RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 IGSF22Q8N9C0 903 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 FERMT2Q96AC1 680 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 TMEM121BQ9BXQ6 578 aaPredicted RBP9.89□□□□□ -0.83
RIF1-208ENST00000457745 TEX13BQ9BXU2 312 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 SPATC1LQ9H0A9 340 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 TNMDQ9H2S6 317 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 EFCC1Q9HA90 598 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 CYP39A1Q9NYL5 469 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 PKD2L1Q9P0L9 805 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 CEP131Q9UPN4 1083 aa9.89□□□□□ -0.83
RIF1-208ENST00000457745 WDR81Q562E7 1941 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 PLXNA1Q9UIW2 1896 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 SPDYE3A6NKU9 549 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 RBAK-RBAKDNI3L0D1 243 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 BIN1O00499 593 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 GTPBP6O43824 516 aaPredicted RBP9.88□□□□□ -0.83
RIF1-208ENST00000457745 FOSP01100 380 aaPredicted RBP9.88□□□□□ -0.83
RIF1-208ENST00000457745 SLC10A3P09131 477 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 PLCG1P19174 1290 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 ERCC3P19447 782 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 USP11P51784 963 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 CAP1Q01518 475 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 TYRO3Q06418 890 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 ITGB3BPQ13352 177 aaPredicted RBP9.88□□□□□ -0.83
RIF1-208ENST00000457745 PGM5Q15124 567 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 Q4G0T1 1027 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 TMEM63BQ5T3F8 832 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 ARL6IP4Q66PJ3 421 aaKnown RBP9.88□□□□□ -0.83
RIF1-208ENST00000457745 ISM2Q6H9L7 571 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 JMYQ8N9B5 988 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 PDCD2LQ9BRP1 358 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 WDR11Q9BZH6 1224 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 ACAD9Q9H845 621 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 GPBP1L1Q9HC44 474 aaPredicted RBP9.88□□□□□ -0.83
RIF1-208ENST00000457745 PXMP2Q9NR77 195 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 BLOC1S4Q9NUP1 217 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 UBIAD1Q9Y5Z9 338 aa9.88□□□□□ -0.83
RIF1-208ENST00000457745 DOCK3Q8IZD9 2030 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 MEIS1O00470 390 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 DHX15O43143 795 aaKnown RBP9.87□□□□□ -0.83
RIF1-208ENST00000457745 AP5Z1O43299 807 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 ATP9AO75110 1047 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 MED24O75448 989 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 BMP15O95972 392 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 PGK2P07205 417 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 AFMP43652 599 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 DPYDQ12882 1025 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 TMEM119Q4V9L6 283 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 MOXD1Q6UVY6 613 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 B3GNT9Q6UX72 402 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 DTHD1Q6ZMT9 781 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 ANKRD23Q86SG2 305 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 PLA2G4DQ86XP0 818 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 ANKRD13CQ8N6S4 541 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 RNF214Q8ND24 703 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 SLC5A5Q92911 643 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 MARVELD3Q96A59 401 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 PAGE5Q96GU1 130 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 MED15Q96RN5 788 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 CCSER1Q9C0I3 900 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 GLT8D2Q9H1C3 349 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 BLZF1Q9H2G9 400 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 TTC12Q9H892 705 aaPredicted RBP9.87□□□□□ -0.83
RIF1-208ENST00000457745 HOXC10Q9NYD6 342 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 WRAP73Q9P2S5 460 aaPredicted RBP9.87□□□□□ -0.83
RIF1-208ENST00000457745 TLL2Q9Y6L7 1015 aa9.87□□□□□ -0.83
RIF1-208ENST00000457745 TESPA1A2RU30 521 aaPredicted RBP9.86□□□□□ -0.83
RIF1-208ENST00000457745 SORBS3O60504 671 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 KINO60870 393 aaKnown RBP9.86□□□□□ -0.83
RIF1-208ENST00000457745 PSMD10O75832 226 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 SPATA31C1P0DKV0 1188 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 CETPP11597 493 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 MYCLP12524 364 aaPredicted RBP9.86□□□□□ -0.83
RIF1-208ENST00000457745 GCFC2P16383 781 aaKnown RBP9.86□□□□□ -0.83
RIF1-208ENST00000457745 CTGFP29279 349 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 LONP1P36776 959 aaKnown RBP9.86□□□□□ -0.83
RIF1-208ENST00000457745 ZNF157P51786 506 aaPredicted RBP9.86□□□□□ -0.83
RIF1-208ENST00000457745 GTF2A2P52657 109 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 ORC2Q13416 577 aaPredicted RBP9.86□□□□□ -0.83
RIF1-208ENST00000457745 ZRSR1Q15695 479 aaKnown RBP9.86□□□□□ -0.83
RIF1-208ENST00000457745 TKFCQ3LXA3 575 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 DPCR1Q3MIW9 517 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 RGMBQ6NW40 437 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 FASTKD5Q7L8L6 764 aaKnown RBP9.86□□□□□ -0.83
RIF1-208ENST00000457745 CABP7Q86V35 215 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 NCAPG2Q86XI2 1143 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 FAM133AQ8N9E0 248 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 TIGD1Q96MW7 591 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 RMDN3Q96TC7 470 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 MXRA8Q9BRK3 442 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 TUBE1Q9UJT0 475 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 MAN1B1Q9UKM7 699 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 CTDP1Q9Y5B0 961 aaPredicted RBP9.86□□□□□ -0.83
RIF1-208ENST00000457745 PCDHA5Q9Y5H7 936 aa9.86□□□□□ -0.83
RIF1-208ENST00000457745 DNAJC25-GNG10A0A024R161 153 aa9.85□□□□□ -0.83
RIF1-208ENST00000457745 POTEB3A0JP26 581 aa9.85□□□□□ -0.83
RIF1-208ENST00000457745 UNCXA6NJT0 531 aa9.85□□□□□ -0.83
RIF1-208ENST00000457745 DDX39AO00148 427 aaKnown RBP9.85□□□□□ -0.83
RIF1-208ENST00000457745 LAD1O00515 517 aa9.85□□□□□ -0.83
RIF1-208ENST00000457745 ZBTB39O15060 712 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms