RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 IL13P35225 146 aa7.06□□□□□ -1.28
CFHR3-204ENST00000461558 GTF2A2P52657 109 aa7.06□□□□□ -1.28
CFHR3-204ENST00000461558 NCAPHQ15003 741 aa7.06□□□□□ -1.28
CFHR3-204ENST00000461558 DIO2Q92813 273 aa7.06□□□□□ -1.28
CFHR3-204ENST00000461558 ZSWIM3Q96MP5 696 aa7.06□□□□□ -1.28
CFHR3-204ENST00000461558 L2HGDHQ9H9P8 463 aa7.06□□□□□ -1.28
CFHR3-204ENST00000461558 TMEFF2Q9UIK5 374 aaPredicted RBP7.06□□□□□ -1.28
CFHR3-204ENST00000461558 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.06□□□□□ -1.28
CFHR3-204ENST00000461558 ARNTLO00327 626 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 MYO1BO43795 1136 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 VAMP1P23763 118 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 KCNAB2Q13303 367 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 CRB2Q5IJ48 1285 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 PKN3Q6P5Z2 889 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 BTN2A2Q8WVV5 523 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 TMEM169Q96HH4 297 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 CLIC6Q96NY7 704 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 CDK5RAP1Q96SZ6 601 aaKnown RBP7.05□□□□□ -1.28
CFHR3-204ENST00000461558 KLC2Q9H0B6 622 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 TMEM168Q9H0V1 697 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 CD248Q9HCU0 757 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 DTLQ9NZJ0 730 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 FBXL7Q9UJT9 491 aa7.05□□□□□ -1.28
CFHR3-204ENST00000461558 COA3Q9Y2R0 106 aaPredicted RBP7.05□□□□□ -1.28
CFHR3-204ENST00000461558 NPEPPSL1A6NEC2 478 aa7.04□□□□□ -1.28
CFHR3-204ENST00000461558 GPR42O15529 346 aa7.04□□□□□ -1.28
CFHR3-204ENST00000461558 CHRNA2Q15822 529 aa7.04□□□□□ -1.28
CFHR3-204ENST00000461558 DNERQ8NFT8 737 aa7.04□□□□□ -1.28
CFHR3-204ENST00000461558 TOE1Q96GM8 510 aaKnown RBP7.04□□□□□ -1.28
CFHR3-204ENST00000461558 SEC16BQ96JE7 1060 aa7.04□□□□□ -1.28
CFHR3-204ENST00000461558 VPS11Q9H270 941 aa7.04□□□□□ -1.28
CFHR3-204ENST00000461558 HGSO14964 777 aaPredicted RBP7.03□□□□□ -1.28
CFHR3-204ENST00000461558 MEFVO15553 781 aaPredicted RBP7.03□□□□□ -1.28
CFHR3-204ENST00000461558 TBX1O43435 398 aa7.03□□□□□ -1.28
CFHR3-204ENST00000461558 EPHB4P54760 987 aa7.03□□□□□ -1.28
CFHR3-204ENST00000461558 MLLT6P55198 1093 aaPredicted RBP7.03□□□□□ -1.28
CFHR3-204ENST00000461558 TEPPQ6URK8 271 aa7.03□□□□□ -1.28
CFHR3-204ENST00000461558 CIR1Q86X95 450 aaPredicted RBP7.03□□□□□ -1.28
CFHR3-204ENST00000461558 NT5DC4Q86YG4 428 aa7.03□□□□□ -1.28
CFHR3-204ENST00000461558 ARRDC4Q8NCT1 418 aa7.03□□□□□ -1.28
CFHR3-204ENST00000461558 IGDCC4Q8TDY8 1250 aa7.03□□□□□ -1.28
CFHR3-204ENST00000461558 ZCCHC14Q8WYQ9 949 aaKnown RBP7.03□□□□□ -1.28
CFHR3-204ENST00000461558 STRIP2Q9ULQ0 834 aa7.03□□□□□ -1.28
CFHR3-204ENST00000461558 PCDHB4Q9Y5E5 795 aa7.03□□□□□ -1.28
CFHR3-204ENST00000461558 TCRBV5S2A0A599 114 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 CYP7B1O75881 506 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 SCG5P05408 212 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 SNRPB2P08579 225 aaKnown RBP7.02□□□□□ -1.29
CFHR3-204ENST00000461558 HOXC12P31275 282 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 ECI1P42126 302 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 ACBD5Q5T8D3 534 aaPredicted RBP7.02□□□□□ -1.29
CFHR3-204ENST00000461558 TMCO4Q5TGY1 634 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 STEAP3Q658P3 488 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 KREMEN2Q8NCW0 462 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 RCBTB1Q8NDN9 531 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 WRNIP1Q96S55 665 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 TMEM209Q96SK2 561 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 ZNF747Q9BV97 191 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 CROTQ9UKG9 612 aa7.02□□□□□ -1.29
CFHR3-204ENST00000461558 H7BY64 318 aa7.01□□□□□ -1.29
CFHR3-204ENST00000461558 TADA3O75528 432 aa7.01□□□□□ -1.29
CFHR3-204ENST00000461558 PPP2CBP62714 309 aa7.01□□□□□ -1.29
CFHR3-204ENST00000461558 PPP2CAP67775 309 aa7.01□□□□□ -1.29
CFHR3-204ENST00000461558 TESK1Q15569 626 aa7.01□□□□□ -1.29
CFHR3-204ENST00000461558 EMC4Q5J8M3 183 aa7.01□□□□□ -1.29
CFHR3-204ENST00000461558 ARHGEF18Q6ZSZ5 1173 aa7.01□□□□□ -1.29
CFHR3-204ENST00000461558 ZNF227Q86WZ6 799 aa7.01□□□□□ -1.29
CFHR3-204ENST00000461558 KBTBD2Q8IY47 623 aa7.01□□□□□ -1.29
CFHR3-204ENST00000461558 ANAPC16Q96DE5 110 aa7.01□□□□□ -1.29
CFHR3-204ENST00000461558 PCED1AQ9H1Q7 454 aa7.01□□□□□ -1.29
CFHR3-204ENST00000461558 LRG1P02750 347 aa7□□□□□ -1.29
CFHR3-204ENST00000461558 ITGAVP06756 1048 aa7□□□□□ -1.29
CFHR3-204ENST00000461558 LTBRP36941 435 aa7□□□□□ -1.29
CFHR3-204ENST00000461558 HDLBPQ00341 1268 aaKnown RBP7□□□□□ -1.29
CFHR3-204ENST00000461558 ZNF585AQ6P3V2 769 aa7□□□□□ -1.29
CFHR3-204ENST00000461558 KLHL36Q8N4N3 616 aa7□□□□□ -1.29
CFHR3-204ENST00000461558 JADE2Q9NQC1 790 aa7□□□□□ -1.29
CFHR3-204ENST00000461558 FTSJ1Q9UET6 329 aa7□□□□□ -1.29
CFHR3-204ENST00000461558 CPP00450 1065 aa6.99□□□□□ -1.29
CFHR3-204ENST00000461558 SELENOPP49908 381 aa6.99□□□□□ -1.29
CFHR3-204ENST00000461558 LSAMPQ13449 338 aa6.99□□□□□ -1.29
CFHR3-204ENST00000461558 PRSS53Q2L4Q9 553 aa6.99□□□□□ -1.29
CFHR3-204ENST00000461558 PALM2Q8IXS6 379 aa6.99□□□□□ -1.29
CFHR3-204ENST00000461558 PPIL6Q8IXY8 311 aa6.99□□□□□ -1.29
CFHR3-204ENST00000461558 DEF6Q9H4E7 631 aa6.99□□□□□ -1.29
CFHR3-204ENST00000461558 WASF3Q9UPY6 502 aa6.99□□□□□ -1.29
CFHR3-204ENST00000461558 PCDHA2Q9Y5H9 948 aa6.99□□□□□ -1.29
CFHR3-204ENST00000461558 PATE3B3GLJ2 98 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 DGKIO75912 1065 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 LCP1P13796 627 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 SF1Q15637 639 aaKnown RBP6.98□□□□□ -1.29
CFHR3-204ENST00000461558 SV2CQ496J9 727 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 SLFN13Q68D06 897 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 TRMT10BQ6PF06 316 aaKnown RBP6.98□□□□□ -1.29
CFHR3-204ENST00000461558 TMC5Q6UXY8 1006 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.98□□□□□ -1.29
CFHR3-204ENST00000461558 CHAMP1Q96JM3 812 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 CCDC140Q96MF4 163 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 WWC2-AS2Q96NR7 200 aa6.98□□□□□ -1.29
CFHR3-204ENST00000461558 PTPN18Q99952 460 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms