RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 NFRKBQ6P4R8 1299 aa15.2■□□□□ 0.02
RAB11FIP3-207ENST00000461009 FAM161BQ96MY7 647 aa15.2■□□□□ 0.02
RAB11FIP3-207ENST00000461009 RNF26Q9BY78 433 aaPredicted RBP15.2■□□□□ 0.02
RAB11FIP3-207ENST00000461009 IL23AQ9NPF7 189 aa15.2■□□□□ 0.02
RAB11FIP3-207ENST00000461009 PXMP2Q9NR77 195 aa15.2■□□□□ 0.02
RAB11FIP3-207ENST00000461009 NOD1Q9Y239 953 aa15.2■□□□□ 0.02
RAB11FIP3-207ENST00000461009 MRVI1Q9Y6F6 885 aa15.2■□□□□ 0.02
RAB11FIP3-207ENST00000461009 GRIN2DO15399 1336 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 PIK3CDO00329 1044 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 PFKFB2O60825 505 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 FGBP02675 491 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 MYCLP12524 364 aaPredicted RBP15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 SCG2P13521 617 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 HOXA13P31271 388 aaPredicted RBP15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 NAPAP54920 295 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 LAMC2Q13753 1193 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 RABEP1Q15276 862 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 NTRK3Q16288 839 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 DGKDQ16760 1214 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 PFKFB3Q16875 520 aaPredicted RBP15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 LY6KQ17RY6 165 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 FCHSD1Q86WN1 690 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 RETREG2Q8NC44 543 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 CCDC12Q8WUD4 166 aaPredicted RBP15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 COPS5Q92905 334 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.19■□□□□ 0.022e-7■■■□□ 14.8
RAB11FIP3-207ENST00000461009 SLC26A6Q9BXS9 759 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 SEMA6BQ9H3T3 888 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 NCOA5Q9HCD5 579 aaKnown RBP15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 COL20A1Q9P218 1284 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 TPCN1Q9ULQ1 816 aa15.19■□□□□ 0.02
RAB11FIP3-207ENST00000461009 LAMA3Q16787 3333 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 CCND2P30279 289 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 CHMP4BP1P59074 171 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 NBPF20Q3BBV1 942 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 TMEM240Q5SV17 173 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 WWC2Q6AWC2 1192 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 CCDC62Q6P9F0 684 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 ZNF365Q70YC5 407 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 AFG1LQ8WV93 481 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 GPKOWQ92917 476 aaPredicted RBP eCLIP15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 PHKBQ93100 1093 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 NOC4LQ9BVI4 516 aaKnown RBP15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 KATNAL1Q9BW62 490 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 BACH2Q9BYV9 841 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 BARHL2Q9NY43 387 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 LIMCH1Q9UPQ0 1083 aa15.18■□□□□ 0.02
RAB11FIP3-207ENST00000461009 SMCO2A6NFE2 343 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 ARIH2O95376 493 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 PFKMP08237 780 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 ACRP10323 421 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 TGFB3P10600 412 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 ADCY7P51828 1080 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 CCL23P55773 120 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 BFSP2Q13515 415 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 USP17L6PQ6QN14 398 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 DHX37Q8IY37 1157 aaKnown RBP15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 CCDC155Q8N6L0 562 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 ZSCAN31Q96LW9 406 aaPredicted RBP15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 PDCD2LQ9BRP1 358 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 EHMT1Q9H9B1 1298 aa15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 TRMT13Q9NUP7 481 aaKnown RBP15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 DDX41Q9UJV9 622 aaKnown RBP15.17■□□□□ 0.02
RAB11FIP3-207ENST00000461009 SPDYE3A6NKU9 549 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 STXBP3O00186 592 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 MEIS2O14770 477 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 ST18O60284 1047 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 STAM2O75886 525 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 DEXIO95424 95 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 MMP3P08254 477 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 ACTN1P12814 892 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 GNA11P29992 359 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 ARHGAP1Q07960 439 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 SCRN1Q12765 414 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 PGM5Q15124 567 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 GNPTABQ3T906 1256 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 MCTP2Q6DN12 878 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 VSIG10LQ86VR7 867 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 CCDC148Q8NFR7 591 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 HERVK_113Q902F9 699 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 EMID1Q96A84 441 aaPredicted RBP15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 KIF2CQ99661 725 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 RIC8AQ9NPQ8 531 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 SH3GLB2Q9NR46 395 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 MSRAQ9UJ68 235 aa15.16■□□□□ 0.02
RAB11FIP3-207ENST00000461009 FOSP01100 380 aaPredicted RBP15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 CYP2C9P11712 490 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 DNAJB2P25686 324 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 RFC2P35250 354 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 RAB30Q15771 203 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 PKN1Q16512 942 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 ME3Q16798 604 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 XRRA1Q6P2D8 792 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 C16orf59Q7L2K0 433 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 FAM177A1Q8N128 213 aaPredicted RBP15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 C7orf31Q8N865 590 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 PPTC7Q8NI37 304 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 BICD2Q8TD16 824 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 WASF1Q92558 559 aa15.15■□□□□ 0.02
RAB11FIP3-207ENST00000461009 TIFAQ96CG3 184 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms