RNA–Protein interactions for RNA: ENST00000462151.5

SCAMP3-203, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-203ENST00000462151 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.21
SCAMP3-203ENST00000462151 PPM1EQ8WY54 764 aa13.77□□□□□ -0.21
SCAMP3-203ENST00000462151 CTAGE1Q96RT6 745 aa13.77□□□□□ -0.21
SCAMP3-203ENST00000462151 ALG1Q9BT22 464 aa13.77□□□□□ -0.21
SCAMP3-203ENST00000462151 MTA3Q9BTC8 594 aa13.77□□□□□ -0.21
SCAMP3-203ENST00000462151 HDAC6Q9UBN7 1215 aa13.77□□□□□ -0.21
SCAMP3-203ENST00000462151 TRIP12Q14669 1992 aaPredicted RBP13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 MYH7BA7E2Y1 1941 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 HAS3O00219 553 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 STAM2O75886 525 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 DDAH1O94760 285 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 KCNJ6P48051 423 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 PTK7Q13308 1070 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 HSDL1Q3SXM5 330 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 GNPTABQ3T906 1256 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 TJAP1Q5JTD0 557 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 ZNF654Q8IZM8 581 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 DHX38Q92620 1227 aaKnown RBP13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 MLXIPQ9HAP2 919 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 LY9Q9HBG7 655 aa13.76□□□□□ -0.21
SCAMP3-203ENST00000462151 TET1Q8NFU7 2136 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 FRMPD4Q14CM0 1322 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 KIF28PB7ZC32 967 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 PRC1O43663 620 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 SORBS3O60504 671 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 CA3P07451 260 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 CKBP12277 381 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 SMARCA1P28370 1054 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 GNAQP50148 359 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 SP2Q02086 613 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 HERC6Q8IVU3 1022 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 TMTC2Q8N394 836 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 PIBF1Q8WXW3 757 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 RRP36Q96EU6 259 aaKnown RBP13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 TMEM87BQ96K49 555 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 LZTS2Q9BRK4 669 aa13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 SEC63Q9UGP8 760 aaKnown RBP13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 SPTBN5Q9NRC6 3674 aaKnown RBP13.75□□□□□ -0.21
SCAMP3-203ENST00000462151 MCM5P33992 734 aa13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 CNKSR3Q6P9H4 555 aa13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 NFXL1Q6ZNB6 911 aa13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 ATXN2LQ8WWM7 1075 aaKnown RBP13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 CUL5Q93034 780 aa13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 ZFP91Q96JP5 570 aaPredicted RBP13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 INPP4AQ96PE3 977 aaPredicted RBP13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 ESYT1Q9BSJ8 1104 aa13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 MYL10Q9BUA6 226 aa13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 LSG1Q9H089 658 aaKnown RBP13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 PRDM6Q9NQX0 595 aa13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 THEGQ9P2T0 379 aa13.74□□□□□ -0.21
SCAMP3-203ENST00000462151 CCDC69A6NI79 296 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 NOP56O00567 594 aaKnown RBP13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 SH2B2O14492 632 aaPredicted RBP13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 SLC27A2O14975 620 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 FIBPO43427 364 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 EFCAB14O75071 495 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 CXCL10P02778 98 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 CALM1P0DP23 149 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 CALM2P0DP24 149 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 CALM3P0DP25 149 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 ICAM3P32942 547 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 MRPS9P82933 396 aaKnown RBP13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 NEDD9Q14511 834 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 GPNMBQ14956 572 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 CCDC85BQ15834 202 aaPredicted RBP13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 XRRA1Q6P2D8 792 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 SMARCC2Q8TAQ2 1214 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 GPKOWQ92917 476 aaPredicted RBP eCLIP13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 C16orf70Q9BSU1 422 aa13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 TSPYL2Q9H2G4 693 aaPredicted RBP13.73□□□□□ -0.21
SCAMP3-203ENST00000462151 ABHD14A-ACY1A0A1B0GW23 586 aa13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 C17orf102A2RUQ5 167 aa13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 SPATA31C2B4DYI2 1134 aa13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 H3BRB1 525 aa13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 PIK3CDO00329 1044 aa13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 TLL1O43897 1013 aa13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 NBNO60934 754 aa13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 LIFRP42702 1097 aa13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 WDR5P61964 334 aaKnown RBP13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 ZNF200P98182 395 aaPredicted RBP13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 TRIM71Q2Q1W2 868 aaKnown RBP13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 USP17L6PQ6QN14 398 aa13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 METTL7BQ6UX53 244 aa13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 TUT1Q9H6E5 874 aaKnown RBP13.72□□□□□ -0.21
SCAMP3-203ENST00000462151 EMSYQ7Z589 1322 aa13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 MEIS2O14770 477 aa13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 GTPBP6O43824 516 aaPredicted RBP13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 PLEKHA8P1O95397 391 aa13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 LGALS2P05162 132 aa13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 MRPS5P82675 430 aaKnown RBP13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 TAP1Q03518 808 aa13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 IKBKEQ14164 716 aa13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 NECTIN1Q15223 517 aa13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 ZNF618Q5T7W0 954 aa13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 PCNX4Q63HM2 1172 aa13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 TRAF7Q6Q0C0 670 aa13.71□□□□□ -0.21
SCAMP3-203ENST00000462151 CYFIP1Q7L576 1253 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms