RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 SEMA3FQ13275 785 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 MTMR1Q13613 665 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 CCDC144BQ3MJ40 725 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 SLC9C1Q4G0N8 1177 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 TPRNQ4KMQ1 711 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 CEP55Q53EZ4 464 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 MYSM1Q5VVJ2 828 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 MCTP2Q6DN12 878 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 CHRDL2Q6WN34 429 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 NLRX1Q86UT6 975 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 POTEDQ86YR6 584 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 SLAIN1Q8ND83 568 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 MORC4Q8TE76 937 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 PXYLP1Q8TE99 480 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 MPHOSPH6Q99547 160 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 ABHD16BQ9H3Z7 469 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 JADE2Q9NQC1 790 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 KCNH7Q9NS40 1196 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 DDX25Q9UHL0 483 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 NOL7Q9UMY1 257 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 SZT2Q5T011 3432 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 SYNGAP1Q96PV0 1343 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 SPATA31C2B4DYI2 1134 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 MEIS1O00470 390 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 MSH4O15457 936 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 MARCH6O60337 910 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 MYCNP04198 464 aaPredicted RBP9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 TXNP10599 105 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 CYBAP13498 195 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 SMPD1P17405 629 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 CIITAP33076 1130 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 TNFAIP2Q03169 654 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 DNM1Q05193 864 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 BRAPQ7Z569 592 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 MSL3Q8N5Y2 521 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 LENG9Q96B70 501 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 ARMC5Q96C12 935 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 INPP4AQ96PE3 977 aaPredicted RBP9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 UNC93B1Q9H1C4 597 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 TMEM60Q9H2L4 133 aa9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 ZSCAN16Q9H4T2 348 aaPredicted RBP9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 AGO4Q9HCK5 861 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 DDX41Q9UJV9 622 aaKnown RBP9.85□□□□□ -0.83
CLTCL1-204ENST00000458188 CYP3A7-CYP3A51PA0A087WV96 503 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 DYNC1LI2O43237 492 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 NCLP19338 710 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 CYP3A7P24462 503 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 TXKP42681 527 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 NUCB2P80303 420 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 ITGB3BPQ13352 177 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 SF3A1Q15459 793 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 Q4G0T1 1027 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 RILPL1Q5EBL4 403 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 PPP4R3AQ6IN85 833 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 XRRA1Q6P2D8 792 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 CYFIP1Q7L576 1253 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 TRMT44Q8IYL2 757 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 DPF3Q92784 378 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 HAS1Q92839 578 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 USP28Q96RU2 1077 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 ZNF577Q9BSK1 485 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 VTA1Q9NP79 307 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 CHMP5Q9NZZ3 219 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 FAM184BQ9ULE4 1060 aa9.84□□□□□ -0.83
CLTCL1-204ENST00000458188 FIBPO43427 364 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 CHMP2AO43633 222 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 NEMFO60524 1076 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 GGPS1O95749 300 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 PGK1P00558 417 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 CCL5P13501 91 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 UBA1P22314 1058 aaKnown RBP9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 MARCKSP29966 332 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 BEX3Q00994 111 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 PTGDRQ13258 359 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 TTLL4Q14679 1199 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 IL17AQ16552 155 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 GNPTABQ3T906 1256 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 MAP3K21Q5TCX8 1036 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 IQSEC1Q6DN90 963 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 CCDC62Q6P9F0 684 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 TEX2Q8IWB9 1127 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 C4orf32Q8N8J7 132 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 SCFD2Q8WU76 684 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 GPRASP2Q96D09 838 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 MBOAT7Q96N66 472 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 RNF208Q9H0X6 261 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 MLXIPQ9HAP2 919 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 GDPD2Q9HCC8 539 aa9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 HMX1Q9NP08 348 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-204ENST00000458188 PLXNB2O15031 1838 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 LOC102724159A0A0B4J2E5 919 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 RBM47A0AV96 593 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 MYADML2A6NDP7 307 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 IPO5O00410 1097 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 DHX15O43143 795 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 STAM2O75886 525 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 AKR1A1P14550 325 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 KCNA2P16389 499 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 ICAM3P32942 547 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms