RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 SH3RF3Q8TEJ3 882 aaPredicted RBP15.85■□□□□ 0.13
NCL-207ENST00000461347 PKD2L1Q9P0L9 805 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 KDM3AQ9Y4C1 1321 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 ANKRD62A6NC57 917 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 MAP2K7O14733 419 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 KRT14P02533 472 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 IRAK1P51617 712 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 NAA25Q14CX7 972 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 GKAP1Q5VSY0 366 aaPredicted RBP15.85■□□□□ 0.13
NCL-207ENST00000461347 MYCT1Q8N699 235 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 GPR101Q96P66 508 aaPredicted RBP15.85■□□□□ 0.13
NCL-207ENST00000461347 SWAP70Q9UH65 585 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 DMGDHQ9UI17 866 aaKnown RBP15.85■□□□□ 0.13
NCL-207ENST00000461347 SEL1L2Q5TEA6 688 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 GIMAP8Q8ND71 665 aaPredicted RBP15.84■□□□□ 0.13
NCL-207ENST00000461347 STMN4Q9H169 189 aaPredicted RBP15.84■□□□□ 0.13
NCL-207ENST00000461347 GGA1Q9UJY5 639 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 PCDHA6Q9UN73 950 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 ATP8A1Q9Y2Q0 1164 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 PCDHA8Q9Y5H6 950 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 PIK3C2AO00443 1686 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 PHRF1Q9P1Y6 1649 aaKnown RBP15.84■□□□□ 0.13
NCL-207ENST00000461347 ORC4O43929 436 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 FAM83BQ5T0W9 1011 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 SPATS2Q86XZ4 545 aaKnown RBP15.84■□□□□ 0.13
NCL-207ENST00000461347 BARHL2Q9NY43 387 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 TMOD2Q9NZR1 351 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 MTUS1Q9ULD2 1270 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 PLAAQ9Y263 795 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 ATP6V0A2Q9Y487 856 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 PDS5AQ29RF7 1337 aaKnown RBP15.84■□□□□ 0.13
NCL-207ENST00000461347 PMS1P54277 932 aaKnown RBP15.84■□□□□ 0.13
NCL-207ENST00000461347 DENND2CQ68D51 928 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 ZNF34Q8IZ26 560 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 MGARPQ8TDB4 240 aa15.84■□□□□ 0.13
NCL-207ENST00000461347 NAP1L4Q99733 375 aaKnown RBP15.84■□□□□ 0.13
NCL-207ENST00000461347 NOVA2Q9UNW9 492 aaKnown RBP15.84■□□□□ 0.13
NCL-207ENST00000461347 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.84■□□□□ 0.13
NCL-207ENST00000461347 RGPD1P0DJD0 1748 aa15.83■□□□□ 0.13
NCL-207ENST00000461347 PGRMC1O00264 195 aaKnown RBP15.83■□□□□ 0.13
NCL-207ENST00000461347 HERVK_113P62684 666 aa15.83■□□□□ 0.13
NCL-207ENST00000461347 GUCY1A3Q02108 690 aa15.83■□□□□ 0.13
NCL-207ENST00000461347 EZH2Q15910 746 aaKnown RBP15.83■□□□□ 0.13
NCL-207ENST00000461347 PDXDC2PQ6P474 469 aa15.83■□□□□ 0.13
NCL-207ENST00000461347 ADGRA1Q86SQ6 560 aa15.83■□□□□ 0.13
NCL-207ENST00000461347 NSUN4Q96CB9 384 aaKnown RBP15.83■□□□□ 0.13
NCL-207ENST00000461347 JPH2Q9BR39 696 aaPredicted RBP15.83■□□□□ 0.13
NCL-207ENST00000461347 EMILIN3Q9NT22 766 aa15.83■□□□□ 0.13
NCL-207ENST00000461347 ZBTB21Q9ULJ3 1066 aa15.83■□□□□ 0.13
NCL-207ENST00000461347 RGS16O15492 202 aaPredicted RBP15.83■□□□□ 0.12
NCL-207ENST00000461347 CYP2J2P51589 502 aa15.83■□□□□ 0.12
NCL-207ENST00000461347 GTF2IP78347 998 aa15.83■□□□□ 0.12
NCL-207ENST00000461347 MYCBPQ99417 103 aaPredicted RBP15.83■□□□□ 0.12
NCL-207ENST00000461347 RAB17Q9H0T7 212 aa15.83■□□□□ 0.12
NCL-207ENST00000461347 CAPN6Q9Y6Q1 641 aa15.83■□□□□ 0.12
NCL-207ENST00000461347 MEIS1O00470 390 aa15.83■□□□□ 0.12
NCL-207ENST00000461347 EXOC3O60645 756 aa15.83■□□□□ 0.12
NCL-207ENST00000461347 IFNAR2P48551 515 aa15.83■□□□□ 0.12
NCL-207ENST00000461347 DHX9Q08211 1270 aaKnown RBP15.83■□□□□ 0.12
NCL-207ENST00000461347 TCP10Q12799 353 aa15.83■□□□□ 0.12
NCL-207ENST00000461347 LLGL1Q15334 1064 aa15.83■□□□□ 0.12
NCL-207ENST00000461347 ALKBH5Q6P6C2 394 aaKnown RBP15.83■□□□□ 0.12
NCL-207ENST00000461347 CCDC105Q8IYK2 499 aa15.83■□□□□ 0.12
NCL-207ENST00000461347 WHAMMQ8TF30 809 aa15.83■□□□□ 0.12
NCL-207ENST00000461347 RBM12Q9NTZ6 932 aaKnown RBP15.83■□□□□ 0.12
NCL-207ENST00000461347 CDK8P49336 464 aa15.82■□□□□ 0.12
NCL-207ENST00000461347 CCDC174Q6PII3 467 aa15.82■□□□□ 0.12
NCL-207ENST00000461347 SH2D4AQ9H788 454 aa15.82■□□□□ 0.12
NCL-207ENST00000461347 CLIC2O15247 247 aa15.82■□□□□ 0.12
NCL-207ENST00000461347 TDP2O95551 362 aa15.82■□□□□ 0.12
NCL-207ENST00000461347 FGFR2P21802 821 aa15.82■□□□□ 0.12
NCL-207ENST00000461347 GRM4Q14833 912 aa15.82■□□□□ 0.12
NCL-207ENST00000461347 POTEJP0CG39 1038 aa15.82■□□□□ 0.12
NCL-207ENST00000461347 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
NCL-207ENST00000461347 FBXW10Q5XX13 1052 aa15.82■□□□□ 0.12
NCL-207ENST00000461347 CCNL1Q9UK58 526 aaPredicted RBP15.82■□□□□ 0.12
NCL-207ENST00000461347 E2F5Q15329 346 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 MCTP2Q6DN12 878 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 SMIM5Q71RC9 77 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 DNAJC7Q99615 494 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 CORO7P57737 925 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 KCTD1Q719H9 257 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 CCDC50Q8IVM0 306 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 TPH2Q8IWU9 490 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 GUF1Q8N442 669 aaKnown RBP15.81■□□□□ 0.12
NCL-207ENST00000461347 NKX2-3Q8TAU0 364 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 CDCA7Q9BWT1 371 aaPredicted RBP15.81■□□□□ 0.12
NCL-207ENST00000461347 DDX47Q9H0S4 455 aaKnown RBP15.81■□□□□ 0.12
NCL-207ENST00000461347 PCDHA1Q9Y5I3 950 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 CARSP49589 748 aaKnown RBP15.81■□□□□ 0.12
NCL-207ENST00000461347 TMEM132AQ24JP5 1023 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 GLE1Q53GS7 698 aaKnown RBP15.81■□□□□ 0.12
NCL-207ENST00000461347 UBL4BQ8N7F7 174 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 SRP68Q9UHB9 627 aaKnown RBP15.81■□□□□ 0.12
NCL-207ENST00000461347 ASIC3Q9UHC3 531 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 HDAC9Q9UKV0 1011 aa15.81■□□□□ 0.12
NCL-207ENST00000461347 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
NCL-207ENST00000461347 WNT7AO00755 349 aa15.8■□□□□ 0.12
NCL-207ENST00000461347 PVALEFA0A1B0GWK0 134 aa15.8■□□□□ 0.12
NCL-207ENST00000461347 USP17L5A8MUK1 530 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms