RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 HLA-CQ95604 372 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 RAD9AQ99638 391 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 KATNAL1Q9BW62 490 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 MRVI1Q9Y6F6 885 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 XIRP2A4UGR9 3374 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 TRANK1O15050 2925 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 BDP1A6H8Y1 2624 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 PALM3A6NDB9 673 aaPredicted RBP14.35□□□□□ -0.11
GPNMB-204ENST00000459927 PPP1R11O60927 126 aaPredicted RBP14.35□□□□□ -0.11
GPNMB-204ENST00000459927 GJB5O95377 273 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 TGFB3P10600 412 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 HOXD8P13378 290 aaPredicted RBP14.35□□□□□ -0.11
GPNMB-204ENST00000459927 DEFB103AP81534 67 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 HIC1Q14526 733 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 SEC23AQ15436 765 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 CELF3Q5SZQ8 465 aaKnown RBP14.35□□□□□ -0.11
GPNMB-204ENST00000459927 IFIT1BQ5T764 474 aaKnown RBP14.35□□□□□ -0.11
GPNMB-204ENST00000459927 PDCD2LQ9BRP1 358 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 UBAC1Q9BSL1 405 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 CNNM2Q9H8M5 875 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 SUGCTQ9HAC7 445 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 MAD2L2Q9UI95 211 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 PCDHA1Q9Y5I3 950 aa14.35□□□□□ -0.11
GPNMB-204ENST00000459927 RBAK-RBAKDNI3L0D1 243 aa14.34□□□□□ -0.11
GPNMB-204ENST00000459927 ZBTB5O15062 677 aa14.34□□□□□ -0.11
GPNMB-204ENST00000459927 F2P00734 622 aa14.34□□□□□ -0.11
GPNMB-204ENST00000459927 ERVK-21P61565 698 aa14.34□□□□□ -0.11
GPNMB-204ENST00000459927 MBTPS1Q14703 1052 aa14.34□□□□□ -0.11
GPNMB-204ENST00000459927 HSDL1Q3SXM5 330 aa14.34□□□□□ -0.11
GPNMB-204ENST00000459927 CYB5R4Q7L1T6 521 aa14.34□□□□□ -0.11
GPNMB-204ENST00000459927 WNT8BQ93098 351 aa14.34□□□□□ -0.11
GPNMB-204ENST00000459927 C16orf70Q9BSU1 422 aa14.34□□□□□ -0.11
GPNMB-204ENST00000459927 C1QTNF1Q9BXJ1 281 aa14.34□□□□□ -0.11
GPNMB-204ENST00000459927 EPHX3Q9H6B9 360 aa14.34□□□□□ -0.11
GPNMB-204ENST00000459927 MYH6P13533 1939 aa14.33□□□□□ -0.11
GPNMB-204ENST00000459927 EFCAB14O75071 495 aa14.33□□□□□ -0.12
GPNMB-204ENST00000459927 HOXA13P31271 388 aaPredicted RBP14.33□□□□□ -0.12
GPNMB-204ENST00000459927 PGM5Q15124 567 aa14.33□□□□□ -0.12
GPNMB-204ENST00000459927 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.33□□□□□ -0.12
GPNMB-204ENST00000459927 ZFP91Q96JP5 570 aaPredicted RBP14.33□□□□□ -0.12
GPNMB-204ENST00000459927 SPATA33Q96N06 139 aa14.33□□□□□ -0.12
GPNMB-204ENST00000459927 TGS1Q96RS0 853 aaKnown RBP14.33□□□□□ -0.12
GPNMB-204ENST00000459927 BCAS3Q9H6U6 928 aa14.33□□□□□ -0.12
GPNMB-204ENST00000459927 RIOX1Q9H6W3 641 aa14.33□□□□□ -0.12
GPNMB-204ENST00000459927 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.32□□□□□ -0.12
GPNMB-204ENST00000459927 LINC01553A4QN01 128 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 RSPH10B2B2RC85 870 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 GCOM1H8Y6P7 765 aaPredicted RBP14.32□□□□□ -0.12
GPNMB-204ENST00000459927 SORBS3O60504 671 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 LGR5O75473 907 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 GGPS1O95749 300 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 RSPH10BP0C881 870 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 POLR2MP0CAP2 368 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 ZNF286BP0CG31 522 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 TRAF1Q13077 416 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 SLC35G1Q2M3R5 365 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 FAM117BQ6P1L5 589 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 DBF4BQ8NFT6 615 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 IL25Q9H293 177 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 MLXIPQ9HAP2 919 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 INSL6Q9Y581 213 aa14.32□□□□□ -0.12
GPNMB-204ENST00000459927 BAZ2BQ9UIF8 2168 aaKnown RBP14.32□□□□□ -0.12
GPNMB-204ENST00000459927 PTPRSQ13332 1948 aa14.31□□□□□ -0.12
GPNMB-204ENST00000459927 H3BRB1 525 aa14.31□□□□□ -0.12
GPNMB-204ENST00000459927 SERINC5Q86VE9 423 aa14.31□□□□□ -0.12
GPNMB-204ENST00000459927 FCHSD1Q86WN1 690 aa14.31□□□□□ -0.12
GPNMB-204ENST00000459927 IL31RAQ8NI17 732 aa14.31□□□□□ -0.12
GPNMB-204ENST00000459927 EXOC6Q8TAG9 804 aa14.31□□□□□ -0.12
GPNMB-204ENST00000459927 GPKOWQ92917 476 aaPredicted RBP eCLIP14.31□□□□□ -0.12
GPNMB-204ENST00000459927 PIGSQ96S52 555 aa14.31□□□□□ -0.12
GPNMB-204ENST00000459927 RNPEPQ9H4A4 650 aa14.31□□□□□ -0.12
GPNMB-204ENST00000459927 TUT1Q9H6E5 874 aaKnown RBP14.31□□□□□ -0.12
GPNMB-204ENST00000459927 MTUS1Q9ULD2 1270 aa14.31□□□□□ -0.12
GPNMB-204ENST00000459927 PNMA6FA0A0J9YX94 578 aa14.3□□□□□ -0.12
GPNMB-204ENST00000459927 CYTH3O43739 400 aa14.3□□□□□ -0.12
GPNMB-204ENST00000459927 CCND2P30279 289 aa14.3□□□□□ -0.12
GPNMB-204ENST00000459927 THPOP40225 353 aa14.3□□□□□ -0.12
GPNMB-204ENST00000459927 MKRN4PQ13434 485 aaPredicted RBP14.3□□□□□ -0.12
GPNMB-204ENST00000459927 GRM4Q14833 912 aa14.3□□□□□ -0.12
GPNMB-204ENST00000459927 PLEKHG4Q58EX7 1191 aa14.3□□□□□ -0.12
GPNMB-204ENST00000459927 GDPD5Q8WTR4 605 aa14.3□□□□□ -0.12
GPNMB-204ENST00000459927 ATP6V0A1Q93050 837 aa14.3□□□□□ -0.12
GPNMB-204ENST00000459927 LRFN3Q9BTN0 628 aa14.3□□□□□ -0.12
GPNMB-204ENST00000459927 SENP2Q9HC62 589 aa14.3□□□□□ -0.12
GPNMB-204ENST00000459927 TANC1Q9C0D5 1861 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 C17orf102A2RUQ5 167 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 SPATA31C2B4DYI2 1134 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 IFIT3O14879 490 aaKnown RBP14.29□□□□□ -0.12
GPNMB-204ENST00000459927 TREHO43280 583 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 UBA1P22314 1058 aaKnown RBP14.29□□□□□ -0.12
GPNMB-204ENST00000459927 HOXC8P31273 242 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 ICAM3P32942 547 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 MRPS9P82933 396 aaKnown RBP14.29□□□□□ -0.12
GPNMB-204ENST00000459927 HTRA4P83105 476 aaPredicted RBP14.29□□□□□ -0.12
GPNMB-204ENST00000459927 TROAPQ12815 778 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 TRDNQ13061 729 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 HOMER1Q86YM7 354 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 USP26Q9BXU7 913 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 OSBPL7Q9BZF2 842 aa14.29□□□□□ -0.12
GPNMB-204ENST00000459927 RTEL1Q9NZ71 1219 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms