RNA–Protein interactions for RNA: ENST00000461661.1

ITCH-203, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene ITCH, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-203ENST00000461661 STK32CQ86UX6 486 aa4.34□□□□□ -1.71
ITCH-203ENST00000461661 FAM126BQ8IXS8 530 aa4.34□□□□□ -1.71
ITCH-203ENST00000461661 KYQ8NBH2 561 aa4.34□□□□□ -1.71
ITCH-203ENST00000461661 ARRDC4Q8NCT1 418 aa4.34□□□□□ -1.71
ITCH-203ENST00000461661 ZNF669Q96BR6 464 aaPredicted RBP4.34□□□□□ -1.71
ITCH-203ENST00000461661 TEPSINQ96N21 525 aa4.34□□□□□ -1.71
ITCH-203ENST00000461661 PHF20Q9BVI0 1012 aa4.34□□□□□ -1.71
ITCH-203ENST00000461661 JAM3Q9BX67 310 aa4.34□□□□□ -1.71
ITCH-203ENST00000461661 TRIM55Q9BYV6 548 aa4.34□□□□□ -1.71
ITCH-203ENST00000461661 PCDH18Q9HCL0 1135 aa4.34□□□□□ -1.71
ITCH-203ENST00000461661 PPARGC1AQ9UBK2 798 aaKnown RBP4.34□□□□□ -1.71
ITCH-203ENST00000461661 BLACEA4D250 179 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 PRICKLE3O43900 615 aaPredicted RBP4.33□□□□□ -1.72
ITCH-203ENST00000461661 DGKIO75912 1065 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 THBS2P35442 1172 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 BUD31P41223 144 aaPredicted RBP4.33□□□□□ -1.72
ITCH-203ENST00000461661 SARSP49591 514 aaKnown RBP4.33□□□□□ -1.72
ITCH-203ENST00000461661 ITGA1P56199 1179 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 CHRNA2Q15822 529 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 PRR31Q5SQ13 230 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 NT5DC1Q5TFE4 455 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 KCNT2Q6UVM3 1135 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 RSPO2Q6UXX9 243 aaPredicted RBP4.33□□□□□ -1.72
ITCH-203ENST00000461661 ZC3H18Q86VM9 953 aaKnown RBP4.33□□□□□ -1.72
ITCH-203ENST00000461661 ZNF761Q86XN6 746 aaPredicted RBP4.33□□□□□ -1.72
ITCH-203ENST00000461661 CKAP2LQ8IYA6 745 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 DCAF4Q8WV16 495 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 EPB41L1Q9H4G0 881 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 NTMQ9P121 344 aa4.33□□□□□ -1.72
ITCH-203ENST00000461661 TRAV20A0A0B4J274 112 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 SMARCA5O60264 1052 aaPredicted RBP4.32□□□□□ -1.72
ITCH-203ENST00000461661 ADCY3O60266 1144 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 LRG1P02750 347 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 SYN1P17600 705 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 ATP2B1P20020 1258 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 RPL13P26373 211 aaKnown RBP4.32□□□□□ -1.72
ITCH-203ENST00000461661 ADAM9Q13443 819 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 SKOR2Q2VWA4 1001 aaPredicted RBP4.32□□□□□ -1.72
ITCH-203ENST00000461661 ZFYVE27Q5T4F4 411 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 LBX2Q6XYB7 198 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 TTLL7Q6ZT98 887 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 LRRC47Q8N1G4 583 aaKnown RBP4.32□□□□□ -1.72
ITCH-203ENST00000461661 TTLL6Q8N841 843 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 ADAMTS17Q8TE56 1095 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 TOE1Q96GM8 510 aaKnown RBP4.32□□□□□ -1.72
ITCH-203ENST00000461661 SPATA9Q9BWV2 254 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 TANGO6Q9C0B7 1094 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 CCDC113Q9H0I3 377 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 SLC6A20Q9NP91 592 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 DTLQ9NZJ0 730 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 WASF3Q9UPY6 502 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 PCDHB4Q9Y5E5 795 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 DUSP10Q9Y6W6 482 aa4.32□□□□□ -1.72
ITCH-203ENST00000461661 ASXL2Q76L83 1435 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 PDPK1O15530 556 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 NKX3-2P78367 333 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 RASGRF1Q13972 1273 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 RTP5Q14D33 572 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 FOXB2Q5VYV0 432 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 STYK1Q6J9G0 422 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 CYP4F22Q6NT55 531 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 TEPPQ6URK8 271 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 FERMT3Q86UX7 667 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 PIP4K2CQ8TBX8 421 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 C8orf37Q96NL8 207 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 ZFYVE21Q9BQ24 234 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 LNPKQ9C0E8 428 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 SMOC1Q9H4F8 434 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 NGRNQ9NPE2 291 aaKnown RBP4.31□□□□□ -1.72
ITCH-203ENST00000461661 USP40Q9NVE5 1235 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 HSPBP1Q9NZL4 362 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 MYOTQ9UBF9 498 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 ASH2LQ9UBL3 628 aa4.31□□□□□ -1.72
ITCH-203ENST00000461661 SLC27A2O14975 620 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 U2SURPO15042 1029 aaKnown RBP4.3□□□□□ -1.72
ITCH-203ENST00000461661 COL6A2P12110 1019 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 GRK2P25098 689 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 GRK3P35626 688 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 GJA9P57773 515 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 GPR85P60893 370 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 RBL2Q08999 1139 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 IFRD2Q12894 506 aaPredicted RBP4.3□□□□□ -1.72
ITCH-203ENST00000461661 SERINC3Q13530 473 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 HABP4Q5JVS0 413 aaKnown RBP4.3□□□□□ -1.72
ITCH-203ENST00000461661 NBPF6Q5VWK0 638 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 OTOP3Q7RTS5 596 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 RBM12BQ8IXT5 1001 aaKnown RBP4.3□□□□□ -1.72
ITCH-203ENST00000461661 IFNL3Q8IZI9 196 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.3□□□□□ -1.72
ITCH-203ENST00000461661 PHOSPHO1Q8TCT1 267 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 CLEC4DQ8WXI8 215 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 DDX1Q92499 740 aaKnown RBP4.3□□□□□ -1.72
ITCH-203ENST00000461661 NBPF4Q96M43 638 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 YIPF4Q9BSR8 244 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 PFDN2Q9UHV9 154 aa4.3□□□□□ -1.72
ITCH-203ENST00000461661 CCDC85CA6NKD9 419 aa4.29□□□□□ -1.72
ITCH-203ENST00000461661 KRIT1O00522 736 aa4.29□□□□□ -1.72
ITCH-203ENST00000461661 DDX3XO00571 662 aaKnown RBP eCLIP4.29□□□□□ -1.72
ITCH-203ENST00000461661 NKRFO15226 690 aaKnown RBP eCLIP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms