RNA–Protein interactions for RNA: ENST00000461703.6

TNFRSF25-209, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-209ENST00000461703 GNAQP50148 359 aa26.23■■□□□ 1.79
TNFRSF25-209ENST00000461703 PTPN11Q06124 597 aaPredicted RBP26.23■■□□□ 1.79
TNFRSF25-209ENST00000461703 APOA5Q6Q788 366 aa26.23■■□□□ 1.79
TNFRSF25-209ENST00000461703 DEFB128Q7Z7B8 93 aa26.23■■□□□ 1.79
TNFRSF25-209ENST00000461703 SLC17A8Q8NDX2 589 aa26.23■■□□□ 1.79
TNFRSF25-209ENST00000461703 DHX38Q92620 1227 aaKnown RBP26.23■■□□□ 1.79
TNFRSF25-209ENST00000461703 ALG1Q9BT22 464 aa26.23■■□□□ 1.79
TNFRSF25-209ENST00000461703 RTEL1Q9NZ71 1219 aa26.23■■□□□ 1.79
TNFRSF25-209ENST00000461703 TELO2Q9Y4R8 837 aa26.23■■□□□ 1.79
TNFRSF25-209ENST00000461703 F2P00734 622 aa26.22■■□□□ 1.79
TNFRSF25-209ENST00000461703 HOXD8P13378 290 aaPredicted RBP26.22■■□□□ 1.79
TNFRSF25-209ENST00000461703 CPA1P15085 419 aa26.22■■□□□ 1.79
TNFRSF25-209ENST00000461703 PTGISQ16647 500 aa26.22■■□□□ 1.79
TNFRSF25-209ENST00000461703 SMARCC2Q8TAQ2 1214 aa26.22■■□□□ 1.79
TNFRSF25-209ENST00000461703 SPATA33Q96N06 139 aa26.22■■□□□ 1.79
TNFRSF25-209ENST00000461703 HDAC6Q9UBN7 1215 aa26.22■■□□□ 1.79
TNFRSF25-209ENST00000461703 CNTNAP5Q8WYK1 1306 aa26.21■■□□□ 1.79
TNFRSF25-209ENST00000461703 HAS3O00219 553 aa26.21■■□□□ 1.79
TNFRSF25-209ENST00000461703 HIC1Q14526 733 aa26.21■■□□□ 1.79
TNFRSF25-209ENST00000461703 MFSD10Q14728 455 aa26.21■■□□□ 1.79
TNFRSF25-209ENST00000461703 UBE2SQ16763 222 aa26.21■■□□□ 1.79
TNFRSF25-209ENST00000461703 TSGA10IPQ3SY00 556 aa26.21■■□□□ 1.79
TNFRSF25-209ENST00000461703 SESTD1Q86VW0 696 aa26.21■■□□□ 1.79
TNFRSF25-209ENST00000461703 TIFAQ96CG3 184 aa26.21■■□□□ 1.79
TNFRSF25-209ENST00000461703 INPP4AQ96PE3 977 aaPredicted RBP26.21■■□□□ 1.79
TNFRSF25-209ENST00000461703 NOD1Q9Y239 953 aa26.21■■□□□ 1.79
TNFRSF25-209ENST00000461703 CHD9Q3L8U1 2897 aa26.21■■□□□ 1.79
TNFRSF25-209ENST00000461703 PIK3CDO00329 1044 aa26.2■■□□□ 1.78
TNFRSF25-209ENST00000461703 GRIN2CQ14957 1233 aa26.2■■□□□ 1.78
TNFRSF25-209ENST00000461703 KIAA0753Q2KHM9 967 aa26.2■■□□□ 1.78
TNFRSF25-209ENST00000461703 DHX32Q7L7V1 743 aaKnown RBP26.2■■□□□ 1.78
TNFRSF25-209ENST00000461703 GTF2IRD1Q9UHL9 959 aa26.2■■□□□ 1.78
TNFRSF25-209ENST00000461703 IQCF3P0C7M6 154 aa26.19■■□□□ 1.78
TNFRSF25-209ENST00000461703 ZNF200P98182 395 aaPredicted RBP26.19■■□□□ 1.78
TNFRSF25-209ENST00000461703 KCNV1Q6PIU1 500 aa26.19■■□□□ 1.78
TNFRSF25-209ENST00000461703 WNT8BQ93098 351 aa26.19■■□□□ 1.78
TNFRSF25-209ENST00000461703 TMEM265A0A087WTH1 108 aa26.18■■□□□ 1.78
TNFRSF25-209ENST00000461703 PITPNM1O00562 1244 aa26.18■■□□□ 1.78
TNFRSF25-209ENST00000461703 RABGGTBP53611 331 aa26.18■■□□□ 1.78
TNFRSF25-209ENST00000461703 FUT2Q10981 343 aa26.18■■□□□ 1.78
TNFRSF25-209ENST00000461703 RPUSD2Q8IZ73 545 aaKnown RBP26.18■■□□□ 1.78
TNFRSF25-209ENST00000461703 CUL5Q93034 780 aa26.18■■□□□ 1.78
TNFRSF25-209ENST00000461703 C16orf70Q9BSU1 422 aa26.18■■□□□ 1.78
TNFRSF25-209ENST00000461703 ZNF576Q9H609 170 aa26.18■■□□□ 1.78
TNFRSF25-209ENST00000461703 YBX2Q9Y2T7 364 aaKnown RBP26.18■■□□□ 1.78
TNFRSF25-209ENST00000461703 ZBBXA8MT70 800 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 SPATA31C2B4DYI2 1134 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 TGFB3P10600 412 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 ICAM3P32942 547 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 GPNMBQ14956 572 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 PCNX4Q63HM2 1172 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 TYW1BQ6NUM6 668 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 HEATR3Q7Z4Q2 680 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 C7orf31Q8N865 590 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 PSTPIP2Q9H939 334 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 MLXIPQ9HAP2 919 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 FAM217BQ9NTX9 383 aaPredicted RBP26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 MYO9BQ13459 2157 aa26.17■■□□□ 1.78
TNFRSF25-209ENST00000461703 KLF18A0A0U1RQI7 1052 aa26.16■■□□□ 1.78
TNFRSF25-209ENST00000461703 PPFIA4O75335 1185 aa26.16■■□□□ 1.78
TNFRSF25-209ENST00000461703 RTN1Q16799 776 aa26.16■■□□□ 1.78
TNFRSF25-209ENST00000461703 GNPTABQ3T906 1256 aa26.16■■□□□ 1.78
TNFRSF25-209ENST00000461703 WWC2Q6AWC2 1192 aa26.16■■□□□ 1.78
TNFRSF25-209ENST00000461703 RETREG2Q8NC44 543 aa26.16■■□□□ 1.78
TNFRSF25-209ENST00000461703 KCNB2Q92953 911 aa26.16■■□□□ 1.78
TNFRSF25-209ENST00000461703 KATNAL1Q9BW62 490 aa26.16■■□□□ 1.78
TNFRSF25-209ENST00000461703 MTIF3Q9H2K0 278 aaKnown RBP26.16■■□□□ 1.78
TNFRSF25-209ENST00000461703 NKX2-4Q9H2Z4 354 aa26.16■■□□□ 1.78
TNFRSF25-209ENST00000461703 UNC80Q8N2C7 3258 aa26.16■■□□□ 1.78
TNFRSF25-209ENST00000461703 ZBTB43O43298 467 aa26.15■■□□□ 1.78
TNFRSF25-209ENST00000461703 FIBPO43427 364 aa26.15■■□□□ 1.78
TNFRSF25-209ENST00000461703 MYOGP15173 224 aa26.15■■□□□ 1.78
TNFRSF25-209ENST00000461703 CDC27P30260 824 aa26.15■■□□□ 1.78
TNFRSF25-209ENST00000461703 BFSP2Q13515 415 aa26.15■■□□□ 1.78
TNFRSF25-209ENST00000461703 SYNE3Q6ZMZ3 975 aa26.15■■□□□ 1.78
TNFRSF25-209ENST00000461703 CYFIP1Q7L576 1253 aa26.15■■□□□ 1.78
TNFRSF25-209ENST00000461703 SNX14Q9Y5W7 946 aa26.15■■□□□ 1.78
TNFRSF25-209ENST00000461703 SLC4A7Q9Y6M7 1214 aa26.15■■□□□ 1.78
TNFRSF25-209ENST00000461703 STAM2O75886 525 aa26.14■■□□□ 1.78
TNFRSF25-209ENST00000461703 LGALS2P05162 132 aa26.14■■□□□ 1.78
TNFRSF25-209ENST00000461703 FOSL2P15408 326 aa26.14■■□□□ 1.78
TNFRSF25-209ENST00000461703 HSPA4P34932 840 aa26.14■■□□□ 1.78
TNFRSF25-209ENST00000461703 KRT32Q14532 448 aa26.14■■□□□ 1.78
TNFRSF25-209ENST00000461703 TRIM50Q86XT4 487 aa26.14■■□□□ 1.78
TNFRSF25-209ENST00000461703 MAFAQ8NHW3 353 aaPredicted RBP26.14■■□□□ 1.78
TNFRSF25-209ENST00000461703 GOLGA8AA7E2F4 631 aa26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 GOLGA8BA8MQT2 603 aa26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 PFKMP08237 780 aa26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 RFC2P35250 354 aa26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 SP4Q02446 784 aa26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 TCTN1Q2MV58 587 aa26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 TRIM71Q2Q1W2 868 aaKnown RBP26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 METTL7BQ6UX53 244 aa26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 JAKMIP1Q96N16 626 aaKnown RBP26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 GPR20Q99678 358 aa26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 RBM28Q9NW13 759 aaKnown RBP26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 CHD7Q9P2D1 2997 aa26.13■■□□□ 1.77
TNFRSF25-209ENST00000461703 PRUNE2Q8WUY3 3088 aa26.12■■□□□ 1.77
TNFRSF25-209ENST00000461703 ATP9AO75110 1047 aa26.12■■□□□ 1.77
TNFRSF25-209ENST00000461703 CKBP12277 381 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms