RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 FLAD1Q8NFF5 587 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 GOLGA5Q8TBA6 731 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 MKL1Q969V6 931 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 MBOAT7Q96N66 472 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 NOX5Q96PH1 765 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 PNMA5Q96PV4 448 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 PLIN2Q99541 437 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 SEMA6BQ9H3T3 888 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 JMJD4Q9H9V9 463 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 VAT1LQ9HCJ6 419 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 PANK4Q9NVE7 773 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 TRPC5Q9UL62 973 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-202ENST00000459727 PCDHA13Q9Y5I0 950 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 FRMPD2Q68DX3 1309 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-202ENST00000459727 GRID2IPA4D2P6 1211 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 RNF225M0QZC1 329 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-202ENST00000459727 CES2O00748 559 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 CETN3O15182 167 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 POLR3GO15318 223 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-202ENST00000459727 RHOXF2BP0C7M4 288 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 FCER1AP12319 257 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 AKR1B1P15121 316 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 RPL13P26373 211 aaKnown RBP9.78□□□□□ -0.84
HDAC3-202ENST00000459727 TNFRSF8P28908 595 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 APBA1Q02410 837 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 COASYQ13057 564 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 CCDC181Q5TID7 509 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 SFMBT2Q5VUG0 894 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 PDXDC1Q6P996 788 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 PODNQ7Z5L7 613 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 C2CD5Q86YS7 1000 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 ZC3H3Q8IXZ2 948 aaKnown RBP9.78□□□□□ -0.84
HDAC3-202ENST00000459727 LRRC47Q8N1G4 583 aaKnown RBP9.78□□□□□ -0.84
HDAC3-202ENST00000459727 NLGN1Q8N2Q7 840 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 CCDC24Q8N4L8 307 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.78□□□□□ -0.848e-7■■■■■ 32.1
HDAC3-202ENST00000459727 FAM20AQ96MK3 541 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 ZDHHC15Q96MV8 337 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 PNKPQ96T60 521 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 RHOXF2Q9BQY4 288 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 CRACR2AQ9BSW2 395 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 UBA5Q9GZZ9 404 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 ZSWIM4Q9H7M6 989 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 MMRN2Q9H8L6 949 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 EHMT1Q9H9B1 1298 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 METTL14Q9HCE5 456 aaKnown RBP9.78□□□□□ -0.84
HDAC3-202ENST00000459727 ABCB6Q9NP58 842 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 SLC39A2Q9NP94 309 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 GPCPD1Q9NPB8 672 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 JADE2Q9NQC1 790 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 AGPAT5Q9NUQ2 364 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 USP40Q9NVE5 1235 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 POLLQ9UGP5 575 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 ATF5Q9Y2D1 282 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-202ENST00000459727 UTRNP46939 3433 aa9.78□□□□□ -0.84
HDAC3-202ENST00000459727 FRMD3A2A2Y4 597 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 BTNL10A8MVZ5 291 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 POLRMTO00411 1230 aaKnown RBP9.77□□□□□ -0.85
HDAC3-202ENST00000459727 SLC16A3O15427 465 aaKnown RBP9.77□□□□□ -0.85
HDAC3-202ENST00000459727 SLC37A4O43826 429 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 CALUO43852 315 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-202ENST00000459727 COBLO75128 1261 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 RPS6KA5O75582 802 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 GFPT2O94808 682 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 TDP2O95551 362 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 ATP1A1P05023 1023 aaKnown RBP9.77□□□□□ -0.85
HDAC3-202ENST00000459727 KRT18P05783 430 aaKnown RBP9.77□□□□□ -0.85
HDAC3-202ENST00000459727 MUTP22033 750 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 SHMT1P34896 483 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 SLC1A4P43007 532 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 MAGEA1P43355 309 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 VSNL1P62760 191 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 NNTQ13423 1086 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 PICALMQ13492 652 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 MEX3CQ5U5Q3 659 aaKnown RBP9.77□□□□□ -0.85
HDAC3-202ENST00000459727 TMEM179Q6ZVK1 233 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 STXBP4Q6ZWJ1 553 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 VPS36Q86VN1 386 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 GMCL1P1Q8NEA9 526 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 GMCL1Q96IK5 515 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 AMNQ9BXJ7 453 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 TANGO6Q9C0B7 1094 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 KCNMB3Q9NPA1 279 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 TMEM260Q9NX78 707 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 PI4KBQ9UBF8 816 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC3-202ENST00000459727 GREB1LQ9C091 1923 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-202ENST00000459727 UBE4BO95155 1302 aa9.77□□□□□ -0.85
HDAC3-202ENST00000459727 POTEMA6NI47 508 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 RASSF10A6NK89 507 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 SPDYE3A6NKU9 549 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 TRAF5O00463 557 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 MPHOSPH10O00566 681 aaKnown RBP9.76□□□□□ -0.85
HDAC3-202ENST00000459727 PPP1R12BO60237 982 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-202ENST00000459727 PLA2G4BP0C869 781 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 GAP43P17677 238 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 KCNA4P22459 653 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 EIF4A3P38919 411 aaKnown RBP9.76□□□□□ -0.85
HDAC3-202ENST00000459727 Q4G0T1 1027 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 CFAP221Q4G0U5 840 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms