RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 RASSF7Q02833 373 aa17.09■□□□□ 0.33
SSR4-206ENST00000460616 TEX11Q8IYF3 940 aa17.09■□□□□ 0.33
SSR4-206ENST00000460616 ZSCAN10Q96SZ4 725 aaPredicted RBP17.09■□□□□ 0.33
SSR4-206ENST00000460616 KRT12Q99456 494 aa17.09■□□□□ 0.33
SSR4-206ENST00000460616 HAUS2Q9NVX0 235 aa17.09■□□□□ 0.33
SSR4-206ENST00000460616 GCOM1H8Y6P7 765 aaPredicted RBP17.08■□□□□ 0.33
SSR4-206ENST00000460616 POLRMTO00411 1230 aaKnown RBP17.08■□□□□ 0.33
SSR4-206ENST00000460616 PJA2O43164 708 aa17.08■□□□□ 0.33
SSR4-206ENST00000460616 MYZAPP0CAP1 466 aa17.08■□□□□ 0.33
SSR4-206ENST00000460616 SEMA3FQ13275 785 aa17.08■□□□□ 0.33
SSR4-206ENST00000460616 ANKRD20A8PQ5CZ79 823 aa17.08■□□□□ 0.33
SSR4-206ENST00000460616 IFIT1BQ5T764 474 aaKnown RBP17.08■□□□□ 0.33
SSR4-206ENST00000460616 RNF10Q8N5U6 811 aaKnown RBP17.08■□□□□ 0.33
SSR4-206ENST00000460616 C4orf32Q8N8J7 132 aa17.08■□□□□ 0.33
SSR4-206ENST00000460616 MTMR8Q96EF0 704 aa17.08■□□□□ 0.33
SSR4-206ENST00000460616 PLIN2Q99541 437 aa17.08■□□□□ 0.33
SSR4-206ENST00000460616 FAM207AQ9NSI2 230 aaPredicted RBP17.08■□□□□ 0.33
SSR4-206ENST00000460616 TPX2Q9ULW0 747 aaKnown RBP17.08■□□□□ 0.33
SSR4-206ENST00000460616 ANKRD31Q8N7Z5 1873 aa17.08■□□□□ 0.32
SSR4-206ENST00000460616 PPARDQ03181 441 aa17.08■□□□□ 0.32
SSR4-206ENST00000460616 TRADDQ15628 312 aa17.08■□□□□ 0.32
SSR4-206ENST00000460616 CDC37Q16543 378 aaPredicted RBP17.08■□□□□ 0.32
SSR4-206ENST00000460616 NRXN2Q9P2S2 1712 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 TRAPPC3O43617 180 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 SERPINB2P05120 415 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 HSPA9P38646 679 aaKnown RBP17.07■□□□□ 0.32
SSR4-206ENST00000460616 CTSWP56202 376 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 R3HDM1Q15032 1099 aaKnown RBP17.07■□□□□ 0.32
SSR4-206ENST00000460616 E2F5Q15329 346 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 SPRED3Q2MJR0 410 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 PRR5LQ6MZQ0 368 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 MIGA1Q8NAN2 632 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 FAXDC2Q96IV6 333 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 KBTBD4Q9NVX7 518 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 A0A1B0GUA9 196 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 PP2D1A8MPX8 630 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 EPHB6O15197 1021 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 NEBLO76041 1014 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 MMP10P09238 476 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 PAX7P23759 505 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 SLC8A1P32418 973 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 UBA7P41226 1012 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 CLNS1AP54105 237 aaKnown RBP17.07■□□□□ 0.32
SSR4-206ENST00000460616 PPP2R5AQ15172 486 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 LRCH2Q5VUJ6 765 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 DTHD1Q6ZMT9 781 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 RRAGAQ7L523 313 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 GPIHBP1Q8IV16 184 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 LPIN2Q92539 896 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 SEC16BQ96JE7 1060 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 MMRN2Q9H8L6 949 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 PLCB1Q9NQ66 1216 aa17.07■□□□□ 0.32
SSR4-206ENST00000460616 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 PPP1R12AO14974 1030 aaPredicted RBP17.06■□□□□ 0.32
SSR4-206ENST00000460616 NKRFO15226 690 aaKnown RBP eCLIP17.06■□□□□ 0.32
SSR4-206ENST00000460616 PDE8AO60658 829 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 CALM1P0DP23 149 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 CALM2P0DP24 149 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 CALM3P0DP25 149 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 ERCC3P19447 782 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 SCTRP47872 440 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 DNA2P51530 1060 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 GFPT1Q06210 699 aaPredicted RBP17.06■□□□□ 0.32
SSR4-206ENST00000460616 IFFO1Q0D2I5 559 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 TROAPQ12815 778 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 RASGRF1Q13972 1273 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 QPCTQ16769 361 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 LRIG3Q6UXM1 1119 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 TMTC3Q6ZXV5 915 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
SSR4-206ENST00000460616 LEMD3Q9Y2U8 911 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 LRRC53A6NM62 1247 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 ECM2O94769 699 aaPredicted RBP17.06■□□□□ 0.32
SSR4-206ENST00000460616 PUM3Q15397 648 aaKnown RBP17.06■□□□□ 0.32
SSR4-206ENST00000460616 ODF2Q5BJF6 829 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 NLGN1Q8N2Q7 840 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 CNBD1Q8NA66 436 aa17.06■□□□□ 0.32
SSR4-206ENST00000460616 PDE4DQ08499 809 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 VWA3BQ502W6 1294 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 TPTE2Q6XPS3 522 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 FMNL3Q8IVF7 1028 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 CACNA2D3Q8IZS8 1091 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 SRBD1Q8N5C6 995 aaKnown RBP17.05■□□□□ 0.32
SSR4-206ENST00000460616 CCDC47Q96A33 483 aaKnown RBP17.05■□□□□ 0.32
SSR4-206ENST00000460616 ATP6V0A4Q9HBG4 840 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 SLC12A6Q9UHW9 1150 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 SIK3Q9Y2K2 1263 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 GRID2IPA4D2P6 1211 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 SCG2P13521 617 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 TMOD1P28289 359 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 HSD17B3P37058 310 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 RNASE9P60153 205 aaKnown RBP17.05■□□□□ 0.32
SSR4-206ENST00000460616 STK4Q13043 487 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 XRCC4Q13426 336 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 LACTB2Q53H82 288 aaPredicted RBP17.05■□□□□ 0.32
SSR4-206ENST00000460616 CCDC84Q86UT8 332 aaPredicted RBP17.05■□□□□ 0.32
SSR4-206ENST00000460616 TBC1D22AQ8WUA7 517 aa17.05■□□□□ 0.32
SSR4-206ENST00000460616 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.05■□□□□ 0.32
SSR4-206ENST00000460616 NYXQ9GZU5 481 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms