNY0 202 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 EP400NLQ6ZTU2 488 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 RNF135Q8IUD6 432 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 FBXL6Q8N531 539 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 MB21D1Q8N884 522 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 NOL10Q9BSC4 688 aaKnown RBP7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 TANGO6Q9C0B7 1094 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.05□□□□□ -1.284e-23■□□□□ 8.3
SMARCC1-204ENST00000462198 UPF3AQ9H1J1 476 aaKnown RBP7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 ANTXR1Q9H6X2 564 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 TLR9Q9NR96 1032 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 PKD2L1Q9P0L9 805 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 SAP30BPQ9UHR5 308 aaKnown RBP7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 MTUS1Q9ULD2 1270 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 PKD1L2Q7Z442 2459 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 ROBO3Q96MS0 1386 aa7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 BAZ2AQ9UIF9 1905 aaKnown RBP7.05□□□□□ -1.28
SMARCC1-204ENST00000462198 TET1Q8NFU7 2136 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 GRIN2DO15399 1336 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 SALL3Q9BXA9 1300 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 ATRXP46100 2492 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 ZNF292O60281 2723 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 COL4A4P53420 1690 aaPredicted RBP7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 LCHNA4D1U4 455 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 CTAGE5O15320 804 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 B4GALT4O60513 344 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 BAG3O95817 575 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 SERPINB4P48594 390 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 SMCPP49901 116 aaPredicted RBP7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 BEX3Q00994 111 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 ACVR2BQ13705 512 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 ABCB5Q2M3G0 1257 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 CTC1Q2NKJ3 1217 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 NAA16Q6N069 864 aaPredicted RBP7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 CXCL17Q6UXB2 119 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 MAGEB6Q8N7X4 407 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 PI4K2BQ8TCG2 481 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 CNTNAP3BQ96NU0 1288 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 CNTNAP3Q9BZ76 1288 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 CABP5Q9NP86 173 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 AATFQ9NY61 560 aaKnown RBP eCLIP7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 ZHX1Q9UKY1 873 aaPredicted RBP7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 NAV1Q8NEY1 1877 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 MYO7AQ13402 2215 aa7.04□□□□□ -1.28
SMARCC1-204ENST00000462198 GVINP1Q7Z2Y8 2422 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 COL4A6Q14031 1691 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 ACACBO00763 2458 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 KMT2EQ8IZD2 1858 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 MCM3APO60318 1980 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 PRR23AA6NEV1 266 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 ADCY6O43306 1168 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 CABYRO75952 493 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 HLA-DOAP06340 250 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 CYP7A1P22680 504 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 AVPR2P30518 371 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 TERF1P54274 439 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 ERVK-21P61565 698 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 TMEM132BQ14DG7 1078 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 SWI5Q1ZZU3 235 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 LRRFIP1Q32MZ4 808 aaKnown RBP7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 CCDC144BQ3MJ40 725 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 CERKLQ49MI3 558 aaPredicted RBP7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 SLC9C2Q5TAH2 1124 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 ZSCAN25Q6NSZ9 544 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 NPAS4Q8IUM7 802 aa7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 MSL3Q8N5Y2 521 aaKnown RBP7.03□□□□□ -1.28
SMARCC1-204ENST00000462198 C1orf216Q8TAB5 229 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms