RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 CCDC82Q8N4S0 544 aa14.44□□□□□ -0.1
HDAC4-207ENST00000461113 PIGSQ96S52 555 aa14.44□□□□□ -0.1
HDAC4-207ENST00000461113 MPHOSPH6Q99547 160 aaKnown RBP14.44□□□□□ -0.1
HDAC4-207ENST00000461113 MAF1Q9H063 256 aa14.44□□□□□ -0.1
HDAC4-207ENST00000461113 KCNH6Q9H252 994 aa14.44□□□□□ -0.1
HDAC4-207ENST00000461113 RIPK3Q9Y572 518 aa14.44□□□□□ -0.1
HDAC4-207ENST00000461113 ZNF536O15090 1300 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 GRIN2DO15399 1336 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 B4GALT4O60513 344 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 LPXNO60711 386 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 PLEKHA8P1O95397 391 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 AK2P54819 239 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 EVCP57679 992 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 NSMFQ6X4W1 530 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 SPRED2Q7Z698 418 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 DEFB128Q7Z7B8 93 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 SRBD1Q8N5C6 995 aaKnown RBP14.43□□□□□ -0.1
HDAC4-207ENST00000461113 TBC1D32Q96NH3 1257 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 ABHD16BQ9H3Z7 469 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 PCDHA1Q9Y5I3 950 aa14.43□□□□□ -0.1
HDAC4-207ENST00000461113 DNAJC25-GNG10A0A024R161 153 aa14.42□□□□□ -0.1
HDAC4-207ENST00000461113 PTPDC1A2A3K4 754 aa14.42□□□□□ -0.1
HDAC4-207ENST00000461113 B4DLN1 442 aa14.42□□□□□ -0.1
HDAC4-207ENST00000461113 MRPL12P52815 198 aaKnown RBP14.42□□□□□ -0.1
HDAC4-207ENST00000461113 CCT2P78371 535 aaKnown RBP14.42□□□□□ -0.1
HDAC4-207ENST00000461113 STK3Q13188 491 aa14.42□□□□□ -0.1
HDAC4-207ENST00000461113 NOL8Q76FK4 1167 aaKnown RBP14.42□□□□□ -0.1
HDAC4-207ENST00000461113 MTMR8Q96EF0 704 aa14.42□□□□□ -0.1
HDAC4-207ENST00000461113 PHOX2BQ99453 314 aa14.42□□□□□ -0.1
HDAC4-207ENST00000461113 UBE2ZQ9H832 354 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-207ENST00000461113 LIMCH1Q9UPQ0 1083 aa14.42□□□□□ -0.1
HDAC4-207ENST00000461113 GBF1Q92538 1859 aa14.42□□□□□ -0.1
HDAC4-207ENST00000461113 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-207ENST00000461113 CYTH3O43739 400 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 CABYRO75952 493 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 PFKMP08237 780 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 ADD1P35611 737 aaKnown RBP14.41□□□□□ -0.1
HDAC4-207ENST00000461113 MCM2P49736 904 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 PSMC6P62333 389 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 NKX3-2P78367 333 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 SSRP1Q08945 709 aaKnown RBP14.41□□□□□ -0.1
HDAC4-207ENST00000461113 RNF207Q6ZRF8 634 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.41□□□□□ -0.1
HDAC4-207ENST00000461113 ZNF467Q7Z7K2 595 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-207ENST00000461113 CMTR1Q8N1G2 835 aaKnown RBP14.41□□□□□ -0.1
HDAC4-207ENST00000461113 SAMD3Q8N6K7 520 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 RGS22Q8NE09 1264 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-207ENST00000461113 CUL5Q93034 780 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 ZSCAN31Q96LW9 406 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-207ENST00000461113 SLC9A7Q96T83 725 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 LARP6Q9BRS8 491 aaKnown RBP14.41□□□□□ -0.1
HDAC4-207ENST00000461113 ADD3Q9UEY8 706 aaKnown RBP14.41□□□□□ -0.1
HDAC4-207ENST00000461113 V9GY48 417 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-207ENST00000461113 ASTN1O14525 1302 aa14.41□□□□□ -0.1
HDAC4-207ENST00000461113 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-207ENST00000461113 KIF28PB7ZC32 967 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 hCG_1984214I3L0E3 225 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 DCXO43602 365 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 IL9P15248 144 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 CDC27P30260 824 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 LEXMQ3ZCV2 418 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 ARMCX2Q7L311 632 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 HEATR3Q7Z4Q2 680 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 HERC6Q8IVU3 1022 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 ZNF713Q8N859 430 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-207ENST00000461113 PHOSPHO2Q8TCD6 241 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 GDPD5Q8WTR4 605 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 CCDC12Q8WUD4 166 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-207ENST00000461113 A1CFQ9NQ94 594 aaKnown RBP14.4□□□□□ -0.1
HDAC4-207ENST00000461113 MAP3K20Q9NYL2 800 aaKnown RBP14.4□□□□□ -0.1
HDAC4-207ENST00000461113 TPCN1Q9ULQ1 816 aa14.4□□□□□ -0.1
HDAC4-207ENST00000461113 NID2Q14112 1375 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 GCOM1H8Y6P7 765 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-207ENST00000461113 PFKFB2O60825 505 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 POLR2MP0CAP2 368 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 ACTN1P12814 892 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 IFNAR1P17181 557 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 KCNA5P22460 613 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 CALML3P27482 149 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 TNFAIP2Q03169 654 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 BAATQ14032 418 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-207ENST00000461113 MUM1L1Q5H9M0 696 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 PTCRAQ6ISU1 281 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-207ENST00000461113 FGD4Q96M96 766 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 SLC26A6Q9BXS9 759 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 RNF26Q9BY78 433 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-207ENST00000461113 SEZ6LQ9BYH1 1024 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 GLT8D2Q9H1C3 349 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 SH2B1Q9NRF2 756 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-207ENST00000461113 LMCD1Q9NZU5 365 aa14.39□□□□□ -0.11
HDAC4-207ENST00000461113 POTEB3A0JP26 581 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 ASB14A6NK59 587 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 NFIBO00712 420 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 PRPF3O43395 683 aaKnown RBP14.38□□□□□ -0.11
HDAC4-207ENST00000461113 CFBP00751 764 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 CYP2C9P11712 490 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 XBP1P17861 261 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 PTGS1P23219 599 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 NAPAP54920 295 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms